; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G026510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G026510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRRM domain-containing protein
Genome locationCmo_Chr04:19272894..19275853
RNA-Seq ExpressionCmoCh04G026510
SyntenyCmoCh04G026510
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602267.1 MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-11398.58Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKAKKAMKKKL+KATSL+SNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKF ED
Subjt:  QPTPKKIKFDED

XP_008456579.1 PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]5.0e-10893.4Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKAKKAMKKKL KAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EF+
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]1.9e-115100Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022990457.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]7.4e-11296.7Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKAKKAMKKKL+KATSL+SN+ ESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYIEFD
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERK+HNKERTLGEHRKLVERILKRNQARQKRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_023525015.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pepo]1.6e-11499.53Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKK NKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

TrEMBL top hitse value%identityAlignment
A0A0A0KCE3 RRM domain-containing protein6.5e-10691.51Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKA+KAMKKKLNKAT L S+KKESADFLPLEGGPGRKL  QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGY+EF+
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c2.4e-10893.4Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKAKKAMKKKL KAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EF+
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like9.1e-116100Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JIS9 uncharacterized RNA-binding protein C1827.05c-like3.6e-11296.7Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKAKKAMKKKL+KATSL+SN+ ESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYIEFD
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERK+HNKERTLGEHRKLVERILKRNQARQKRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like7.7e-10791.51Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD
        MGAKAKKAMKKKL+KATS LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYI RIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERK+HNKERTL EH+KLVERILKR+QAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c4.5e-2738.06Show/hide
Query:  RKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW
        +K+   K L+    VLY+ R+PHGF+EK+M  +F QFG V RLR++RN+KTG S+H+ +IEF+S +VA +VA++MHNYLLY  +L+  +I  + VH  ++
Subjt:  RKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW

Query:  KGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYE
        KG +     +  + + R +H K  +  +  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein8.4e-2636.76Show/hide
Query:  ATSLLS-NKKESADFLPLEGGPGRKLPAQKPLES-TATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMH
        A  LLS N +E A F        R+   Q+  +  T  V+Y+  +P   +E ++  +F QFG V R R++R+KKTG S+ +G++EF+S +VAKI A++M+
Subjt:  ATSLLS-NKKESADFLPLEGGPGRKLPAQKPLES-TATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMH

Query:  NYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELER-KKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIV
        NYL  E +LK H I PE VH +L++ +   H+P         K++N+ R+L +  ++ ER  K+ +  +KR+   GIDY  P +V
Subjt:  NYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELER-KKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like2.2e-2641.96Show/hide
Query:  VLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSE
        V+YI  IP   +E ++  +F QFG V RLR++R+KKTG S+ + Y+EF+  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G   +        
Subjt:  VLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSE

Query:  LERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECP
        + R  +NK R+  E +K+ +R+L +    +KR+   GIDY+ P
Subjt:  LERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like2.4e-2537.97Show/hide
Query:  MKKKLNKATSLLS-NKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKI
        M ++L ++  LLS + K   DF        RK   +K    T  V+YI  IP    E +++ +F QFG V RLR++R+KKTG S+ + Y+E++  EVAKI
Subjt:  MKKKLNKATSLLS-NKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKI

Query:  VADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECP
        VAD+M+NYL  E +LK   + PE VHP+L+ G N R        + R  +N +R   E +K+ +R++ +    +KR+   GIDY+ P
Subjt:  VADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein4.5e-2737.97Show/hide
Query:  LLSNKKESADFLPLEGGPGRKLPAQKPLESTAT-----VLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMH
        L  N KE A+F        +K+   K    T       VLY+  +P G FE +++ +F QFGKV RLR++R+KKTG S+ +G++EF+  EVAKIVA++M+
Subjt:  LLSNKKESADFLPLEGGPGRKLPAQKPLESTAT-----VLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMH

Query:  NYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV
        NYL+ E I+K H+I PE VH KL+ G         +  + R  +NK  T  + +K+  ++L +    +KR+ A GIDY+ P     +
Subjt:  NYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSV

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-0634.07Show/hide
Query:  GRKLPAQKPLESTATV-LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHL
        G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG S+ FG+I +DS   A+   ++M+   L    LKV L
Subjt:  GRKLPAQKPLESTATV-LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHL

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-0634.07Show/hide
Query:  GRKLPAQKPLESTATV-LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHL
        G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG S+ FG+I +DS   A+   ++M+   L    LKV L
Subjt:  GRKLPAQKPLESTATV-LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHL

AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.5e-0627.88Show/hide
Query:  LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSEL
        +Y+  IP    E +++GF G  G+V  +RI R K +G  + + ++ F S ++A    D+++N       +K      +H   +L+ G    ++P NW E 
Subjt:  LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSEL

Query:  ERKK
        + KK
Subjt:  ERKK

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-0628.18Show/hide
Query:  PAQKPLESTATV--LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMH-----------------NYLLYEHI
        P ++ +ES + +  L+I  I     E+ ++ +FG++G +    I R++ TG++R FG+I F  P VA+ V    H                   +L  H 
Subjt:  PAQKPLESTATV--LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMH-----------------NYLLYEHI

Query:  LKVHLIAPEH
          +HLI+P H
Subjt:  LKVHLIAPEH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-7159.73Show/hide
Query:  MGAKAKKAMKKKLNKATS--------LLSNKKESADFLPLEGGPGRKLP-AQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS
        MGAKAKKA+KK + K  +        L  N K SADFLPLEGGP RK P    PL++ ATVLYI RIPHGF+E E+E FF QFG VKR+R+ARNKKTGKS
Subjt:  MGAKAKKAMKKKLNKATS--------LLSNKKESADFLPLEGGPGRKLP-AQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS

Query:  RHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDY
        +HFG+I+F+ PEVA+I A +M++YLL EH+LKVH+I PE+V P LW+GF     P++  ++ER++ NKERTL EHRK++++I+K++Q R+KRI AAGI+Y
Subjt:  RHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDY

Query:  ECPEIVGSVQPTPKKIKFDED
        ECPE+VG+ QP PK+IKF E+
Subjt:  ECPEIVGSVQPTPKKIKFDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAATAAGGCTACTTCTCTGTTATCCAACAAGAAGGAATCTGCCGATTTCTTGCCATTGGAGGGTGGTCCTGG
GCGTAAGTTACCGGCACAAAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGCTCGCATACCACATGGTTTCTTTGAGAAGGAGATGGAAGGGTTTTTCGGACAGT
TTGGGAAAGTCAAACGATTAAGAATTGCACGGAATAAAAAAACTGGGAAGTCGAGGCATTTTGGCTACATTGAGTTCGATTCTCCAGAGGTAGCAAAAATTGTAGCTGAT
TCTATGCATAACTATTTGTTGTACGAACACATTCTGAAAGTTCATCTAATTGCTCCCGAACATGTTCATCCCAAACTATGGAAAGGTTTTAACTATCGCCACATTCCCTT
AAACTGGTCTGAACTTGAACGTAAAAAGCATAACAAGGAAAGGACATTGGGTGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGAATCAGGCTAGACAGAAGAGGA
TAAGAGCTGCTGGGATTGATTACGAGTGCCCAGAAATTGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAGTTTGACGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
CATTGTTCACTTTCCGCTTACAATTTGCTGTGTCTGCACCGAGAAGTTTGTGGCAGTTTAGGGAATTCTAGGGGTTGATTCCCTTTTGCTTGAATTCAATGGGGGCTAAG
GCGAAGAAAGCTATGAAGAAGAAACTCAATAAGGCTACTTCTCTGTTATCCAACAAGAAGGAATCTGCCGATTTCTTGCCATTGGAGGGTGGTCCTGGGCGTAAGTTACC
GGCACAAAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGCTCGCATACCACATGGTTTCTTTGAGAAGGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTCA
AACGATTAAGAATTGCACGGAATAAAAAAACTGGGAAGTCGAGGCATTTTGGCTACATTGAGTTCGATTCTCCAGAGGTAGCAAAAATTGTAGCTGATTCTATGCATAAC
TATTTGTTGTACGAACACATTCTGAAAGTTCATCTAATTGCTCCCGAACATGTTCATCCCAAACTATGGAAAGGTTTTAACTATCGCCACATTCCCTTAAACTGGTCTGA
ACTTGAACGTAAAAAGCATAACAAGGAAAGGACATTGGGTGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGAATCAGGCTAGACAGAAGAGGATAAGAGCTGCTG
GGATTGATTACGAGTGCCCAGAAATTGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAGTTTGACGAAGATTAGAAGGAGCATCGAGTTCATTAAAGCTATAATATT
GTCACAATAGAGAGGAAGGATGGAAGAATGACGAGCCAGCCATTGCATCTTTCCAGTTTCTTATATGCTCTGGGAGGTAACCTTCTTGAATCTCCAAATTTTGATCTTTG
AAATTTTGTGTTGAACCCTTTTGTTTCTAAGAAACAGGAACTGAAATAGTATATTGTAGTTAGTTATTAATCTCCATTAGTAATAAATGTATGCCTATAAATGATAATCT
TTAAAGTAGTTTAGCCATTAAGACTTGACTCATTCAAAGTGCTTGCCATGCCATTATGAACCCAACGGTTTGATGTGATATAACCTTTTAGTTTTTGAAAATTCTGTTTA
TATATAAATTGAAATAGAAATTTAAGAAAAATAAGTGGGCCATGATTTAGTTAAATGCAAAGTGGGTTCATAAAATTAGTCACGGTGTTTGAAGCAATAAAGTAAGTGGT
GGTTTTCTTTCATTTTCTTCTTAATTCAACGGCAACCCTCTTCTTATAATTGGTGAC
Protein sequenceShow/hide protein sequence
MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVAD
SMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQARQKRIRAAGIDYECPEIVGSVQPTPKKIKFDED