; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G026690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G026690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGlycine-rich RNA-binding family protein
Genome locationCmo_Chr04:19415323..19418669
RNA-Seq ExpressionCmoCh04G026690
SyntenyCmoCh04G026690
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602289.1 Glycine-rich RNA-binding protein RZ1C, partial [Cucurbita argyrosperma subsp. sororia]1.3e-16299.65Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
        MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDRF GGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_022133790.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]6.7e-14892.39Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
        MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    DGGRYGDRD FDRRDDKYGS
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPS GDRF GGDRYDVSDRYPQNGYVKDRGGY+RDIGPRSGSDRYG+ GGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_022961758.1 glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata]3.3e-163100Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
        MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_022990423.1 glycine-rich RNA-binding protein RZ1C [Cucurbita maxima]2.8e-16299.31Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
        MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDRF GGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGR+YRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

XP_023544240.1 glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo]3.1e-16198.62Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
        MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYF+DRYPSAGDRF GGDRYDVSDRYPQNGYVK+RGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

TrEMBL top hitse value%identityAlignment
A0A0A0LQB5 Uncharacterized protein1.5e-14089.27Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
        MA+KDEYRIFVGGLSWN+SER+LENAF R+GK++ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GERIISVNKAEPKMEGDD E GFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRG DRSVGQDECFKCGRPGHWARDCPS GGGRG GRGSFSSRSRFD D RGDRFGGDRDRYVD+RY    +GGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDRFTG DRYDVSDRYPQNGYVKDR  YDRDIGPRSGSDRYG+ GGPGR+EGRSYRDR GPYDRPSR GRPSSY+RY
Subjt:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1BW59 glycine-rich RNA-binding protein RZ1C-like isoform X22.0e-12692.83Show/hide
Query:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSA
        MLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGGYSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS 
Subjt:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSA

Query:  GGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRG
        GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    DGGRYGDRD FDRRDDKYGSRDRYFDDRYPS GDRF GGDRYDVSDRYPQNGYVKDRG
Subjt:  GGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRG

Query:  GYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        GY+RDIGPRSGSDRYG+ GGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  GYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1BW89 glycine-rich RNA-binding protein RZ1C-like isoform X13.2e-14892.39Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
        MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    DGGRYGDRD FDRRDDKYGS
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPS GDRF GGDRYDVSDRYPQNGYVKDRGGY+RDIGPRSGSDRYG+ GGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1HB93 glycine-rich RNA-binding protein RZ1C-like1.6e-163100Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
        MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

A0A6J1JS04 glycine-rich RNA-binding protein RZ1C1.4e-16299.31Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
        MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
        RDRYFDDRYPSAGDRF GGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGR+YRDRPGPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B2.8e-7257.24Show/hide
Query:  EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGG
        E RIFVGGLSW+V+ER+LE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG E G ++ISVNKAEPK+ G+D +   +GGGYSS G
Subjt:  EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGG

Query:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRF-DGDSRGDRFGG-----------DRDRYVDDRYDGGRDGGRYGDRDRFDR
        + +          +DECFKC RPGHWARDCPS G  R R R   + RSR  D D   DR+G            + DRY+D R D  RDGGRY  RDRFD 
Subjt:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRF-DGDSRGDRFGG-----------DRDRYVDDRYDGGRDGGRYGDRDRFDR

Query:  RDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY
          DKY  RD Y  +RY   GDRF   DRY + + + +N Y      YDRD   R  SDRYG   GP R EGR YR RPGPYDRPSR GGRPSSYER+
Subjt:  RDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY

P49310 Glycine-rich RNA-binding protein GRP1A3.1e-2342.69Show/hide
Query:  MAAKD-EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGG
        MA+ D EYR FVGGL+W   +R LE AFS+YG++++++I+ +R+TGR RGFGF+TF D + M DAI  M+G +   R I+VN+A+ +  G        GG
Subjt:  MAAKD-EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGG

Query:  GYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGG----RGRGRGSFSSRSRFDGDSRGDRFGG
        GY SGG   +G GG    G       GR G +     S GGG    RG G G +    R DG   G  +GG
Subjt:  GYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGG----RGRGRGSFSSRSRFDGDSRGDRFGG

Q03250 Glycine-rich RNA-binding protein 71.7e-2141.49Show/hide
Query:  MAAKD-EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPK-MEGDDREPGFRG
        MA+ D EYR FVGGL+W   +R LE AF++YG +I+++I+ +R+TGR RGFGF+TF D + M DAI  M+G +   R I+VN+A+ +   G     G  G
Subjt:  MAAKD-EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPK-MEGDDREPGFRG

Query:  GGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYG
        GGY SGG   +  GG    G          G   R+    GGG   G G +SSR        G  +GG R R     Y GG +GG YG
Subjt:  GGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C3.6e-8060.78Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREP-GFRGG
        MAAK+  RIFVGGLS  V++R+LE AFSR+G I++ QIMLERDTGR RGFGFITFADRR MD++IREMHG +FG+R+ISVN+AEPK+  DD E  G RGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREP-GFRGG

Query:  ---GYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDG--DSRGDRFGG-----DRDRYVDDRYDGGRDGGRYGD
           GYS  G+ SFG GG     VG+DECFKCGR GHWARDCPSAGGGRG   G FSSR+   G  D R DR+       DR+RY+DDRYDG     RYG 
Subjt:  ---GYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDG--DSRGDRFGG-----DRDRYVDDRYDGGRDGGRYGD

Query:  RDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGGDRYD-VSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTG--GGP---GRYEGRSYRDRPG-PYDRPSRG
        RDRFD R + Y  RDRY  DRY +  DRF GGDRY   SDRYP   Y K R  ++RDI P +GSDRYG G  GGP   G  EGR +R R G PY+RPSR 
Subjt:  RDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGGDRYD-VSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTG--GGP---GRYEGRSYRDRPG-PYDRPSRG

Query:  GRPSSY
        G   +Y
Subjt:  GRPSSY

Q9LIN3 Glycine-rich RNA-binding protein RZ1A1.0e-3442.86Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDRE-PGFRG-
        M+   EYR F+GGL+W  S+R L +AF +YG ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P   G  R+  G RG 
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDRE-PGFRG-

Query:  -GGYS-SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRY--VDDRYDGGRDGGRYGDRDRFDRR
          GY     R S GRGG       +CFKCG+PGH+AR+CPS     G GR S S   R+   S+ DR+G   DRY   +DRY G +D       DR+  +
Subjt:  -GGYS-SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRY--VDDRYDGGRDGGRYGDRDRFDRR

Query:  DDKYGSRD----RYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSG
        DD+YGSRD    RY  DR   +G+R  GG   D   R    G    R  YDR   PR+G
Subjt:  DDKYGSRD----RYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.0e-7357.24Show/hide
Query:  EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGG
        E RIFVGGLSW+V+ER+LE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG E G ++ISVNKAEPK+ G+D +   +GGGYSS G
Subjt:  EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGG

Query:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRF-DGDSRGDRFGG-----------DRDRYVDDRYDGGRDGGRYGDRDRFDR
        + +          +DECFKC RPGHWARDCPS G  R R R   + RSR  D D   DR+G            + DRY+D R D  RDGGRY  RDRFD 
Subjt:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRF-DGDSRGDRFGG-----------DRDRYVDDRYDGGRDGGRYGDRDRFDR

Query:  RDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY
          DKY  RD Y  +RY   GDRF   DRY + + + +N Y      YDRD   R  SDRYG   GP R EGR YR RPGPYDRPSR GGRPSSYER+
Subjt:  RDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.0e-7357.24Show/hide
Query:  EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGG
        E RIFVGGLSW+V+ER+LE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG E G ++ISVNKAEPK+ G+D +   +GGGYSS G
Subjt:  EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGG

Query:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRF-DGDSRGDRFGG-----------DRDRYVDDRYDGGRDGGRYGDRDRFDR
        + +          +DECFKC RPGHWARDCPS G  R R R   + RSR  D D   DR+G            + DRY+D R D  RDGGRY  RDRFD 
Subjt:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRF-DGDSRGDRFGG-----------DRDRYVDDRYDGGRDGGRYGDRDRFDR

Query:  RDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY
          DKY  RD Y  +RY   GDRF   DRY + + + +N Y      YDRD   R  SDRYG   GP R EGR YR RPGPYDRPSR GGRPSSYER+
Subjt:  RDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY

AT2G21660.1 cold, circadian rhythm, and rna binding 21.2e-2241.49Show/hide
Query:  MAAKD-EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPK-MEGDDREPGFRG
        MA+ D EYR FVGGL+W   +R LE AF++YG +I+++I+ +R+TGR RGFGF+TF D + M DAI  M+G +   R I+VN+A+ +   G     G  G
Subjt:  MAAKD-EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPK-MEGDDREPGFRG

Query:  GGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYG
        GGY SGG   +  GG    G          G   R+    GGG   G G +SSR        G  +GG R R     Y GG +GG YG
Subjt:  GGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain7.4e-3642.86Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDRE-PGFRG-
        M+   EYR F+GGL+W  S+R L +AF +YG ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P   G  R+  G RG 
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDRE-PGFRG-

Query:  -GGYS-SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRY--VDDRYDGGRDGGRYGDRDRFDRR
          GY     R S GRGG       +CFKCG+PGH+AR+CPS     G GR S S   R+   S+ DR+G   DRY   +DRY G +D       DR+  +
Subjt:  -GGYS-SGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRY--VDDRYDGGRDGGRYGDRDRFDRR

Query:  DDKYGSRD----RYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSG
        DD+YGSRD    RY  DR   +G+R  GG   D   R    G    R  YDR   PR+G
Subjt:  DDKYGSRD----RYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.6e-8160.78Show/hide
Query:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREP-GFRGG
        MAAK+  RIFVGGLS  V++R+LE AFSR+G I++ QIMLERDTGR RGFGFITFADRR MD++IREMHG +FG+R+ISVN+AEPK+  DD E  G RGG
Subjt:  MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREP-GFRGG

Query:  ---GYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDG--DSRGDRFGG-----DRDRYVDDRYDGGRDGGRYGD
           GYS  G+ SFG GG     VG+DECFKCGR GHWARDCPSAGGGRG   G FSSR+   G  D R DR+       DR+RY+DDRYDG     RYG 
Subjt:  ---GYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDG--DSRGDRFGG-----DRDRYVDDRYDGGRDGGRYGD

Query:  RDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGGDRYD-VSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTG--GGP---GRYEGRSYRDRPG-PYDRPSRG
        RDRFD R + Y  RDRY  DRY +  DRF GGDRY   SDRYP   Y K R  ++RDI P +GSDRYG G  GGP   G  EGR +R R G PY+RPSR 
Subjt:  RDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGGDRYD-VSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTG--GGP---GRYEGRSYRDRPG-PYDRPSRG

Query:  GRPSSY
        G   +Y
Subjt:  GRPSSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGAAGGACGAGTACCGAATATTTGTTGGAGGACTCTCGTGGAACGTGTCGGAGCGTGAGCTTGAGAACGCTTTCAGCCGCTACGGCAAAATAATTGAAACTCA
GATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGATCGTCGAGGGATGGATGATGCAATAAGAGAGATGCATGGGCATGAATTTG
GTGAGCGGATTATCTCAGTAAATAAAGCTGAACCCAAGATGGAGGGAGATGATAGAGAGCCAGGTTTCAGGGGAGGAGGCTATTCATCTGGTGGTAGGGCTAGTTTTGGG
AGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTGTCCTTCAGCCGGAGGTGGACGTGGTAGGGGTAGAGG
TTCATTTTCATCGCGTTCTCGATTTGATGGTGATAGTCGTGGGGATCGTTTTGGAGGAGATCGTGACCGGTATGTCGATGACCGTTATGATGGAGGGCGAGATGGGGGGC
GCTACGGTGATAGAGATCGTTTTGACCGTAGGGATGACAAGTATGGAAGTCGAGACCGCTATTTTGACGACAGGTACCCATCTGCTGGAGATCGTTTTACAGGTGGTGAT
CGGTATGATGTTAGTGATCGATATCCTCAAAATGGCTACGTCAAAGACAGAGGTGGCTACGATAGGGATATTGGTCCCAGGAGTGGCAGTGATAGGTATGGTACTGGAGG
AGGTCCTGGCCGTTACGAGGGAAGAAGTTACAGAGATAGGCCAGGCCCTTACGACCGCCCAAGCAGGGGAGGACGACCGTCTTCCTACGAGCGCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCGAAGGACGAGTACCGAATATTTGTTGGAGGACTCTCGTGGAACGTGTCGGAGCGTGAGCTTGAGAACGCTTTCAGCCGCTACGGCAAAATAATTGAAACTCA
GATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGATCGTCGAGGGATGGATGATGCAATAAGAGAGATGCATGGGCATGAATTTG
GTGAGCGGATTATCTCAGTAAATAAAGCTGAACCCAAGATGGAGGGAGATGATAGAGAGCCAGGTTTCAGGGGAGGAGGCTATTCATCTGGTGGTAGGGCTAGTTTTGGG
AGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTGTCCTTCAGCCGGAGGTGGACGTGGTAGGGGTAGAGG
TTCATTTTCATCGCGTTCTCGATTTGATGGTGATAGTCGTGGGGATCGTTTTGGAGGAGATCGTGACCGGTATGTCGATGACCGTTATGATGGAGGGCGAGATGGGGGGC
GCTACGGTGATAGAGATCGTTTTGACCGTAGGGATGACAAGTATGGAAGTCGAGACCGCTATTTTGACGACAGGTACCCATCTGCTGGAGATCGTTTTACAGGTGGTGAT
CGGTATGATGTTAGTGATCGATATCCTCAAAATGGCTACGTCAAAGACAGAGGTGGCTACGATAGGGATATTGGTCCCAGGAGTGGCAGTGATAGGTATGGTACTGGAGG
AGGTCCTGGCCGTTACGAGGGAAGAAGTTACAGAGATAGGCCAGGCCCTTACGACCGCCCAAGCAGGGGAGGACGACCGTCTTCCTACGAGCGCTATTAA
Protein sequenceShow/hide protein sequence
MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFG
RGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGGD
RYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY