; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G027350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G027350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPlant protein 1589 of unknown function
Genome locationCmo_Chr04:19824429..19826376
RNA-Seq ExpressionCmoCh04G027350
SyntenyCmoCh04G027350
Gene Ontology termsGO:0032502 - developmental process (biological process)
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602346.1 hypothetical protein SDJN03_07579, partial [Cucurbita argyrosperma subsp. sororia]3.9e-44100Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK
        MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK

XP_022921429.1 uncharacterized protein LOC111429709 [Cucurbita moschata]1.0e-44100Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPKT
        MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPKT
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPKT

XP_022921441.1 uncharacterized protein LOC111429717 [Cucurbita moschata]3.5e-3789.47Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK
        MAD S ASYIHMVQHLIEKCLIFRMTKEECMDAL KHANISPVITSTVWTELEKENKEFFETYA+SQ +KDRMSE+ETSQMIQ+MI +SSKGDPK
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK

XP_022990503.1 uncharacterized protein LOC111487343 [Cucurbita maxima]2.6e-4092.63Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK
        MADSSSASYIHMVQHLIEKCLIFRMTKEECMDAL KHANISPVITSTVWTELEKENKEFFE YA++QSNKD MSE+ET+QMIQRMILDSSKGDPK
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK

XP_023526498.1 uncharacterized protein LOC111789981 [Cucurbita pepo subsp. pepo]4.3e-4397.89Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK
        MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFE YAESQSNKDRMSE+ETSQMIQRMILDSSKGDPK
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK

TrEMBL top hitse value%identityAlignment
A0A6J1BWN4 uncharacterized protein LOC111006373 isoform X11.7e-3788.42Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK
        MAD SSASYIHMVQHLIEKCLIF MTKEECMDAL KHANI P+ITSTVW+ELEKENKEFFE YA+SQSNKDRMSE+ETSQMIQ+MI DSSKGDPK
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK

A0A6J1E0G0 uncharacterized protein LOC1114297095.0e-45100Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPKT
        MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPKT
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPKT

A0A6J1E1E4 uncharacterized protein LOC1114297171.7e-3789.47Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK
        MAD S ASYIHMVQHLIEKCLIFRMTKEECMDAL KHANISPVITSTVWTELEKENKEFFETYA+SQ +KDRMSE+ETSQMIQ+MI +SSKGDPK
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK

A0A6J1JTG8 uncharacterized protein LOC1114873431.3e-4092.63Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK
        MADSSSASYIHMVQHLIEKCLIFRMTKEECMDAL KHANISPVITSTVWTELEKENKEFFE YA++QSNKD MSE+ET+QMIQRMILDSSKGDPK
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPK

A0A7N2MES4 Uncharacterized protein1.0e-3485.71Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSK
        M DSSSASYIH+VQHLIEKCLIFRMTKEECM+AL KHANI PVITSTVW ELEKENKEFFE YAES+S +DRMSE+ETSQMIQ+MI DSSK
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.2 Plant protein 1589 of unknown function1.4e-1553.73Show/hide
Query:  SYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMS
        SYI MVQH+IE+C++ RMT++EC+ AL  HA+I P++T TVW  L++ENK+FFETY    S +  +S
Subjt:  SYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMS

AT1G10657.3 Plant protein 1589 of unknown function1.1e-1551.35Show/hide
Query:  SYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQM
        SYI MVQH+IE+C++ RMT++EC+ AL  HA+I P++T TVW  L++ENK+FFETY    S +  +S+    QM
Subjt:  SYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQM

AT3G28990.1 Plant protein 1589 of unknown function1.5e-2562.79Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMI
        M  SS A YIH+VQH+IE CL F M+KEECM+AL ++ANI+P+ITSTVW EL KENK+FFETY +    K+ MSE+ET+Q+IQ +I
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMI

AT3G55240.1 Plant protein 1589 of unknown function1.3e-3476.92Show/hide
Query:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSK
        MADSSSASYIHMVQH+IEKCLIF M+KEEC++AL KHANI+PVITSTVW ELEKENKEFF+ Y E QS +++MSE+ET+QMIQ++I DSSK
Subjt:  MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSK

AT5G02580.1 Plant protein 1589 of unknown function2.4e-2360.71Show/hide
Query:  DSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMI
        +SS ASYIH+V HLIE+C++F M KEECMDALFKHANI P+ITSTVW EL KENKEFFE Y   +  ++  +E ET++ I+ ++
Subjt:  DSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATTCTTCTTCTGCTTCATACATACATATGGTGCAACACTTGATCGAGAAGTGTTTGATCTTTCGCATGACCAAAGAAGAATGCATGGATGCCCTCTTCAAACA
TGCAAATATTTCACCCGTCATCACGTCAACAGTGTGGACCGAGTTAGAGAAGGAAAACAAGGAATTCTTCGAGACGTATGCTGAATCTCAAAGCAATAAGGATAGAATGT
CCGAGGATGAGACGAGCCAAATGATCCAAAGGATGATCTTGGATTCCTCCAAAGGGGACCCTAAAACCTAA
mRNA sequenceShow/hide mRNA sequence
TAACCCTCAAGCTTGAAAATTCCAAGTCTAGTAAGGGGTTTGAGTGAGTTCATCATCTTACACTTCCCTCATTGGGAAAGATCAAATGGCATCCATGTCAGCTAGTAAAG
GTCAGTGCGGGCGATGTGGCAGGGATAACAACCAATTGGAGCGTGCCACGAAACATCGAGTAGTCATTCTTGTTCATTGGAAGGACTTGTAAACAGTGATGAGAGTAGCC
AAAGGACTGGTTTTGGCTGCCCTGTTGGAGTATGACACCTAGTTACTAGAGGCTACTCCCTTTGTCTGCTTGGAGGATTCCTCCTTAGGGTTTGGACCCCACACACGTGG
GTTCAAGACAAAGAAACTCTCCTTCACGAATCTCCTCTAATCCCTTCCCAACCAATGATCCTTAATCCCTCACGTGGGACTCCTGGCCCCACCTCCCTCTTCCCTGCCCT
TATTTAAGGACCTCACCCTTCAAAACCAGATCACTTACAAGCATCAACTCATGGCAGATTCTTCTTCTGCTTCATACATACATATGGTGCAACACTTGATCGAGAAGTGT
TTGATCTTTCGCATGACCAAAGAAGAATGCATGGATGCCCTCTTCAAACATGCAAATATTTCACCCGTCATCACGTCAACAGTGTGGACCGAGTTAGAGAAGGAAAACAA
GGAATTCTTCGAGACGTATGCTGAATCTCAAAGCAATAAGGATAGAATGTCCGAGGATGAGACGAGCCAAATGATCCAAAGGATGATCTTGGATTCCTCCAAAGGGGACC
CTAAAACCTAAGCTTAACAATCAAACAAAAACCACATAGAGAATATGTTTGAGGTCCCCATTCAATAGTATCATACGGAAATGAGCACGGAGGATTTCATTTGGCCCCTT
TGTTGGTGTAAATTGTTGTGTTTTTTTTTTTTTCCTTAACCAATCATCTTTTGCCATGTCAGCATATGTTTACTTGAAGGTATTACGTGGAACATAGCCATTGGATGATG
GATGTTGCTTATCTCCACGTTCTATACATAGTTCTTTCTTGTCTTCTTATTCTTGTAGTCAAAGCAATAAAGAAAGCTCATATTAATGTGGGGGACTACATGGAAGTTGG
CCTTTTCTTGTTCTAAGTCATGACCTTTTCCTATGCAAAAGGCGATGTTTATGGCTTTTTTTTCGTCACGGGTTCATAAACTATACACCCATTTACGTATCTCATTTGAA
TTCAAAAGGCGATCTTTATGGATTTCTTTTCGTCACGGGTTCATAATCTATAA
Protein sequenceShow/hide protein sequence
MADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTVWTELEKENKEFFETYAESQSNKDRMSEDETSQMIQRMILDSSKGDPKT