; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G027630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G027630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCASP-like protein
Genome locationCmo_Chr04:19978028..19978722
RNA-Seq ExpressionCmoCh04G027630
SyntenyCmoCh04G027630
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602372.1 CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-7396.93Show/hide
Query:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
        MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKG +NETTFKFKDVYSYRYLISTT+IGAVLSLLQIALNIYNVVTKSHRTLLF+MFSDKLLSYL
Subjt:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGN SAAVLLLAFICAAVVSILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

KAG7033050.1 CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-7198.1Show/hide
Query:  GSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGA
        GSRIASLILRILTFILIFISLIINATNSKTFNKG +NETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGA
Subjt:  GSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGA

Query:  SAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        SAGLGAGIDLRVGLKELVGNLLNSFFDKGN SAAVLLLAFICAAVVSILSSLALIRKP
Subjt:  SAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

XP_022954145.1 CASP-like protein 4D1 [Cucurbita moschata]6.6e-76100Show/hide
Query:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
        MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
Subjt:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

XP_022990642.1 CASP-like protein 4D1 [Cucurbita maxima]1.8e-7396.93Show/hide
Query:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
        MEGSKGSRIASLILRILTFILIFISL+INATNSKT NKGAENET FKFKDVYSYRYLISTT+IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
Subjt:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        LLSGASAGLGAGIDLRVGLKELVGNLLNSF DKGNASAAVLLLAFICAAVVSILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

XP_023525049.1 CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]4.7e-7497.55Show/hide
Query:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
        MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGA+NET FKFKDVYSYRYLIST +IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
Subjt:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

TrEMBL top hitse value%identityAlignment
A0A6J1C1A4 CASP-like protein6.2e-5677.91Show/hide
Query:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
        M  SKGSRIASLILRILTF+LIFISL+I ATNSKT  KG E E   +FKDVYSYRYL +  VIGA LSLLQIAL +Y+VVTKS  T  FDMFSDKLL+YL
Subjt:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        LLSGASAGLGAGIDLR   K+LVGN+ NSFFDKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

A0A6J1GRM4 CASP-like protein3.2e-76100Show/hide
Query:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
        MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
Subjt:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

A0A6J1HET3 CASP-like protein3.8e-5374.23Show/hide
Query:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
        M  SKGSRIASLILRILTFILIFISLIINATNSKT NKG ENE   +FK+VYSYRYLI+  VIG VLSL+QI L+IY++VTKS  T LF +FSD LLSYL
Subjt:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        LLS +SA LGAGID+R  LKEL G L +SFFD+G+ +AAVL +AF+CAAVVSILS+LALIRKP
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

A0A6J1JJD2 CASP-like protein8.7e-7496.93Show/hide
Query:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
        MEGSKGSRIASLILRILTFILIFISL+INATNSKT NKGAENET FKFKDVYSYRYLISTT+IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
Subjt:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        LLSGASAGLGAGIDLRVGLKELVGNLLNSF DKGNASAAVLLLAFICAAVVSILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

A0A6J1JSF8 CASP-like protein7.1e-5273.62Show/hide
Query:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL
        M  SKGSRIA+LILRILT ILIFISLIINA+NSKT NKG ENE   +FK+VYSYRYLI+  VIG VLSL+QI L+IY++VTKS  T LF +FSD LLSYL
Subjt:  MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        LLS +SA LGAGID R  LKEL G L +SFFD+G+ +AAVLL+AFICAAVVSILS+LALIRKP
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

SwissProt top hitse value%identityAlignment
B9NBE5 CASP-like protein 4D13.3e-2240.74Show/hide
Query:  SRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNV------VTKSHRTLLFDMFSDKLLSYL
        SR+ +L LR+LTF  + +SL+I  TN+ T   G + E   + KD YSYRY+++    G   ++LQIAL + ++       T     L+FD + DK++SY+
Subjt:  SRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNV------VTKSHRTLLFDMFSDKLLSYL

Query:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK
        L +GA+A  GA  +L+  L  L G   + FF+KG ASA++LLL F+C A++S+ SS AL +K
Subjt:  LLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK

B9SXY8 CASP-like protein 4D13.0e-2343.48Show/hide
Query:  SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHR-----TLLFDMFSDKLLS
        S  SR+A+LILRILTFI +  SL+I  TN+ T       E    FKDVY+YRY+++T VIG   ++LQIA  +Y V T +        L FD F DK++S
Subjt:  SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHR-----TLLFDMFSDKLLS

Query:  YLLLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLAL
        Y+L++GA+AG  +  D++           ++F +KG ASA++LL+ F+C AV+S+ SS AL
Subjt:  YLLLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLAL

C6T1Z6 CASP-like protein 4D14.2e-2545.45Show/hide
Query:  SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTL------LFDMFSDKLL
        S GSR   L+LR+LTF+ + I+LI+ A   +T +   E     KF D+Y+YRY+IST +IG   +LLQ+AL+I+ VV+  +R L      LFD F DK++
Subjt:  SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTL------LFDMFSDKLL

Query:  SYLLLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK
        SYLL+SG++AG G  ++L  G+        NSF DK NASA++LL+AF+  AV S  +S AL +K
Subjt:  SYLLLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK

D7LD59 CASP-like protein 4D29.1e-2039.13Show/hide
Query:  RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGA
        +++ L+LR+LT + + I+LII +TNS T      +   F FKDVY+YRY++S  VIG + +++Q+   I    T  K+      D + DKL+SYL+ +G+
Subjt:  RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGA

Query:  SAGLGAGIDLRVGLKELVG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK
        +AG G   DL+     LV     + ++ FF +G ASA++LL +FIC AV+S+ SSLA+ ++
Subjt:  SAGLGAGIDLRVGLKELVG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK

Q56X75 CASP-like protein 4D29.1e-2040.37Show/hide
Query:  RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGA
        ++  L+LR+LT + + I+LII +TNS T      +   F FKDVY+YRY++S  VIG V +++Q+   I    T  K+      D + DKL+SYL+ +G+
Subjt:  RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGA

Query:  SAGLGAGIDLRVGLKELVG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK
        +AG G   DL+     LV     + ++ FF KG ASA++LL AFIC AV+S+ SS A+ ++
Subjt:  SAGLGAGIDLRVGLKELVG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK

Arabidopsis top hitse value%identityAlignment
AT2G39518.1 Uncharacterised protein family (UPF0497)6.4e-2140.37Show/hide
Query:  RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGA
        ++  L+LR+LT + + I+LII +TNS T      +   F FKDVY+YRY++S  VIG V +++Q+   I    T  K+      D + DKL+SYL+ +G+
Subjt:  RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGA

Query:  SAGLGAGIDLRVGLKELVG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK
        +AG G   DL+     LV     + ++ FF KG ASA++LL AFIC AV+S+ SS A+ ++
Subjt:  SAGLGAGIDLRVGLKELVG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK

AT2G39530.1 Uncharacterised protein family (UPF0497)3.2e-2039.51Show/hide
Query:  RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVT-KSH-RTLLFDMFSDKLLSYLLLSGA
        R   L+LR+LT   + I++++ +TN+ T  + +       F DVY+YRY++S  VIG V +++Q+ L I    T K+H  T  FD + DK++SYLL +G+
Subjt:  RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVT-KSH-RTLLFDMFSDKLLSYLLLSGA

Query:  SAGLGAGIDLRVGLKELV----GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
        +AG G   DL+     L+     + ++ FF KG ASA++LL AF+  AV+S+ SSLAL ++P
Subjt:  SAGLGAGIDLRVGLKELV----GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTGATCCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAA
CAAAGGCGCTGAAAATGAAACAACATTTAAGTTTAAAGATGTTTATTCTTATCGATATTTGATATCAACTACGGTTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTC
TCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTACTCTTCGATATGTTCAGCGACAAACTGTTGTCGTATCTTCTACTGTCGGGAGCCTCGGCGGGGTTAGGT
GCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTG
CGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
AGGGTGGAAGGAGGAGATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTGATCCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCA
ATTCCAAAACTTTCAACAAAGGCGCTGAAAATGAAACAACATTTAAGTTTAAAGATGTTTATTCTTATCGATATTTGATATCAACTACGGTTATTGGAGCTGTTTTGAGT
CTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTACTCTTCGATATGTTCAGCGACAAACTGTTGTCGTATCTTCTACTGTCGGGAGC
CTCGGCGGGGTTAGGTGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTC
TCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGAAAATATTGTGTTGGTCTTCCATATTTGCTTTGTATTGAT
Protein sequenceShow/hide protein sequence
MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLG
AGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP