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CmoCh04G027650 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G027650
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionActin-11
Genome locationCmo_Chr04:19979684..19981455
RNA-Seq ExpressionCmoCh04G027650
SyntenyCmoCh04G027650
Gene Ontology termsGO:0034551 - mitochondrial respiratory chain complex III assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR027858 - Protein BRAWNIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037665.1 putative transmembrane protein [Cucumis melo var. makuwa]1.2e-1186.05Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        M QKFGG L PTGTPSVGWSFVVV+SSLLAGAS+VH+IYKPNL
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL

KAG6602373.1 hypothetical protein SDJN03_07606, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1493.48Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNLINV
        MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL ++
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNLINV

KAG7016236.1 hypothetical protein SDJN02_21342, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-1288.37Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        MA+KFGG L PTGTPSVGWSFVVV+SSLLAGAS+VHNIYKPNL
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL

KGN51309.1 hypothetical protein Csa_009362 [Cucumis sativus]6.8e-1288.37Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        M QKFGG L PTGTPSVGWSFVVVISSLLAGAS+VHNI+KPNL
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL

XP_023514673.1 uncharacterized protein LOC111778900 [Cucurbita pepo subsp. pepo]1.9e-1493.48Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNLINV
        MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL ++
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNLINV

TrEMBL top hitse value%identityAlignment
A0A0A0KQX5 Uncharacterized protein3.3e-1288.37Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        M QKFGG L PTGTPSVGWSFVVVISSLLAGAS+VHNI+KPNL
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL

A0A2P6R4K2 Uncharacterized protein5.8e-0976.74Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        M QKFGG  LPTGTPS+ WS VVV+ SLLAGASVVHN+YKP+L
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL

A0A4U5QZK5 Uncharacterized protein5.8e-0976.74Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        M++KFG    PTGTPS+GWSFVV I SLLAGASVVH+IYKPNL
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL

A0A5A7T878 Putative transmembrane protein5.6e-1286.05Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        M QKFGG L PTGTPSVGWSFVVV+SSLLAGAS+VH+IYKPNL
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL

A0A6A4PT41 Uncharacterized protein2.0e-0979.07Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        M +KFGG   PTGTPS+GWS VVV+ SLLAGASVVHNIYKPNL
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26055.1 unknown protein2.1e-1174.42Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        M  KFGG+  PTGTPS+ WS VVV++SLLAGASVVHNIYKP+L
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL

AT5G57080.1 unknown protein1.3e-0865.12Show/hide
Query:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL
        M + + G+ LPTGTPS+  S +VV++SLLAGASVVHNIYKP+L
Subjt:  MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAGAAATTCGGTGGTCGGTTGCTCCCCACTGGAACCCCCTCGGTGGGTTGGTCCTTCGTCGTCGTCATCTCTTCGCTTCTCGCCGGCGCCTCCGTCGTCCACAA
CATCTACAAACCGAATCTTATAAATGTTTTTCTCATCGTTCAGCTCAAACACTTTTTCACACGCTTTGATGTTGAAGTTCTCTATTGTTGGGAAAGGAAAAAAAAGAATC
TTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAGAAATTCGGTGGTCGGTTGCTCCCCACTGGAACCCCCTCGGTGGGTTGGTCCTTCGTCGTCGTCATCTCTTCGCTTCTCGCCGGCGCCTCCGTCGTCCACAA
CATCTACAAACCGAATCTTATAAATGTTTTTCTCATCGTTCAGCTCAAACACTTTTTCACACGCTTTGATGTTGAAGTTCTCTATTGTTGGGAAAGGAAAAAAAAGAATC
TTTGA
Protein sequenceShow/hide protein sequence
MAQKFGGRLLPTGTPSVGWSFVVVISSLLAGASVVHNIYKPNLINVFLIVQLKHFFTRFDVEVLYCWERKKKNL