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CmoCh04G027990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G027990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:20117223..20117645
RNA-Seq ExpressionCmoCh04G027990
SyntenyCmoCh04G027990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011655383.1 uncharacterized protein LOC105435522 [Cucumis sativus]1.7e-4070.2Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRF
        M DL+ TA  GKFRYRRLRYSEEFEEAFGRSR G     R+   R + WFR+R        SIGRRLKKLR+PSLRKLLRRK RLV AMRGSIAKVVKRF
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRF

Query:  REGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHSALQ-------NFAPTYSL
        R+GEAYLGDLFAGNYLFLQVNPSS+KC KNHH   Q       NF  TYSL
Subjt:  REGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHSALQ-------NFAPTYSL

XP_022922294.1 uncharacterized protein LOC111430312 [Cucurbita moschata]8.7e-69100Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY
        MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY

Query:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL
        LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL
Subjt:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL

XP_022990096.1 uncharacterized protein LOC111487096 [Cucurbita maxima]1.7e-6495.71Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY
        MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGE  RRRRFVGRSKRWF+IRRASIGRRLKKLRVPSLRKLLRRKSRLVTAM+GSI+KVVKRFREGEAY
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY

Query:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL
        LGDLFAGNYLFLQVNPSSIKCHKNHHSAL NFAPTYSLNL
Subjt:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL

XP_023551709.1 uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo]1.7e-6497.14Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY
        MPDLDTTA PGKFRYRRLRYSEEFEEAFGRSR GE  RRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY

Query:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL
        LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL
Subjt:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL

XP_038889218.1 uncharacterized protein LOC120079105 [Benincasa hispida]8.8e-4577.14Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRA-SIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEA
        M DL+ TAP  KFRYRRL YSEEFEEAFGR R GE     R + RSKRWFRIR+A SIGRRLKKLR+PSLRKLLRRKS+LV AMRGSI+K++KRFR+GEA
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRA-SIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEA

Query:  YLGDLFAGNYLFLQVNPSSIKCHKNHHS-ALQNFAPTYSL
        YLGDLFAGNYLFLQVNPSS+KC KNHH   LQNF  TYSL
Subjt:  YLGDLFAGNYLFLQVNPSSIKCHKNHHS-ALQNFAPTYSL

TrEMBL top hitse value%identityAlignment
A0A0A0KSD1 Uncharacterized protein8.3e-4170.2Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRF
        M DL+ TA  GKFRYRRLRYSEEFEEAFGRSR G     R+   R + WFR+R        SIGRRLKKLR+PSLRKLLRRK RLV AMRGSIAKVVKRF
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRF

Query:  REGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHSALQ-------NFAPTYSL
        R+GEAYLGDLFAGNYLFLQVNPSS+KC KNHH   Q       NF  TYSL
Subjt:  REGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHSALQ-------NFAPTYSL

A0A1S4E272 uncharacterized protein LOC1079916311.8e-4070.47Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKR-WFRIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKR
        M DL+ TA  GKFRYRRLRYSEEFEEAFGRSR G    R+R+  R++R WFR+R        SIGRRLKKLR+PSLRKL+RRK RLV AMRGSIAKV+KR
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKR-WFRIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKR

Query:  FREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHSA----LQNFAPTYSL
        FR+GEAYLGDLFAGNYLFLQVNPSS+KC KNHH      ++NF  TYSL
Subjt:  FREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHSA----LQNFAPTYSL

A0A6J1E2Z5 uncharacterized protein LOC1114303124.2e-69100Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY
        MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY

Query:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL
        LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL
Subjt:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL

A0A6J1FMJ7 uncharacterized protein LOC1114453178.6e-3871.22Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY
        M DL+  A   KFRYRRLR+S+E E AF RSR GE   +RRF G     FR+RRASIGRRLKKLR+PSLRKL  RKSRLV AM GSI+KV+KRFR+GEAY
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY

Query:  LGDLFAGNYLFLQVNPSSIKCHKNHHS-ALQNFAPTYSL
        LGDLFAGNYLFLQ+NPSSIKC  NHH   LQNF PT+SL
Subjt:  LGDLFAGNYLFLQVNPSSIKCHKNHHS-ALQNFAPTYSL

A0A6J1JM01 uncharacterized protein LOC1114870968.2e-6595.71Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY
        MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGE  RRRRFVGRSKRWF+IRRASIGRRLKKLRVPSLRKLLRRKSRLVTAM+GSI+KVVKRFREGEAY
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAY

Query:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL
        LGDLFAGNYLFLQVNPSSIKCHKNHHSAL NFAPTYSLNL
Subjt:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14410.1 unknown protein2.0e-0735.04Show/hide
Query:  LDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLK-KLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAYLG
        +D++       Y+RL      ++ FG +     RRR  F   S R+ R+      RR++ ++++  LR  +R+K+  V   +  I K++KR +E +++ G
Subjt:  LDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLK-KLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAYLG

Query:  DLFAGNYLFLQVNPSSI
        DLFAGNYLF+QVNPSS+
Subjt:  DLFAGNYLFLQVNPSSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGACCTCGACACAACCGCGCCGCCAGGCAAGTTCCGGTACCGGAGGCTGAGATACAGCGAGGAATTTGAGGAGGCGTTTGGAAGATCGAGGCGAGGAGAAGCGAG
GAGGAGGAGGAGATTCGTCGGAAGATCGAAGCGGTGGTTCAGAATCAGAAGGGCTTCGATTGGGAGGAGGTTGAAGAAGCTCAGAGTTCCAAGCCTGAGAAAGCTGTTGA
GAAGGAAATCGCGGCTGGTGACGGCCATGAGAGGCTCGATTGCGAAGGTTGTGAAGAGGTTTAGGGAAGGGGAAGCGTATTTGGGGGATCTTTTTGCTGGAAATTATTTG
TTTCTTCAGGTGAATCCCAGCTCCATCAAATGCCATAAAAATCACCATTCTGCCCTTCAAAATTTCGCCCCAACTTATTCCCTCAACCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGACCTCGACACAACCGCGCCGCCAGGCAAGTTCCGGTACCGGAGGCTGAGATACAGCGAGGAATTTGAGGAGGCGTTTGGAAGATCGAGGCGAGGAGAAGCGAG
GAGGAGGAGGAGATTCGTCGGAAGATCGAAGCGGTGGTTCAGAATCAGAAGGGCTTCGATTGGGAGGAGGTTGAAGAAGCTCAGAGTTCCAAGCCTGAGAAAGCTGTTGA
GAAGGAAATCGCGGCTGGTGACGGCCATGAGAGGCTCGATTGCGAAGGTTGTGAAGAGGTTTAGGGAAGGGGAAGCGTATTTGGGGGATCTTTTTGCTGGAAATTATTTG
TTTCTTCAGGTGAATCCCAGCTCCATCAAATGCCATAAAAATCACCATTCTGCCCTTCAAAATTTCGCCCCAACTTATTCCCTCAACCTCTAA
Protein sequenceShow/hide protein sequence
MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAYLGDLFAGNYL
FLQVNPSSIKCHKNHHSALQNFAPTYSLNL