; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G028140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G028140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionABC transporter B family member 26, chloroplastic-like
Genome locationCmo_Chr04:20182215..20185689
RNA-Seq ExpressionCmoCh04G028140
SyntenyCmoCh04G028140
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602416.1 hypothetical protein SDJN03_07649, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2792.31Show/hide
Query:  MELIDILHPAEEHLKYFCFFRLHNSQCGGDCDSRRPDIHYLSSNSRGSMNQVKRDLMFCSQEVSE
        MELIDILHPAEEHLKYFCFFRLHNSQCGGDCDSRRPDIHYLS NSRGSMNQ KRDLMFCSQE ++
Subjt:  MELIDILHPAEEHLKYFCFFRLHNSQCGGDCDSRRPDIHYLSSNSRGSMNQVKRDLMFCSQEVSE

XP_022133689.1 ABC transporter B family member 26, chloroplastic-like [Momordica charantia]1.7e-1567.16Show/hide
Query:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPGSSWWNLDERMKVEVEAAKPLILYLALHQVIK
        SSL+LRYMV END NG++ FKSFG+ + VSRSLFP  SWWNLDE  KVE+ AAKPL +YLAL ++ K
Subjt:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPGSSWWNLDERMKVEVEAAKPLILYLALHQVIK

XP_038891218.1 ABC transporter B family member 26, chloroplastic-like isoform X1 [Benincasa hispida]1.9e-1465.22Show/hide
Query:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK
        SSLML+YMV END NG+EKFKSFG+ I +SRSLF G  SSWWNLDE  +VE+ AAKP+ +YL L ++ K
Subjt:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK

XP_038891220.1 ABC transporter B family member 26, chloroplastic-like isoform X2 [Benincasa hispida]1.9e-1465.22Show/hide
Query:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK
        SSLML+YMV END NG+EKFKSFG+ I +SRSLF G  SSWWNLDE  +VE+ AAKP+ +YL L ++ K
Subjt:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK

XP_038891221.1 ABC transporter B family member 26, chloroplastic-like isoform X3 [Benincasa hispida]1.9e-1465.22Show/hide
Query:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK
        SSLML+YMV END NG+EKFKSFG+ I +SRSLF G  SSWWNLDE  +VE+ AAKP+ +YL L ++ K
Subjt:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK

TrEMBL top hitse value%identityAlignment
A0A0A0KR30 Uncharacterized protein2.1e-1157.97Show/hide
Query:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK
        SSLM +YM+ E+D NG+E F+SFG+ IHVS SLFPG   SWWNLDE  +V++ AAK + +YLAL ++ K
Subjt:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK

A0A1S3C888 ABC transporter B family member 26, chloroplastic-like9.4e-1259.42Show/hide
Query:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK
        SSLML+Y   END NG+E FKSFG+ +HV  SLFPG  SSWWNL E  +V + AAKP+ +YLAL ++ K
Subjt:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK

A0A5A7T462 ABC transporter B family member 269.4e-1259.42Show/hide
Query:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK
        SSLML+Y   END NG+E FKSFG+ +HV  SLFPG  SSWWNL E  +V + AAKP+ +YLAL ++ K
Subjt:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK

A0A5D3BV94 ABC transporter B family member 269.4e-1259.42Show/hide
Query:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK
        SSLML+Y   END NG+E FKSFG+ +HV  SLFPG  SSWWNL E  +V + AAKP+ +YLAL ++ K
Subjt:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPG--SSWWNLDERMKVEVEAAKPLILYLALHQVIK

A0A6J1BWQ8 ABC transporter B family member 26, chloroplastic-like8.2e-1667.16Show/hide
Query:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPGSSWWNLDERMKVEVEAAKPLILYLALHQVIK
        SSL+LRYMV END NG++ FKSFG+ + VSRSLFP  SWWNLDE  KVE+ AAKPL +YLAL ++ K
Subjt:  SSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPGSSWWNLDERMKVEVEAAKPLILYLALHQVIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTAATGCTATCGCCATCGTGTGCGGGAAATCTTCACTGATGCTCCGATATATGGTGCTTGAAAATGACCGAAATGGAAATGAGAAATTCAAATCATTTGGAAA
TTCGATTCATGTTTCGCGTTCGCTGTTTCCTGGTAGTAGTTGGTGGAACTTAGATGAGCGTATGAAAGTAGAAGTTGAAGCTGCGAAGCCGCTTATACTTTATTTAGCTC
TTCATCAGGTTATAAAGCCTCAATCTTTGATCACTCTGCTGAAAATTGACATGGAGTTAATTGATATACTTCATCCTGCTGAAGAACACCTAAAATATTTCTGCTTTTTC
AGATTGCATAACTCGCAATGTGGGGGAGATTGTGACAGTAGAAGGCCAGACATACACTATCTCAGCAGTAACTCTAGGGGAAGTATGAACCAAGTGAAGAGAGACTTGAT
GTTTTGTTCACAGGAAGTTTCGGAAGGACCAGCCAAACCAACTCCTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATATGAACCGGATGATTCGGCTTGATCGGTTCGGGTCTCGATTGATTCTGCACCACGTACATCAAAGATATTTCTTATGCAAACATGGAAATTGCCCGCCAGAATCT
TCGCATTTTCCTTTCTCCGTATTTTACACCGGCAAAATTCTCTCCCAGTTCAAGATTTCGATCGTCTGGTTTTGAGCCGACGATGAAGCCTCAATTCCCGATTATCATTT
CTAGTAGTTTTGGAAGTAATGAATTCTAATGCTATCGCCATCGTGTGCGGGAAATCTTCACTGATGCTCCGATATATGGTGCTTGAAAATGACCGAAATGGAAATGAGAA
ATTCAAATCATTTGGAAATTCGATTCATGTTTCGCGTTCGCTGTTTCCTGGTAGTAGTTGGTGGAACTTAGATGAGCGTATGAAAGTAGAAGTTGAAGCTGCGAAGCCGC
TTATACTTTATTTAGCTCTTCATCAGGTTATAAAGCCTCAATCTTTGATCACTCTGCTGAAAATTGACATGGAGTTAATTGATATACTTCATCCTGCTGAAGAACACCTA
AAATATTTCTGCTTTTTCAGATTGCATAACTCGCAATGTGGGGGAGATTGTGACAGTAGAAGGCCAGACATACACTATCTCAGCAGTAACTCTAGGGGAAGTATGAACCA
AGTGAAGAGAGACTTGATGTTTTGTTCACAGGAAGTTTCGGAAGGACCAGCCAAACCAACTCCTTACTAG
Protein sequenceShow/hide protein sequence
MNSNAIAIVCGKSSLMLRYMVLENDRNGNEKFKSFGNSIHVSRSLFPGSSWWNLDERMKVEVEAAKPLILYLALHQVIKPQSLITLLKIDMELIDILHPAEEHLKYFCFF
RLHNSQCGGDCDSRRPDIHYLSSNSRGSMNQVKRDLMFCSQEVSEGPAKPTPY