; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G028170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G028170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLOB domain-containing protein
Genome locationCmo_Chr04:20199087..20199554
RNA-Seq ExpressionCmoCh04G028170
SyntenyCmoCh04G028170
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602419.1 LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia]1.5e-8298.06Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
        QKELD TNADLVRYASGGARPYGRRAAAQSGVCFISPLN+NDRHDPYCRDKEEQN
Subjt:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN

KAG7033097.1 LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-8399.35Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
        QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
Subjt:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN

XP_022922097.1 LOB domain-containing protein 25-like [Cucurbita moschata]8.1e-84100Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
        QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
Subjt:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN

XP_022991035.1 LOB domain-containing protein 25-like [Cucurbita maxima]4.5e-8297.42Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
        QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLN+NDRHDPYC DKEE+N
Subjt:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN

XP_023551247.1 LOB domain-containing protein 25-like [Cucurbita pepo subsp. pepo]1.2e-8298.06Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
        QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLN+NDRHDPYCRDKEE+N
Subjt:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN

TrEMBL top hitse value%identityAlignment
A0A0A0KSE8 LOB domain-containing protein1.4e-6579.75Show/hide
Query:  SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQK
        +SSS++NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PHQREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQK
Subjt:  SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQK

Query:  ELDATNADLVRYASGGARP---YGRRAAA-------QSGVCFISPLNTNDRHDPYCRDKEEQN
        ELDATNADLVRYASG ARP   YGRRA          SG+ F+SPL+++     YC DKEE N
Subjt:  ELDATNADLVRYASGGARP---YGRRAAA-------QSGVCFISPLNTNDRHDPYCRDKEEQN

A0A1S3C8P8 LOB domain-containing protein 251.3e-6679.88Show/hide
Query:  SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQK
        +SSS++NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PHQREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQK
Subjt:  SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQK

Query:  ELDATNADLVRYASGGARP---YGRRAAA--------QSGVCFISPLNTNDRHDPYCRDKEEQN
        ELDATNADLVRYASG ARP   YGRRA           SG+ F+SPL++N   DPYC + EE N
Subjt:  ELDATNADLVRYASGGARP---YGRRAAA--------QSGVCFISPLNTNDRHDPYCRDKEEQN

A0A5A7T800 LOB domain-containing protein 253.3e-6780.49Show/hide
Query:  SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQK
        +SSS++NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PHQREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQK
Subjt:  SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQK

Query:  ELDATNADLVRYASGGARP---YGRRAAA--------QSGVCFISPLNTNDRHDPYCRDKEEQN
        ELDATNADLVRYASG ARP   YGRRA           SG+ F+SPL++N   DPYC +KEE N
Subjt:  ELDATNADLVRYASGGARP---YGRRAAA--------QSGVCFISPLNTNDRHDPYCRDKEEQN

A0A6J1E293 LOB domain-containing protein 25-like3.9e-84100Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
        QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
Subjt:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN

A0A6J1JRR4 LOB domain-containing protein 25-like2.2e-8297.42Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
        QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLN+NDRHDPYC DKEE+N
Subjt:  QKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN

SwissProt top hitse value%identityAlignment
A2WXT0 LOB domain-containing protein 66.3e-3964.29Show/hide
Query:  SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDAT
        + SPCAACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLL+E+HP+QREDAVNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L   
Subjt:  SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDAT

Query:  NADLVRYASGGA
          +L +Y    A
Subjt:  NADLVRYASGGA

O04479 Protein ASYMMETRIC LEAVES 22.8e-4268.64Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSS  +NSPCAACKFLRRKC  +C+FAPYFPP++P KFANVHK+FGASNV+KLL+E+HP QREDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +L
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRYASGG
        Q +L    ++L +Y S G
Subjt:  QKELDATNADLVRYASGG

Q32SG3 LOB domain-containing protein 67.5e-4056.64Show/hide
Query:  SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDAT
        + SPCAACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLL+E+HP QREDAVNSLAYEA+ R++DPVYGCVG ISILQ  + +LQ++L   
Subjt:  SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDAT

Query:  NADLVRY-----ASGGARPYGRRAAAQSGVCFISPLNTNDRHD
          +L +Y     AS    P G +A A+    FI     N  H+
Subjt:  NADLVRY-----ASGGARPYGRRAAAQSGVCFISPLNTNDRHD

Q8L8Q3 LOB domain-containing protein 254.5e-5385.59Show/hide
Query:  SSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKEL
        S+++NSPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+LHEV PHQREDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV+RLQ+EL
Subjt:  SSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKEL

Query:  DATNADLVRYA
        + TNADL+RYA
Subjt:  DATNADLVRYA

Q9FML4 Protein LATERAL ORGAN BOUNDARIES1.0e-4984.21Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRY
        QKELDA NADL  Y
Subjt:  QKELDATNADLVRY

Arabidopsis top hitse value%identityAlignment
AT3G27650.1 LOB domain-containing protein 253.2e-5485.59Show/hide
Query:  SSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKEL
        S+++NSPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+LHEV PHQREDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV+RLQ+EL
Subjt:  SSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKEL

Query:  DATNADLVRYA
        + TNADL+RYA
Subjt:  DATNADLVRYA

AT5G63090.1 Lateral organ boundaries (LOB) domain family protein7.4e-5184.21Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRY
        QKELDA NADL  Y
Subjt:  QKELDATNADLVRY

AT5G63090.2 Lateral organ boundaries (LOB) domain family protein7.4e-5184.21Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRY
        QKELDA NADL  Y
Subjt:  QKELDATNADLVRY

AT5G63090.3 Lateral organ boundaries (LOB) domain family protein7.4e-5184.21Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRY
        QKELDA NADL  Y
Subjt:  QKELDATNADLVRY

AT5G63090.4 Lateral organ boundaries (LOB) domain family protein7.4e-5184.21Show/hide
Query:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL
        MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RL
Subjt:  MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRL

Query:  QKELDATNADLVRY
        QKELDA NADL  Y
Subjt:  QKELDATNADLVRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCATCCAGCTTCTCAAATTCACCATGTGCAGCATGCAAGTTCCTCCGAAGAAAATGCTTAGCGGACTGCATATTTGCGCCCTACTTTCCACCCGAAGAGCC
CACCAAGTTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTCCTCCATGAGGTCCACCCCCATCAGCGCGAGGACGCCGTCAATTCTCTTGCCTACG
AGGCCGAGGCTCGTATGAAAGACCCCGTCTATGGCTGCGTCGGAGCCATCTCTATCCTTCAGCGACAAGTCATTCGCCTCCAGAAGGAGCTTGACGCTACGAATGCTGAT
TTGGTTCGATATGCCAGCGGGGGCGCTCGCCCGTATGGACGGAGGGCAGCAGCGCAGTCTGGTGTGTGTTTTATTTCCCCCTTGAATACTAATGATCGTCATGATCCATA
TTGCCGTGATAAAGAGGAACAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCATCCAGCTTCTCAAATTCACCATGTGCAGCATGCAAGTTCCTCCGAAGAAAATGCTTAGCGGACTGCATATTTGCGCCCTACTTTCCACCCGAAGAGCC
CACCAAGTTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTCCTCCATGAGGTCCACCCCCATCAGCGCGAGGACGCCGTCAATTCTCTTGCCTACG
AGGCCGAGGCTCGTATGAAAGACCCCGTCTATGGCTGCGTCGGAGCCATCTCTATCCTTCAGCGACAAGTCATTCGCCTCCAGAAGGAGCTTGACGCTACGAATGCTGAT
TTGGTTCGATATGCCAGCGGGGGCGCTCGCCCGTATGGACGGAGGGCAGCAGCGCAGTCTGGTGTGTGTTTTATTTCCCCCTTGAATACTAATGATCGTCATGATCCATA
TTGCCGTGATAAAGAGGAACAAAATTGA
Protein sequenceShow/hide protein sequence
MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNAD
LVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN