; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G028310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G028310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description50S ribosomal protein L12
Genome locationCmo_Chr04:20258715..20259290
RNA-Seq ExpressionCmoCh04G028310
SyntenyCmoCh04G028310
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000206 - Ribosomal protein L7/L12
IPR008932 - Ribosomal protein L7/L12, oligomerisation
IPR013823 - Ribosomal protein L7/L12, C-terminal
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR036235 - Ribosomal protein L7/L12, oligomerisation domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033112.1 50S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-8699.48Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLSTLTTLRSPPHLSYSHSSFSTQSS STTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

XP_022960313.1 50S ribosomal protein L12, chloroplastic-like [Cucurbita moschata]3.3e-87100Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

XP_022989905.1 50S ribosomal protein L12, chloroplastic [Cucurbita maxima]1.7e-8397.38Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLSTLT+LRSP HLSYSHSSFSTQSS STTLQFPFNPSSTATSHRAT LRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
         VVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

XP_023536532.1 50S ribosomal protein L12, chloroplastic-like [Cucurbita pepo subsp. pepo]1.4e-8598.95Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLSTLTTLRSP HLSYSHSSFSTQSS STTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

XP_038890576.1 50S ribosomal protein L12, chloroplastic-like [Benincasa hispida]5.2e-7288.02Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLS L TL SP HLSYSHSS ST S  STTLQFP + SS A SHRAT+LRPIAA+SAPEKIEKLG+DISNLTLEEAR+LVDFLQDKLGVSAA+FAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAP-GAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAP G A G+AAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAP-GAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

TrEMBL top hitse value%identityAlignment
A0A6J1BXR2 50S ribosomal protein L12, chloroplastic-like1.8e-7089.12Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTAT-SHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAP
        MASTLSTL TLRSP +LS+S  S ST SS S  +QFPF PSS A  SHRAT LRPIAAVSAPEKIEKLG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAP
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTAT-SHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAP

Query:  AAVVAAPGAA-AGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AAVVAAPGAA AGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKIAIV
Subjt:  AAVVAAPGAA-AGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

A0A6J1FMH9 50S ribosomal protein L12, chloroplastic-like2.0e-6684.9Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLSTL TLR+P  LS+SHSSFST SS  TTL F         SHR T LRPIAAVSAPEKIEKLG+DISNLTLEEARILVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAP-GAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAP G A GDAAAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALT+LALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKI IV
Subjt:  AVVAAP-GAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

A0A6J1H8H9 50S ribosomal protein L12, chloroplastic-like1.6e-87100Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

A0A6J1JNN0 50S ribosomal protein L12, chloroplastic8.3e-8497.38Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLSTLT+LRSP HLSYSHSSFSTQSS STTLQFPFNPSSTATSHRAT LRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
         VVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
Subjt:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

A0A6J1JTI3 50S ribosomal protein L12, chloroplastic1.9e-6785.42Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLSTL TLR+P  LS+SHSSFST SS  TTL FP        SHRAT LRPIAAVSAPEKIEKLG+DISNLTLEEARILVDFLQDKLGVSAAAFAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAP-GAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        AVVAAP G A GD AAEAVEEKTEFDVVIE+VPSNARIAVIK+VRALT+LALKEAKELIEGLPKKFKEG+SKEEAEDAKKQLEEAGAKI IV
Subjt:  AVVAAP-GAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

SwissProt top hitse value%identityAlignment
P02398 50S ribosomal protein L12, chloroplastic1.8e-5168.04Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSS---TATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAF
        MA+T +T+ TL  P     SH + ST       LQFPF  ++   + +S R T LRPIAAV APEKIE+LG  +S LTLEEAR+LVD+LQDKLGVSAA+F
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSS---TATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAF

Query:  APAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        APAA VAAPGA A   AA AVEEKTEFDV I++VPSNARI+VIKAVRALTSL LKEAKELIEGLPKK KEG+SK++AEDAKKQLE+AGAK++IV
Subjt:  APAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

P24929 50S ribosomal protein L12, chloroplastic2.1e-5269.39Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFN----PSSTATSH--RATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSA
        MASTLST+ TLRSP        S ST SST  ++ FP      P  T   H  RAT+LRP+AAV APEK+ +LG +ISNLTL +A+ LV++LQDKLGV+A
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFN----PSSTATSH--RATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSA

Query:  AAFAPAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        A+FAPAAV AAPGAAA   A   VEEKTEFDVVI++VPSNARIA IKAVRALTSLALKEAKELIEGLPKKFKEG+SK+EAEDAKKQLEEAGAK++I
Subjt:  AAFAPAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

P36210 50S ribosomal protein L12-1, chloroplastic1.7e-4965.62Show/hide
Query:  ASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPF---NPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFA
        ++TLS  TT+RS  + +   +S +   S +TT++FP      SS+  +HRAT+LRPIAAV APEKIEK+G++IS+LTLEEARILVD+LQDK GVS  + A
Subjt:  ASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPF---NPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFA

Query:  PAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        PAA  AA  A A   AA  VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK LEEAGAK++I
Subjt:  PAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

P36212 50S ribosomal protein L12-3, chloroplastic6.4e-4967.02Show/hide
Query:  ASTLSTLTTLRSPPHLSYSHSSFSTQS--STSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAP
        ++TLS  TT+RS   L    +S ST    S  T ++FPF  SS ++SHRA  LRPI+AV APEKIEK+G++IS+LTLEEARILVD+LQDK GVS  + AP
Subjt:  ASTLSTLTTLRSPPHLSYSHSSFSTQS--STSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAP

Query:  AAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        AA  AA  A A   AA  VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK LEEAGAK++I
Subjt:  AAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

P36688 50S ribosomal protein L12, chloroplastic4.7e-5269.47Show/hide
Query:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA
        MASTLST+ TLRSP   S + S+ ++      TL+FP   +    + RAT+LRP+AAV APEK+ +LG +ISNLTL +A+ LV++LQDKLGV+AA+FAPA
Subjt:  MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPA

Query:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        AVVAAPGAAA   A   VEEKTEFDVVI++VPSNARIA IKAVRALTSLALKEAKELIEGLPKKFKEG+SK+EAEDAKKQLEEAGAK++I
Subjt:  AVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

Arabidopsis top hitse value%identityAlignment
AT3G27830.1 ribosomal protein L12-A1.2e-5065.62Show/hide
Query:  ASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPF---NPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFA
        ++TLS  TT+RS  + +   +S +   S +TT++FP      SS+  +HRAT+LRPIAAV APEKIEK+G++IS+LTLEEARILVD+LQDK GVS  + A
Subjt:  ASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPF---NPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFA

Query:  PAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        PAA  AA  A A   AA  VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK LEEAGAK++I
Subjt:  PAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

AT3G27840.1 ribosomal protein L12-B2.3e-4156.48Show/hide
Query:  ASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFN---PSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFA
        A+TLS  TT+RS    S   +S     S   +++FPF+    SS+  SHRA YL PI+AV  P+KI+K+G++IS+LTLEE+RILVD++QDK GVS    A
Subjt:  ASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFN---PSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFA

Query:  PAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV
        PAA    P    G A A +VE +T FDVVI DVP   RIAVI A+RA+TSL+L E+KELIEG PKKFKEG++K+EAE+ K QLEEAGAK++IV
Subjt:  PAAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV

AT3G27850.1 ribosomal protein L12-C4.5e-5067.02Show/hide
Query:  ASTLSTLTTLRSPPHLSYSHSSFSTQS--STSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAP
        ++TLS  TT+RS   L    +S ST    S  T ++FPF  SS ++SHRA  LRPI+AV APEKIEK+G++IS+LTLEEARILVD+LQDK GVS  + AP
Subjt:  ASTLSTLTTLRSPPHLSYSHSSFSTQS--STSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAP

Query:  AAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        AA  AA  A A   AA  VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK LEEAGAK++I
Subjt:  AAVVAAPGAAAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

AT4G36420.1 Ribosomal protein L12 family protein8.1e-1540.44Show/hide
Query:  EKIEKLGADISNLTLEEARILVDFLQDKLGVS----AAAFAPAAVVAAPGA---AAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEA
        E + K+  ++SNLTL E   L + L+ KL +S     AA  P   +   GA   A G+   +  E KT FDV+++   + ++I VIK VR +T+L LKEA
Subjt:  EKIEKLGADISNLTLEEARILVDFLQDKLGVS----AAAFAPAAVVAAPGA---AAGDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEA

Query:  KELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        K+L+E  P   K+G+SKEEAE   ++L+  GAK+A+
Subjt:  KELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI

AT4G37660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein4.6e-1035.44Show/hide
Query:  PSSTATSHRATYLRPIAAVSAPE----KIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPAAVVAAPGAAAGDAAAEA---VEEKTEFDVVIEDVP
        P S+AT H       + AV++PE    K+E++  D+  L   E          K+G++    A A        + GDA+A       EKT FDV +E   
Subjt:  PSSTATSHRATYLRPIAAVSAPE----KIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPAAVVAAPGAAAGDAAAEA---VEEKTEFDVVIEDVP

Query:  SNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI
        + ++I VIK +RA T L LKEAK L+E  P   K G++KEEAE   ++L+  GA +A+
Subjt:  SNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTACACTCTCCACTCTCACCACCCTCCGTTCCCCACCGCACCTTTCTTATTCCCATTCCTCTTTTTCCACTCAGTCCTCCACTTCCACAACCCTCCAATTTCC
CTTTAACCCTTCCTCCACCGCCACCTCCCATCGCGCCACCTACCTCCGTCCAATTGCCGCCGTGTCAGCCCCTGAGAAAATCGAAAAGCTCGGCGCCGACATCTCCAACC
TCACTCTCGAAGAAGCCCGCATTCTGGTCGACTTTCTTCAAGATAAGCTTGGGGTCTCCGCTGCCGCATTCGCCCCCGCCGCCGTCGTCGCAGCACCCGGCGCCGCAGCC
GGGGACGCGGCCGCGGAGGCGGTGGAGGAGAAAACGGAATTCGATGTGGTCATTGAGGACGTCCCAAGCAATGCTAGAATTGCAGTGATTAAGGCAGTGAGGGCATTGAC
AAGCTTGGCTTTGAAGGAAGCCAAAGAACTCATCGAAGGTTTGCCCAAGAAGTTCAAGGAAGGGATTTCGAAAGAAGAGGCTGAGGATGCCAAGAAACAGCTTGAAGAAG
CTGGAGCTAAAATAGCCATTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTACACTCTCCACTCTCACCACCCTCCGTTCCCCACCGCACCTTTCTTATTCCCATTCCTCTTTTTCCACTCAGTCCTCCACTTCCACAACCCTCCAATTTCC
CTTTAACCCTTCCTCCACCGCCACCTCCCATCGCGCCACCTACCTCCGTCCAATTGCCGCCGTGTCAGCCCCTGAGAAAATCGAAAAGCTCGGCGCCGACATCTCCAACC
TCACTCTCGAAGAAGCCCGCATTCTGGTCGACTTTCTTCAAGATAAGCTTGGGGTCTCCGCTGCCGCATTCGCCCCCGCCGCCGTCGTCGCAGCACCCGGCGCCGCAGCC
GGGGACGCGGCCGCGGAGGCGGTGGAGGAGAAAACGGAATTCGATGTGGTCATTGAGGACGTCCCAAGCAATGCTAGAATTGCAGTGATTAAGGCAGTGAGGGCATTGAC
AAGCTTGGCTTTGAAGGAAGCCAAAGAACTCATCGAAGGTTTGCCCAAGAAGTTCAAGGAAGGGATTTCGAAAGAAGAGGCTGAGGATGCCAAGAAACAGCTTGAAGAAG
CTGGAGCTAAAATAGCCATTGTTTAA
Protein sequenceShow/hide protein sequence
MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTATSHRATYLRPIAAVSAPEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPAAVVAAPGAAA
GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAIV