; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G028580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G028580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFerredoxin-thioredoxin reductase catalytic chain, chloroplastic
Genome locationCmo_Chr04:20367113..20369997
RNA-Seq ExpressionCmoCh04G028580
SyntenyCmoCh04G028580
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
GO:0103012 - ferredoxin-thioredoxin reductase activity (molecular function)
InterPro domainsIPR004209 - Ferredoxin thioredoxin reductase catalytic beta subunit
IPR036644 - Ferredoxin thioredoxin reductase catalytic beta subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602457.1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.1e-78100Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

XP_008458720.1 PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis melo]7.8e-7393.06Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNIAVPLSGSS G SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ I++EDI+ATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

XP_022923802.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata]2.1e-78100Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

XP_022989856.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima]4.7e-7899.31Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQVIT+EDIKATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

XP_023511536.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita pepo subsp. pepo]3.4e-7697.92Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNI VPLSGSS  RSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ8 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.9e-7292.36Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNIAVPL GSS G SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ I++EDI+ATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

A0A1S3C819 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic3.8e-7393.06Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNIAVPLSGSS G SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ I++EDI+ATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

A0A5A7T273 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic3.8e-7393.06Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNIAVPLSGSS G SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ I++EDI+ATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

A0A6J1E756 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.0e-78100Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

A0A6J1JLC1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic2.3e-7899.31Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQVIT+EDIKATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

SwissProt top hitse value%identityAlignment
O49856 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.9e-6681.94Show/hide
Query:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
        M  QAS+F +AVP   +   R R+  VVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW
Subjt:  MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        NCPCVPMRERKECHCMLFLTP+NDFAGN+Q IT+++IK +TANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

P41347 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic7.7e-5576.12Show/hide
Query:  PLSGSSTGRSRHSHVVRAQG----EPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMR
        PLS ++ GR R    VRAQ       +DKSVE+MRKFSEQYAR+S T+FC DK VTAVVIKGLADH+DTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMR
Subjt:  PLSGSSTGRSRHSHVVRAQG----EPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMR

Query:  ERKECHCMLFLTPENDFAGNDQVITMEDIKATTA
        ERKECHCMLFLTP+NDFAG DQVI+ E+IK  T+
Subjt:  ERKECHCMLFLTPENDFAGNDQVITMEDIKATTA

P41348 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic9.7e-5871.22Show/hide
Query:  SSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCV
        +S   + P+S  +    R S V+RAQ +PSDKS+E+MRKFSEQ+ RKS TYFCVDK VTAVVIKGLADH+DTLGAPLCPCRHYDDK AE  QGFWNCPCV
Subjt:  SSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCV

Query:  PMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        PMRERKECHCMLFLTP+NDFAG +Q IT+++I+  T+NM
Subjt:  PMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

P41349 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.1e-5673.29Show/hide
Query:  LQASSFNIAVPLSGSSTGRSRHSH----VVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQG
        LQAS+       S S+T   R +H    V+ ++ EPSDKSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLA+HKD+LGAPLCPCR+YDDKAAE  QG
Subjt:  LQASSFNIAVPLSGSSTGRSRHSH----VVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQG

Query:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        FWNCPCVPMRERKECHCMLFLTPENDFAG DQ I +++I+  TANM
Subjt:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

Q9SJ89 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.9e-5874.66Show/hide
Query:  MILQA--SSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQG
        M LQA   SF       G +   S    V+RA+ EPS+KSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDKAAEV QG
Subjt:  MILQA--SSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQG

Query:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        FWNCPCVPMRERKECHCMLFLTP+NDFAG DQ IT ++IK TTANM
Subjt:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM

Arabidopsis top hitse value%identityAlignment
AT2G04700.1 ferredoxin thioredoxin reductase catalytic beta chain family protein1.4e-5974.66Show/hide
Query:  MILQA--SSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQG
        M LQA   SF       G +   S    V+RA+ EPS+KSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDKAAEV QG
Subjt:  MILQA--SSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQG

Query:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
        FWNCPCVPMRERKECHCMLFLTP+NDFAG DQ IT ++IK TTANM
Subjt:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTACAAGCTTCGTCGTTCAATATCGCCGTTCCACTCTCCGGTTCTTCCACCGGACGTTCCCGTCACAGCCATGTCGTTCGAGCTCAAGGGGAACCGTCCGACAA
GTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGCAAGTCAGGAACGTATTTCTGTGTGGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATC
ACAAAGATACATTGGGTGCACCACTCTGTCCCTGTCGGCATTATGACGACAAAGCTGCTGAGGTTGCACAAGGTTTTTGGAATTGTCCATGTGTTCCAATGAGAGAAAGG
AAAGAGTGTCACTGCATGCTTTTCCTAACTCCTGAGAACGACTTTGCAGGCAACGACCAGGTGATCACCATGGAAGATATCAAGGCAACAACAGCAAACATGTAA
mRNA sequenceShow/hide mRNA sequence
AATTAATTGCAATTATAAGCCCTTTAACTCCCACAATATTTAACAACAAAAAGAAATAACTATGAACAAATCCACAGATTATCCTTCTTCTTCCTCCTCCCAATTTACAG
ATTTCTTCTCTTCCTCGTTTTCCGTTGCTTTGTCCTAATGATTCTACAAGCTTCGTCGTTCAATATCGCCGTTCCACTCTCCGGTTCTTCCACCGGACGTTCCCGTCACA
GCCATGTCGTTCGAGCTCAAGGGGAACCGTCCGACAAGTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGCAAGTCAGGAACGTATTTCTGTGTGGACAAG
GGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATCACAAAGATACATTGGGTGCACCACTCTGTCCCTGTCGGCATTATGACGACAAAGCTGCTGAGGTTGCACAAGG
TTTTTGGAATTGTCCATGTGTTCCAATGAGAGAAAGGAAAGAGTGTCACTGCATGCTTTTCCTAACTCCTGAGAACGACTTTGCAGGCAACGACCAGGTGATCACCATGG
AAGATATCAAGGCAACAACAGCAAACATGTAACCTTCAATTTCCACTTGTTAATTTCATTCACAGTACTTCAAACTGTGCTATGATGATTGAAAGGGGTGGAAATATACA
AGTATAATTATGTATGTAACACTACATGCTGATGAGATCATGAATTGTTGTGCCATATCTGCCACTGACAAATGATCACATTTCTTTTCCATGGTATTTGTAACATGTAA
GTTTTGACCCAACAATATTTGGTTTGGCTTAGTTTGGCTAGAACCATACATGGATGGGTGTTTTGGGAGAGGATCCAATGCTGGAGTTGTTAGTGGTGAAAAATATGAGT
TAGAAGAAAGAACCCTATATGGATAGGTATTCCTTTTCGGGTTAGAGGTTTGAATTTGCATACTCCATACTTTTTCCTTTTACTTTCGAGATTGGAAAAGTAATAATAAT
TATAATCAATAAAGATGTTGCTATTCCCATTC
Protein sequenceShow/hide protein sequence
MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRER
KECHCMLFLTPENDFAGNDQVITMEDIKATTANM