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CmoCh04G028990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G028990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:20621265..20621979
RNA-Seq ExpressionCmoCh04G028990
SyntenyCmoCh04G028990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039487.1 hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa]3.6e-0661.11Show/hide
Query:  MEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTR-SGYLTPPSSP
        +E+  H G +  SSS K  GGK RK+M+E+MDYADPGPN NTR SGYL PP  P
Subjt:  MEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTR-SGYLTPPSSP

KAG6602500.1 hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3597.56Show/hide
Query:  MDHPKIFPILLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS
        MDHPKIFPILLLLFI+LGFGVGAMEAAAHPGYD TSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS
Subjt:  MDHPKIFPILLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS

KGN52468.1 hypothetical protein Csa_007886 [Cucumis sativus]3.7e-1155.29Show/hide
Query:  MDHPKIFPILLLL--FIVLGFGVG----AMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP
        M HPK+F  LLLL  F++L F  G     +E+  H      S S K  GGK RK+M+E+MDYADPGPNTNTRSGYL PP  PP P
Subjt:  MDHPKIFPILLLL--FIVLGFGVG----AMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP

XP_023527249.1 uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo]4.0e-2991.14Show/hide
Query:  PKIFPILLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS
        PKIFPILLLLFI+ GFGVGAMEAAAH G D  SSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPP PPSS
Subjt:  PKIFPILLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS

XP_023527257.1 uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo]1.3e-2787.34Show/hide
Query:  PKIFPILLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS
        PKIFPILLLLFI+ GFGVGAMEAAAH G D +SS  +KSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPP PPSS
Subjt:  PKIFPILLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS

TrEMBL top hitse value%identityAlignment
A0A0A0KSB7 Uncharacterized protein1.8e-1155.29Show/hide
Query:  MDHPKIFPILLLL--FIVLGFGVG----AMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP
        M HPK+F  LLLL  F++L F  G     +E+  H      S S K  GGK RK+M+E+MDYADPGPNTNTRSGYL PP  PP P
Subjt:  MDHPKIFPILLLL--FIVLGFGVG----AMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP

A0A540K4V3 Uncharacterized protein9.6e-0550Show/hide
Query:  LLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP
        LL LF   GFG   ME A H   D++    K++ GK RK M+ VMDYADP PN N R+GY+  P  PP P
Subjt:  LLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP

A0A5D3CUT5 Uncharacterized protein1.7e-0661.11Show/hide
Query:  MEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTR-SGYLTPPSSP
        +E+  H G +  SSS K  GGK RK+M+E+MDYADPGPN NTR SGYL PP  P
Subjt:  MEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTR-SGYLTPPSSP

A0A7J7NY32 Uncharacterized protein4.8e-0449.32Show/hide
Query:  ILLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSG-YLTPPSSPPLPP
        IL L F   GFG G     +  G D ++S  K +G    + MMEVMDY+DP PNTN ++G  LTPPS PP PP
Subjt:  ILLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSG-YLTPPSSPPLPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCGTTCTTGGATTTGGCGTGGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCACCAGTTC
ATCGCAAAAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATCCAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCCCTT
CTTCCCCTCCTCTGCCGCCCTCTTCCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAATCTTATCCTCTCACTGCCTTAGTGCTTCATTAAATTCCTCTGGATCTGAACACTCCTCATACCTTCCTTTTACTTTCCCTTCACAACTCTCTCTCTAGCCGC
CTTATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCGTTCTTGGATTTGGCGTGGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCACCAG
TTCATCGCAAAAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATCCAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCC
CTTCTTCCCCTCCTCTGCCGCCCTCTTCCTGAATCTCAAATAATAATTTCTTCTCTGTTCTTCGTTTCTCATATCATATTCTAACTTCCAAGTGTAATTCATGCATGGAA
TTGCACCTTTTGCTGTCAGATTTCCAGTAATTTGCTTCTAATATTCGATCAAATAATTTCATTATTTTATGATTAATTATAACTTGGGTTTTGTGCAGTATTAATAAACT
AAGCATTCG
Protein sequenceShow/hide protein sequence
MDHPKIFPILLLLFIVLGFGVGAMEAAAHPGYDTTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS