CuGenDBv2

Gene ID	CmoCh04G029740
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	thylakoid membrane protein slr0575
Genome location	Cmo_Chr04:21013713..21018160
RNA-Seq Expression	CmoCh04G029740
Synteny	CmoCh04G029740
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021275 - Protein of unknown function DUF2854

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039379.1 thylakoid membrane protein [Cucumis melo var. makuwa]

8.5e-135

85.62

Show/hide

Query:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS
        ++ ISP   L   SH +FTL NRLSL+SL FSRP    SLPGGGN   R N FVHFE +  L KP RLAFTFS RAAD+TQPS+VSASPDKAVVTDDEFS
Subjt:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE

Query:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISN+IPGASP
Subjt:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP

XP_004141498.1 uncharacterized protein LOC101213350 [Cucumis sativus]

1.3e-135

86.3

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Query:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS
        ++ ISP   L  CSHD+FTL NRLSLVSL FSRP    SLPGG N   R N FVHFE    L KP RLAF+FS RAAD+TQPS+VSASP KAVVTDDEFS
Subjt:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE

Query:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGI AEVGKG+NDLYEVRL SNTIPGASP
Subjt:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP

XP_022956448.1 uncharacterized protein LOC111458174 [Cucurbita moschata]

1.4e-161

100

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Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

XP_022989929.1 uncharacterized protein LOC111486968 [Cucurbita maxima]

1.5e-160

99.31

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Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVH EPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

XP_023524489.1 uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo]

2.6e-160

98.97

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Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGN NGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFN+LPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDV+RYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX1 Uncharacterized protein

6.4e-136

86.3

Show/hide

Query:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS
        ++ ISP   L  CSHD+FTL NRLSLVSL FSRP    SLPGG N   R N FVHFE    L KP RLAF+FS RAAD+TQPS+VSASP KAVVTDDEFS
Subjt:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE

Query:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGI AEVGKG+NDLYEVRL SNTIPGASP
Subjt:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP

A0A1S3CAR1 thylakoid membrane protein slr0575

1.6e-134

85.27

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Query:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS
        ++ ISP   L   SH +FTL NRLSL+SL FSRP     LPGGGN   R N FVHFE +  L KP RLAFTFS RAAD+TQPS+VSASPDKAVVTDDEFS
Subjt:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE

Query:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISN+IPGASP
Subjt:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP

A0A5A7TDN5 Thylakoid membrane protein

4.1e-135

85.62

Show/hide

Query:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS
        ++ ISP   L   SH +FTL NRLSL+SL FSRP    SLPGGGN   R N FVHFE +  L KP RLAFTFS RAAD+TQPS+VSASPDKAVVTDDEFS
Subjt:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE

Query:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISN+IPGASP
Subjt:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP

A0A6J1GWV5 uncharacterized protein LOC111458174

6.8e-162

100

Show/hide

Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

A0A6J1JQQ4 uncharacterized protein LOC111486968

7.5e-161

99.31

Show/hide

Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVH EPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

SwissProt top hits

e value

%identity

Alignment

Q55403 Thylakoid membrane protein slr0575

3.7e-24

40.86

Show/hide

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL--TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHL
        L K+S   +GL VG  L   GF AY   L  +  +     YG PL + G+ALK AELKP+P    T  +   LR   ATP   Q+R DV RYRYG E HL
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL--TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHL

Query:  DEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLIS
        DE+L+R+   GL+     R  P+L S+ E+  E GKY L L F +  ++L  ++++Q K A FFGP +   V + +  +  V LIS
Subjt:  DEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLIS

Arabidopsis top hits

e value

%identity

Alignment

AT5G38660.1 acclimation of photosynthesis to environment

4.6e-94

77.58

Show/hide

Query:  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL
        K + L      RAAD+T  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL
Subjt:  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL

Query:  TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFG
        +Y +A KLRESCATPIL QVR+DV RYRYGDEQHL+EALKRIFQ+GL GGIPRRSAPILQ IREEV  DG+YC+VLVFEAKALTLSDFEKRQAKF SFFG
Subjt:  TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFG

Query:  PGIAAEVGKGDND-LYEVRLISN
        P I AEVGKG+++ LYEVRLISN
Subjt:  PGIAAEVGKGDND-LYEVRLISN

AT5G38660.2 acclimation of photosynthesis to environment

1.1e-87

77.78

Show/hide

Query:  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL
        K + L      RAAD+T  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL
Subjt:  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL

Query:  TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFG
        +Y +A KLRESCATPIL QVR+DV RYRYGDEQHL+EALKRIFQ+GL GGIPRRSAPILQ IREEV  DG+YC+VLVFEAKALTLSDFEKRQAKF SFFG
Subjt:  TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFG

Query:  PGIAAEV
        P I AEV
Subjt:  PGIAAEV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGTGGAATATCGCCTCCTGCTGCTCTCTGTTCTCATGACAAATTCACTCTCCCCAATCGCCTCTCCCTTGTTTCTCTGCGTTTCTCTCGTCCCTACTGCGCAACCTC
TCTGCCAGGCGGCGGCAACCGGAACGGTAGAGCCAACTTTTTCGTCCATTTCGAACCGAGAGCTCCTCTGCAGAAGCCTCAACGTTTAGCTTTCACATTCTCGGCTAGAG
CTGCTGATACTACTCAGCCGTCTTCCGTTTCAGCCTCGCCGGATAAAGCAGTAGTTACCGATGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGT
GTTGGAATTTCTTTGTTGTCGTATGGATTCGGTGCATACTTCAATATCCTCCCAGGATCCGAGTGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCAATTATTGG
CATGGCTCTGAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATATTTAGAAGCTCAAAAGCTGAGGGAATCATGCGCCACCCCTATTCTCAAACAGGTAAGAGATG
ATGTGATAAGGTACCGCTATGGGGATGAACAACATTTGGATGAGGCATTGAAACGGATTTTCCAGTTTGGTCTGGCTGGGGGAATTCCTCGAAGGAGTGCACCTATTTTG
CAAAGTATTCGTGAAGAAGTTACAGAAGACGGAAAATATTGCCTGGTCTTGGTGTTTGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGAAAAGACAGGCAAAATTTGC
TTCTTTCTTTGGACCAGGGATCGCTGCCGAAGTTGGGAAGGGAGACAATGATCTGTATGAAGTCCGGCTTATTTCTAACACTATTCCTGGTGCTTCACCATCATAA

mRNA sequence

Show/hide mRNA sequence

CGGACCTTCATTTTCTTCTCCGTTCTTCAGAGTTTCAGAGACAGGTAGAAAGAGAGTCGATTTCGATGAGTGGAATATCGCCTCCTGCTGCTCTCTGTTCTCATGACAAA
TTCACTCTCCCCAATCGCCTCTCCCTTGTTTCTCTGCGTTTCTCTCGTCCCTACTGCGCAACCTCTCTGCCAGGCGGCGGCAACCGGAACGGTAGAGCCAACTTTTTCGT
CCATTTCGAACCGAGAGCTCCTCTGCAGAAGCCTCAACGTTTAGCTTTCACATTCTCGGCTAGAGCTGCTGATACTACTCAGCCGTCTTCCGTTTCAGCCTCGCCGGATA
AAGCAGTAGTTACCGATGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGAATTTCTTTGTTGTCGTATGGATTCGGTGCATACTTCAAT
ATCCTCCCAGGATCCGAGTGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCAATTATTGGCATGGCTCTGAAGTATGCTGAACTCAAACCAGTGCCATGCTTGAC
ATATTTAGAAGCTCAAAAGCTGAGGGAATCATGCGCCACCCCTATTCTCAAACAGGTAAGAGATGATGTGATAAGGTACCGCTATGGGGATGAACAACATTTGGATGAGG
CATTGAAACGGATTTTCCAGTTTGGTCTGGCTGGGGGAATTCCTCGAAGGAGTGCACCTATTTTGCAAAGTATTCGTGAAGAAGTTACAGAAGACGGAAAATATTGCCTG
GTCTTGGTGTTTGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGAAAAGACAGGCAAAATTTGCTTCTTTCTTTGGACCAGGGATCGCTGCCGAAGTTGGGAAGGGAGA
CAATGATCTGTATGAAGTCCGGCTTATTTCTAACACTATTCCTGGTGCTTCACCATCATAAAATATACGGTTTTAATCGAATTCTGCTACATATAATTGTTTCATTTACA
AACTGCTGTCCACTAGTGAAGTTCTGGTAAGTATATATTTCTTTGGAAACACTGCACTCAAAATCATCCGATCTCTAATGTTTTTAAACAGTGAAAAATACAGAAAAAAA
ATATTTAGAAAGAGAAAAATCTGACATCCAAGATGGTTTCCTTCCTGAATTTAGAATGGCATCTCCAAAAGACCATGAAGAAGATGATGTAAGAACAGTTCGTTCTTAAT
ATAGGACATTCTAGCTTACCTATACCTATTCCGGAACTACTTCACATGTTGCACACTTAGTTATTGGATTAATGAAATTACCCTTAGTATAGTCACAGAAATAAGAAATG
TATCCTAGCAAACTACAAGCTACAGTCTAGAAGGCACCCAATGCGGTACACATGCCCATAAACATGGTGCATTATTGGCTTGCGTATGCCAATGCCAATATTGATTATAG
CTTTACCTCAACTTAGTGAAGTAGAATAGCCTTATATTTTTTTCGAGTTAAATGAGAGTGAGGATTTGAACATTTGACTCTTAGACAAGGATGTATGCTATACC

Protein sequence

Show/hide protein sequence

MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLG
VGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPIL
QSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

CmoCh04G029740 (gene) of Cucurbita moschata (Rifu) v1 genome