; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G030030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G030030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHIG1 domain-containing protein
Genome locationCmo_Chr04:21135280..21135923
RNA-Seq ExpressionCmoCh04G030030
SyntenyCmoCh04G030030
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007667 - Hypoxia induced protein, domain
IPR040153 - Respiratory supercomplex factor 2, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578469.1 hypothetical protein SDJN03_22917, partial [Cucurbita argyrosperma subsp. sororia]7.5e-2663.16Show/hide
Query:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG
        MEAIQAW+S+HKLTSI                           GALWASGIGASL YTRS TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEN+  G
Subjt:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG

Query:  VADRTEVSASAVPG
        V      SA  VPG
Subjt:  VADRTEVSASAVPG

KAG6602595.1 hypothetical protein SDJN03_07828, partial [Cucurbita argyrosperma subsp. sororia]7.2e-2995.83Show/hide
Query:  GALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKGVADRTEVSASAVPGK
        GALWASGIGASLVYT+SRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE EKKGVADRT+VSASAVPGK
Subjt:  GALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKGVADRTEVSASAVPGK

KAG7016034.1 BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-2664.29Show/hide
Query:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG
        MEAIQAW+S+HKLTSI                           GALWASGIGASL YTRS TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEN+  G
Subjt:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG

Query:  VADRTEVSASAV
        V  R+E   SAV
Subjt:  VADRTEVSASAV

KAG7033273.1 hypothetical protein SDJN02_07327, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-3473.91Show/hide
Query:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG
        MEAIQAWISEHKLTSI                           GALWASGIGASLVYT+SRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE EKKG
Subjt:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG

Query:  VADRTEVSASAVPGK
        VADRT+VSASAVPGK
Subjt:  VADRTEVSASAVPGK

XP_004138401.1 uncharacterized protein LOC101218681 [Cucumis sativus]3.2e-2461.74Show/hide
Query:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG
        MEAIQAW+SEHKLT+I                           GALWASGIGASL YTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+N  K 
Subjt:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG

Query:  VADRTEVSASAVPGK
          DR+E    +  GK
Subjt:  VADRTEVSASAVPGK

TrEMBL top hitse value%identityAlignment
A0A067JNW4 HIG1 domain-containing protein1.2e-2155.88Show/hide
Query:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG
        ME +Q+W+S+HKLTSI                           GALWA+ +G SL YTR+RTPLKPSLRLIHARMHAQA+TLAVLSGAA+YHYYE +++ 
Subjt:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG

Query:  VA
        VA
Subjt:  VA

A0A0A0K7T4 HIG1 domain-containing protein1.5e-2461.74Show/hide
Query:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG
        MEAIQAW+SEHKLT+I                           GALWASGIGASL YTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+N  K 
Subjt:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG

Query:  VADRTEVSASAVPGK
          DR+E    +  GK
Subjt:  VADRTEVSASAVPGK

A0A5A7UEZ1 Respiratory supercomplex factor 2-like protein3.4e-2460.87Show/hide
Query:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG
        MEAIQAW+SEHKLT+I                           GALWASG+GASL YTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+N  K 
Subjt:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKG

Query:  VADRTEVSASAVPGK
          DR+E    +  GK
Subjt:  VADRTEVSASAVPGK

A0A5N5F021 HIG1 domain-containing protein1.2e-2159.18Show/hide
Query:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEK
        MEAIQ+W+SEHKLTSI                           G +WAS +GASL Y+R+RTPLKPSLRLIHARMHAQALTLAVLSGAA+YHYYE+ +
Subjt:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEK

A0A7J7I509 HIG1 domain-containing protein7.1e-2263.16Show/hide
Query:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE
        MEA+Q+W+SEHKLTSI                           G LWASGIGASL Y+R++TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE
Subjt:  MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05550.1 Hypoxia-responsive family protein7.8e-1339.58Show/hide
Query:  EAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENE
        E I+ W+S+HKL +                           VG LW SGI  S+ Y  S+  +K S+++IHAR+HAQALTLA L+GAAV  YY+++
Subjt:  EAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENE

AT5G27760.1 Hypoxia-responsive family protein2.7e-1341.58Show/hide
Query:  IQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKGVAD
        I+ WI EHKL +                           VG LW SGI  S+ Y  S+  +K S+R+IHAR+HAQALTLA L+GAA   YY++ K G  D
Subjt:  IQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKGVAD

Query:  R
        R
Subjt:  R


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCATTCAAGCTTGGATTTCTGAACACAAACTCACCAGCATTGGTTTGTCTCCTCCTTTCAAGCATCCTCTGTTTTCCTTCTATTTTCTTTCCCATAACATTAT
ATATGAATTCTTTCGTGTAGGAGCTCTGTGGGCGTCTGGGATTGGAGCCTCGCTGGTCTACACAAGATCAAGAACTCCCCTGAAGCCAAGTCTCCGGCTTATCCATGCCA
GGATGCATGCTCAGGCTTTGACATTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAATGAGAAGAAAGGCGTTGCCGATCGAACCGAGGTTTCCGCTTCC
GCCGTGCCGGGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCATTCAAGCTTGGATTTCTGAACACAAACTCACCAGCATTGGTTTGTCTCCTCCTTTCAAGCATCCTCTGTTTTCCTTCTATTTTCTTTCCCATAACATTAT
ATATGAATTCTTTCGTGTAGGAGCTCTGTGGGCGTCTGGGATTGGAGCCTCGCTGGTCTACACAAGATCAAGAACTCCCCTGAAGCCAAGTCTCCGGCTTATCCATGCCA
GGATGCATGCTCAGGCTTTGACATTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAATGAGAAGAAAGGCGTTGCCGATCGAACCGAGGTTTCCGCTTCC
GCCGTGCCGGGGAAGTAGGATTGGCGGCGCACCCGGGACGGAAAGGGAATGGATTAGCTGATGACGTCGGGTTCTTGGGGGATCAAATCAGTTTGTGTAAATGAAATGAA
GGATGTTAAATTTGATCCTTTTAATTGATGTGTCTGTGGCCGTAAGTGGCAAAGCTTTATGCTCGGTGTCGGCGAATTGTTAATCCTTAAATAAAATAAAAGAAAATAAA
ATAAAAGAATGAG
Protein sequenceShow/hide protein sequence
MEAIQAWISEHKLTSIGLSPPFKHPLFSFYFLSHNIIYEFFRVGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYENEKKGVADRTEVSAS
AVPGK