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CmoCh04G031480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G031480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionphospholipase SGR2-like
Genome locationCmo_Chr04:21786777..21789264
RNA-Seq ExpressionCmoCh04G031480
SyntenyCmoCh04G031480
Gene Ontology termsGO:0009590 - detection of gravity (biological process)
GO:0009660 - amyloplast organization (biological process)
GO:0009959 - negative gravitropism (biological process)
GO:0009705 - plant-type vacuole membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022954711.1 phospholipase SGR2-like [Cucurbita moschata]8.6e-57100Show/hide
Query:  MSNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRF
        MSNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRF
Subjt:  MSNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRF

Query:  GMRDSLAIEASFLQ
        GMRDSLAIEASFLQ
Subjt:  GMRDSLAIEASFLQ

XP_023549980.1 phospholipase SGR2-like isoform X1 [Cucurbita pepo subsp. pepo]1.6e-5595.69Show/hide
Query:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM
        NSSKDMVGGDMLSLAAIGSSEVSEA+PDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGM
Subjt:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM

Query:  RDSLAIEASFLQKLPE
        RDSLAIEASFLQ+  E
Subjt:  RDSLAIEASFLQKLPE

XP_023549990.1 phospholipase SGR2-like isoform X2 [Cucurbita pepo subsp. pepo]1.6e-5595.69Show/hide
Query:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM
        NSSKDMVGGDMLSLAAIGSSEVSEA+PDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGM
Subjt:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM

Query:  RDSLAIEASFLQKLPE
        RDSLAIEASFLQ+  E
Subjt:  RDSLAIEASFLQKLPE

XP_023550015.1 phospholipase SGR2-like isoform X5 [Cucurbita pepo subsp. pepo]1.6e-5595.69Show/hide
Query:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM
        NSSKDMVGGDMLSLAAIGSSEVSEA+PDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGM
Subjt:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM

Query:  RDSLAIEASFLQKLPE
        RDSLAIEASFLQ+  E
Subjt:  RDSLAIEASFLQKLPE

XP_023550024.1 phospholipase SGR2-like isoform X6 [Cucurbita pepo subsp. pepo]1.6e-5595.69Show/hide
Query:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM
        NSSKDMVGGDMLSLAAIGSSEVSEA+PDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGM
Subjt:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM

Query:  RDSLAIEASFLQKLPE
        RDSLAIEASFLQ+  E
Subjt:  RDSLAIEASFLQKLPE

TrEMBL top hitse value%identityAlignment
A0A0A0LPY5 Uncharacterized protein4.4e-5190.52Show/hide
Query:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM
        NSSKDM G DML  AAIGS EV EASPDSLKNTPSNIAKLEDVIEHC GRQKYLAQTRSPSDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGM
Subjt:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM

Query:  RDSLAIEASFLQKLPE
        RDSLAIEASFLQ+  E
Subjt:  RDSLAIEASFLQKLPE

A0A6J1DDX7 phospholipase SGR2 isoform X22.2e-5086.32Show/hide
Query:  SNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFG
        +NS++D+ GGDML+ +AIGSSEV EASPDSLKNTPSNIAKLEDVIEHCEGRQKYLA TRSPSDGGDVRWYFC+VPLLG ELAASVPKTEIVGKGDYFRFG
Subjt:  SNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFG

Query:  MRDSLAIEASFLQKLPE
        MRDSLAIEASFL++  E
Subjt:  MRDSLAIEASFLQKLPE

A0A6J1DG04 phospholipase SGR2 isoform X12.2e-5086.32Show/hide
Query:  SNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFG
        +NS++D+ GGDML+ +AIGSSEV EASPDSLKNTPSNIAKLEDVIEHCEGRQKYLA TRSPSDGGDVRWYFC+VPLLG ELAASVPKTEIVGKGDYFRFG
Subjt:  SNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFG

Query:  MRDSLAIEASFLQKLPE
        MRDSLAIEASFL++  E
Subjt:  MRDSLAIEASFLQKLPE

A0A6J1GRN2 phospholipase SGR2-like4.1e-57100Show/hide
Query:  MSNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRF
        MSNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRF
Subjt:  MSNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRF

Query:  GMRDSLAIEASFLQ
        GMRDSLAIEASFLQ
Subjt:  GMRDSLAIEASFLQ

A0A6J1JU90 LOW QUALITY PROTEIN: phospholipase SGR2-like4.3e-5493.97Show/hide
Query:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM
        NSSKDMV GDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFC+VPLLG ELAASVPKTEIVGKG+YFRFGM
Subjt:  NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGM

Query:  RDSLAIEASFLQKLPE
        RDSLAIEASFLQ+  E
Subjt:  RDSLAIEASFLQKLPE

SwissProt top hitse value%identityAlignment
Q8W5R2 Phospholipase SGR21.4e-4179Show/hide
Query:  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE
        +G+ EV+E SPD LKNTPSNIA+LEDVIE C GRQKYLAQTRSPSDG DVRWYFC+VPL  NELAASVP+T++VGK +YFRFGMRDSLAIEASFLQ+  E
Subjt:  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE

Arabidopsis top hitse value%identityAlignment
AT1G31480.1 shoot gravitropism 2 (SGR2)9.8e-4379Show/hide
Query:  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE
        +G+ EV+E SPD LKNTPSNIA+LEDVIE C GRQKYLAQTRSPSDG DVRWYFC+VPL  NELAASVP+T++VGK +YFRFGMRDSLAIEASFLQ+  E
Subjt:  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAATAGTTCGAAAGATATGGTTGGCGGTGACATGTTGTCTTTGGCAGCTATAGGTTCTTCTGAAGTTTCAGAAGCGTCCCCTGATTCGCTAAAGAACACGCCCTC
TAACATTGCAAAATTGGAGGATGTCATCGAGCACTGCGAAGGTAGGCAGAAGTATCTTGCACAGACAAGGAGTCCTTCCGACGGCGGCGATGTTCGCTGGTATTTCTGTG
AAGTACCTTTGCTTGGGAATGAGCTAGCAGCATCAGTTCCTAAGACTGAAATAGTTGGGAAGGGTGACTATTTTCGATTTGGCATGAGGGATTCTCTTGCAATAGAGGCA
TCTTTCTTGCAGAAACTACCGGAGAGATCATGA
mRNA sequenceShow/hide mRNA sequence
CCGCGACGATTGCAAGAGCCAGAAAAGTTTTCCACGAAAAAACCAAACGACTACAGAACAAAAATAATGGGAACTTTTTAATTTCAAGTTAACCACCGTGCCGGTGCGGT
TGCGTCTGTCACCGCCTGTATCCAACCCTACCAGAAGCCGAAGCCACAGCCACACTGCTTTTTCTCACCGAATCTGTCTCCGCTATTCCCTTGGATCGAACATGCAAGGC
AATGGTCTCAATGGCTTTTGATTCCCATCTTCTCCAGCAGCCGTCTGGAACCTGACGTGGTCCCATGTAATTCCAGCCCCTCTACATTGTGCTTGCTGAAGCCCATTTAT
TGAACCCTACCAGCCAAACCCTGTTTCGCCATTCCTTTCAAGTTAGAATCAGATTTCTCTGCAGGCTGGCGTGTGTGATACTTCATTTGGGTGCCTTCTGTTTCTCGTCA
TCGTAATTGTTTGTTTCGTTATGTGGCTGTGTGCTTCTAGGATCTTGAAGGATTTTAGCTGGGTGTTGGATTCAAGTCATAGTTGACCATTTTCTTGACGGAAGCAAATT
CACTAAATCCTCTGAGCTAACCTGTCCTGTAATTGCTTCGGAGCCTCTTTCTTAGTGATAGGTTCCGAGGCAAAAATTATTCGATCAGGCGCCAAAATGGATGTCAAATA
GTTCGAAAGATATGGTTGGCGGTGACATGTTGTCTTTGGCAGCTATAGGTTCTTCTGAAGTTTCAGAAGCGTCCCCTGATTCGCTAAAGAACACGCCCTCTAACATTGCA
AAATTGGAGGATGTCATCGAGCACTGCGAAGGTAGGCAGAAGTATCTTGCACAGACAAGGAGTCCTTCCGACGGCGGCGATGTTCGCTGGTATTTCTGTGAAGTACCTTT
GCTTGGGAATGAGCTAGCAGCATCAGTTCCTAAGACTGAAATAGTTGGGAAGGGTGACTATTTTCGATTTGGCATGAGGGATTCTCTTGCAATAGAGGCATCTTTCTTGC
AGAAACTACCGGAGAGATCATGACACTGCTCTTTTCATATTGAAACACTTATATCGAGATATTCCTGAAGATCCCGATACACCTCCAGAATATACTGAACCCGATTCAAA
TGATTGCTGGTACAACCGAAGAGAAACTATTGAAGAAGAGCTTTCTTTGACATTTTCCGATGAGAATGTGGTACGAAACTTCTCTAGAAAAGCAAAGAAAATGATGAAAA
ATCATAGATAGACAACAAGCACATCGAATGGGGATTAGGTTAGTGAAGGCTGAACGACCGGGATTGGCATGTTAATGAATATGCAAATTTCCTCTATAAAAATGGGGAGA
TTTGCTGTTGGCGGGCTTGGGGTCACTTTACTCGGTATTCTCTCCTTTCTTTCCATGTACATAAAGAGGAAGACCAAATGGGGATCATAATATGTAACTTGTAAATTAAA
ACGTGTAAACAAGGCCAAACTGCTGTTCTCTGCCAGTAATAGAAAGTAGGCAGGCGAAGAGGTTAAAGTAGCAAAGTTCTAATGTAACCATTTATTATTCTTTAAAACCT
CATCAAAGTAGAAGAACG
Protein sequenceShow/hide protein sequence
MSNSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEA
SFLQKLPERS