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CmoCh05G000650 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G000650
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFormin-like protein
Genome locationCmo_Chr05:239007..239609
RNA-Seq ExpressionCmoCh05G000650
SyntenyCmoCh05G000650
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8529680.1 hypothetical protein F0562_034220 [Nyssa sinensis]2.6e-2652.69Show/hide
Query:  MAGATTNSRSWPLLSLEDASAIMASSLAEASGAYMNPDAVNPPNPNPIITPLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAA
        MAG  TNSRS PLLS   ASA +A SLAEA G  MNP A  PP+P+P++ PL LRI  IWL AG  ML  T AMAGI G+KRA PRLSPS AISAIC AA
Subjt:  MAGATTNSRSWPLLSLEDASAIMASSLAEASGAYMNPDAVNPPNPNPIITPLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAA

Query:  KAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGLGISFGVLWFLVELMLVHLTLSTAIVAMVAAIEVDLL
        KAGS EL+ EK APAMAV   +                             +S G          VHL LS AIVAMVAAI+V L+
Subjt:  KAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGLGISFGVLWFLVELMLVHLTLSTAIVAMVAAIEVDLL

KAF3526374.1 hypothetical protein F2Q69_00050753 [Brassica cretica]1.8e-0647.37Show/hide
Query:  MLNRTHAMAGIRGSKRAIPRLS--PSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGLGISFGVLWF
        ML  TH +AG  G  RA PRLS  P+AA SAI WAAKAGS++LR EKTAPA AV+          +   E   FG   R  +  G     G+LWF
Subjt:  MLNRTHAMAGIRGSKRAIPRLS--PSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGLGISFGVLWF

KYP67588.1 hypothetical protein KK1_023933 [Cajanus cajan]5.1e-1447.37Show/hide
Query:  PLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL
        PL LR+ F W  AGC ML  THAMAGI GS  A PRLS  +A++AICWAAKA S   RAEKTAPA+AV               E+  FG      R +G 
Subjt:  PLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL

Query:  -GISFGVLWFLVELMLVHLTLSTAIVAMVAAIE
         G+S G+   L  L+L H  L  A+  +VAAI+
Subjt:  -GISFGVLWFLVELMLVHLTLSTAIVAMVAAIE

KYP75732.1 hypothetical protein KK1_019931, partial [Cajanus cajan]3.7e-2852.11Show/hide
Query:  MAGATTNSRSWPLLSL---EDASAIMASSLAEASGAYMNPDAVNP-PNPNPIITPLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAI
        +AGATTN RS P LSL     ASAI   S AEASG    P+A  P P+P+PI TPL LR+   WLSAGC ML RTHAMAGI GS  A PRLSPS AI AI
Subjt:  MAGATTNSRSWPLLSL---EDASAIMASSLAEASGAYMNPDAVNP-PNPNPIITPLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAI

Query:  CWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERR---EMGLGISFGVLWFLVELMLVHLTLSTAIVAMVAAIEV
        C AAKA S   R +  APA AVV             D   PFGR W ++R   E     S G+LW LV        ++ A+VAMVAAI V
Subjt:  CWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERR---EMGLGISFGVLWFLVELMLVHLTLSTAIVAMVAAIEV

PWA41070.1 hypothetical protein CTI12_AA556770 [Artemisia annua]3.1e-1154.46Show/hide
Query:  MAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL-GISFGVLWFLVELMLVHLTLST
        MAG +G+K AIPRLSPS AISAICWAAKAGS EL+ E  APA+AV  +    L C+   + +S  G  WR RREMGL G  F  L     L ++HL LS 
Subjt:  MAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL-GISFGVLWFLVELMLVHLTLST

Query:  AIVA-MVAAIEV
        AIV   VAAI +
Subjt:  AIVA-MVAAIEV

TrEMBL top hitse value%identityAlignment
A0A151TKL7 Uncharacterized protein2.5e-1447.37Show/hide
Query:  PLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL
        PL LR+ F W  AGC ML  THAMAGI GS  A PRLS  +A++AICWAAKA S   RAEKTAPA+AV               E+  FG      R +G 
Subjt:  PLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL

Query:  -GISFGVLWFLVELMLVHLTLSTAIVAMVAAIE
         G+S G+   L  L+L H  L  A+  +VAAI+
Subjt:  -GISFGVLWFLVELMLVHLTLSTAIVAMVAAIE

A0A151U8Y3 Uncharacterized protein (Fragment)1.8e-2852.11Show/hide
Query:  MAGATTNSRSWPLLSL---EDASAIMASSLAEASGAYMNPDAVNP-PNPNPIITPLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAI
        +AGATTN RS P LSL     ASAI   S AEASG    P+A  P P+P+PI TPL LR+   WLSAGC ML RTHAMAGI GS  A PRLSPS AI AI
Subjt:  MAGATTNSRSWPLLSL---EDASAIMASSLAEASGAYMNPDAVNP-PNPNPIITPLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAI

Query:  CWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERR---EMGLGISFGVLWFLVELMLVHLTLSTAIVAMVAAIEV
        C AAKA S   R +  APA AVV             D   PFGR W ++R   E     S G+LW LV        ++ A+VAMVAAI V
Subjt:  CWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERR---EMGLGISFGVLWFLVELMLVHLTLSTAIVAMVAAIEV

A0A2U1KWH4 Uncharacterized protein1.5e-1154.46Show/hide
Query:  MAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL-GISFGVLWFLVELMLVHLTLST
        MAG +G+K AIPRLSPS AISAICWAAKAGS EL+ E  APA+AV  +    L C+   + +S  G  WR RREMGL G  F  L     L ++HL LS 
Subjt:  MAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL-GISFGVLWFLVELMLVHLTLST

Query:  AIVA-MVAAIEV
        AIV   VAAI +
Subjt:  AIVA-MVAAIEV

A0A5J5AGF1 Uncharacterized protein1.3e-2652.69Show/hide
Query:  MAGATTNSRSWPLLSLEDASAIMASSLAEASGAYMNPDAVNPPNPNPIITPLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAA
        MAG  TNSRS PLLS   ASA +A SLAEA G  MNP A  PP+P+P++ PL LRI  IWL AG  ML  T AMAGI G+KRA PRLSPS AISAIC AA
Subjt:  MAGATTNSRSWPLLSLEDASAIMASSLAEASGAYMNPDAVNPPNPNPIITPLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAA

Query:  KAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGLGISFGVLWFLVELMLVHLTLSTAIVAMVAAIEVDLL
        KAGS EL+ EK APAMAV   +                             +S G          VHL LS AIVAMVAAI+V L+
Subjt:  KAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGLGISFGVLWFLVELMLVHLTLSTAIVAMVAAIEVDLL

A0A5N6MXV6 Formin-like protein1.5e-0671.15Show/hide
Query:  MLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAV
        ML  THA AG  G+K AIPRLSPS A++AIC AAKAGS EL+ EK APAMAV
Subjt:  MLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAMAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTACAGCACCCAAAGAATGGCGGGAGCTACGACAAACAGCAGAAGCTGGCCCCTGCTATCACTTGAAGATGCATCCGCAATCATGGCGAGCTCACTGGCA
GAGGCATCAGGTGCGTACATGAACCCTGATGCAGTCAACCCCCCTAATCCCAACCCAATTATCACACCCTTGTCACTGCGCATTCTGTTTATCTGGTTGAGTGCT
GGCTGTAATATGTTGAACAGAACCCATGCTATGGCCGGGATAAGAGGTAGCAAAAGGGCTATACCACGGTTGTCACCGTCGGCTGCTATATCTGCAATTTGTTGG
GCTGCGAAGGCAGGATCTGATGAGCTCAGGGCTGAGAAGACAGCTCCGGCGATGGCGGTGGTGGAGAGAAAGGCTGATAAGTTGGAATGTTCATTGGATTTTGAT
GAGATTAGTCCTTTCGGCAGGTTCTGGAGAGAGAGAAGGGAGATGGGCTTGGGGATCAGCTTTGGGGTGTTGTGGTTTCTGGTGGAGTTGATGCTTGTGCACTTG
ACACTCAGCACTGCCATTGTTGCCATGGTAGCTGCCATTGAAGTTGATTTGCTTGTTTCTGCTGAACTTTGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTACAGCACCCAAAGAATGGCGGGAGCTACGACAAACAGCAGAAGCTGGCCCCTGCTATCACTTGAAGATGCATCCGCAATCATGGCGAGCTCACTGGCA
GAGGCATCAGGTGCGTACATGAACCCTGATGCAGTCAACCCCCCTAATCCCAACCCAATTATCACACCCTTGTCACTGCGCATTCTGTTTATCTGGTTGAGTGCT
GGCTGTAATATGTTGAACAGAACCCATGCTATGGCCGGGATAAGAGGTAGCAAAAGGGCTATACCACGGTTGTCACCGTCGGCTGCTATATCTGCAATTTGTTGG
GCTGCGAAGGCAGGATCTGATGAGCTCAGGGCTGAGAAGACAGCTCCGGCGATGGCGGTGGTGGAGAGAAAGGCTGATAAGTTGGAATGTTCATTGGATTTTGAT
GAGATTAGTCCTTTCGGCAGGTTCTGGAGAGAGAGAAGGGAGATGGGCTTGGGGATCAGCTTTGGGGTGTTGTGGTTTCTGGTGGAGTTGATGCTTGTGCACTTG
ACACTCAGCACTGCCATTGTTGCCATGGTAGCTGCCATTGAAGTTGATTTGCTTGTTTCTGCTGAACTTTGCTCTTGA
Protein sequenceShow/hide protein sequence
MLYSTQRMAGATTNSRSWPLLSLEDASAIMASSLAEASGAYMNPDAVNPPNPNPIITPLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICW
AAKAGSDELRAEKTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGLGISFGVLWFLVELMLVHLTLSTAIVAMVAAIEVDLLVSAELCS