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CmoCh05G000930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G000930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionIQ domain-containing protein IQM1-like
Genome locationCmo_Chr05:389601..390467
RNA-Seq ExpressionCmoCh05G000930
SyntenyCmoCh05G000930
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB66844.1 hypothetical protein L484_019481 [Morus notabilis]9.0e-0862.07Show/hide
Query:  LWMYLVVIQEEDWLVNWPDSFLGILRPPC-LS-VERKAFSHCVSRDRWDKEFFKLQSG
        LWMYLV+I+EE+ LVN  DS LG+L P   LS +E+KAF+  V R RWDKEFF LQ G
Subjt:  LWMYLVVIQEEDWLVNWPDSFLGILRPPC-LS-VERKAFSHCVSRDRWDKEFFKLQSG

KAA3490539.1 IQ domain-containing protein IQM1-like [Gossypium australe]3.2e-0556.25Show/hide
Query:  EEDWLVNWPDSFLGILRP-PCLSVERKAFSHCVSRDRWDKEFFKLQSG
        E+D LVN P   L +L+P   L  ++K+FS C+ RDRWDKEFFKLQ G
Subjt:  EEDWLVNWPDSFLGILRP-PCLSVERKAFSHCVSRDRWDKEFFKLQSG

KAG6598285.1 hypothetical protein SDJN03_08063, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2972.83Show/hide
Query:  GGIDGDSAEPRGEIPFPLRLTRTSRFVNLYGSASLFLWMYLVVIQEEDWLVNWPDSFLGILRPPCLSVERKAFSHCVSRDRWDKEFFKLQSG
        G   G + +P   +P  L  T +        SASLFLWMYLVVIQEEDWLVNWPDSFLGILRPPCLSVERKAFSHCVSRDRWDKEFFKLQSG
Subjt:  GGIDGDSAEPRGEIPFPLRLTRTSRFVNLYGSASLFLWMYLVVIQEEDWLVNWPDSFLGILRPPCLSVERKAFSHCVSRDRWDKEFFKLQSG

KAG8491336.1 hypothetical protein CXB51_014496 [Gossypium anomalum]5.5e-0555.56Show/hide
Query:  MYLVVIQEEDWLVNWPDSFLGILRP--PCLSVERKAFSHCVSRDRWDKEFFKLQ
        MYLV I+ +D LVN     L +LRP    L  E+K+FS C+  DRWDKEFFKLQ
Subjt:  MYLVVIQEEDWLVNWPDSFLGILRP--PCLSVERKAFSHCVSRDRWDKEFFKLQ

MBA0835792.1 hypothetical protein [Gossypium armourianum]1.2e-0749.23Show/hide
Query:  LYGSASLFLWMYLVVIQEEDWLVNWPDSFLGILRP-PCLSVERKAFSHCVSRDRWDKEFFKLQSG
        L+  + L +WM +   +E+D LVN P   L +L+P   L  E+K+FS C+ RDRWDKEFFKLQ G
Subjt:  LYGSASLFLWMYLVVIQEEDWLVNWPDSFLGILRP-PCLSVERKAFSHCVSRDRWDKEFFKLQSG

TrEMBL top hitse value%identityAlignment
A0A0B0P6Y9 Graves disease carrier2.2e-0453.7Show/hide
Query:  MYLVVIQEEDWLVNWPDSFLGILRP--PCLSVERKAFSHCVSRDRWDKEFFKLQ
        MYLV ++ +D LVN     L  LRP    L  E+K+FS C+  DRWDKEFFKLQ
Subjt:  MYLVVIQEEDWLVNWPDSFLGILRP--PCLSVERKAFSHCVSRDRWDKEFFKLQ

A0A5B6X8U1 IQ domain-containing protein IQM1-like1.6e-0556.25Show/hide
Query:  EEDWLVNWPDSFLGILRP-PCLSVERKAFSHCVSRDRWDKEFFKLQSG
        E+D LVN P   L +L+P   L  ++K+FS C+ RDRWDKEFFKLQ G
Subjt:  EEDWLVNWPDSFLGILRP-PCLSVERKAFSHCVSRDRWDKEFFKLQSG

A0A7J6E2G2 Uncharacterized protein3.5e-0561.36Show/hide
Query:  MYLVVIQEEDWLVNWPDSFLGILRPPCLSVERKAF-SHCVSRDR
        MYL+ I+E+ WLVN P  FLG+LRP  LS E K F S+CV RDR
Subjt:  MYLVVIQEEDWLVNWPDSFLGILRPPCLSVERKAF-SHCVSRDR

A0A7J9JNP8 Uncharacterized protein (Fragment)5.7e-0849.23Show/hide
Query:  LYGSASLFLWMYLVVIQEEDWLVNWPDSFLGILRP-PCLSVERKAFSHCVSRDRWDKEFFKLQSG
        L+  + L +WM +   +E+D LVN P   L +L+P   L  E+K+FS C+ RDRWDKEFFKLQ G
Subjt:  LYGSASLFLWMYLVVIQEEDWLVNWPDSFLGILRP-PCLSVERKAFSHCVSRDRWDKEFFKLQSG

W9RE16 Uncharacterized protein4.4e-0862.07Show/hide
Query:  LWMYLVVIQEEDWLVNWPDSFLGILRPPC-LS-VERKAFSHCVSRDRWDKEFFKLQSG
        LWMYLV+I+EE+ LVN  DS LG+L P   LS +E+KAF+  V R RWDKEFF LQ G
Subjt:  LWMYLVVIQEEDWLVNWPDSFLGILRPPC-LS-VERKAFSHCVSRDRWDKEFFKLQSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGTCCACGGAGAACAAACCAATCTAGAGGAGAGGAAGACCCACAGATAGAGATAGGCGGCGGAATAGACGGGGATTCGGCGGAGCCGCGAGGAGAGATTCCCTT
TCCCTTGCGGTTAACCAGAACGTCTCGATTTGTAAATCTCTATGGCTCAGCTTCATTGTTCCTGTGGATGTATCTTGTCGTCATTCAAGAAGAAGATTGGCTTGTGAATT
GGCCCGATTCCTTTCTGGGTATTCTCAGGCCGCCTTGTCTGTCTGTTGAGAGAAAGGCCTTCTCACATTGTGTTTCAAGAGATAGATGGGATAAAGAATTCTTCAAGCTT
CAGAGCGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGTCCACGGAGAACAAACCAATCTAGAGGAGAGGAAGACCCACAGATAGAGATAGGCGGCGGAATAGACGGGGATTCGGCGGAGCCGCGAGGAGAGATTCCCTT
TCCCTTGCGGTTAACCAGAACGTCTCGATTTGTAAATCTCTATGGCTCAGCTTCATTGTTCCTGTGGATGTATCTTGTCGTCATTCAAGAAGAAGATTGGCTTGTGAATT
GGCCCGATTCCTTTCTGGGTATTCTCAGGCCGCCTTGTCTGTCTGTTGAGAGAAAGGCCTTCTCACATTGTGTTTCAAGAGATAGATGGGATAAAGAATTCTTCAAGCTT
CAGAGCGGATAA
Protein sequenceShow/hide protein sequence
MVGPRRTNQSRGEEDPQIEIGGGIDGDSAEPRGEIPFPLRLTRTSRFVNLYGSASLFLWMYLVVIQEEDWLVNWPDSFLGILRPPCLSVERKAFSHCVSRDRWDKEFFKL
QSG