; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G001180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G001180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger CCCH domain-containing protein 20-like
Genome locationCmo_Chr05:495566..496486
RNA-Seq ExpressionCmoCh05G001180
SyntenyCmoCh05G001180
Gene Ontology termsGO:0061157 - mRNA destabilization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598310.1 Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. sororia]8.0e-17698.37Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MINESMFLNPTPHISSWDSLDDPAAAIPSYFTA NVSPLDSPTAAVMDYDS LWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKF YSGTECPDLRHGCCMKGDAC+YAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
        SSSSDSPPMSPISPLTTGGESFSRLVA+MHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI

Query:  LAGSRN
        LAGSRN
Subjt:  LAGSRN

KAG7029281.1 Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-17698.69Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MINESMFLNPTPHISSWDSLDDPAAAIPSYFTA NVSPLDSPTAAVMDYDS LWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKF YSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
        SSSSDSPPMSPISPLTTGGESFSRLVA+MHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI

Query:  LAGSRN
        LAGSRN
Subjt:  LAGSRN

XP_022961630.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata]1.0e-178100Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
        SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI

Query:  LAGSRN
        LAGSRN
Subjt:  LAGSRN

XP_022997351.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima]8.3e-17396.73Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MINESMFLNPTPHISSWDSLDDPAAAIPSYFTA NVSPLDSPTAAVMDYDS  WEDQDLPA+VDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGA CRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAA AVSSPTSILI
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
        SSSSDSPPMSPISPL TGGESFSRLVA+MHNLHFDELKTNPGISGFGP+FRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMR+NSVERVRPLI
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI

Query:  LAGSRN
        LAGSRN
Subjt:  LAGSRN

XP_023545606.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo]8.9e-17598.04Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MINESMFLN TPHISSWDSLDDPAAAIPSYFTA NVSPLDSPTAAVMDYDS LWEDQDLPA+VDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREI ASAVSSPTSILI
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
        SSSSDSPPMSPISPLTTGGESFSRLVA+MHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI

Query:  LAGSRN
        LAGSRN
Subjt:  LAGSRN

TrEMBL top hitse value%identityAlignment
A0A0A0LNN8 Uncharacterized protein9.0e-14982.74Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MI ESM LNPT HIS+WDSLDDP+ AI SYF+  +VSPLDSPTAA+MD+DS LWED DLPA VDA++CD FRMYEFKVR+CARGRSHDWTKCPYAH GEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKFNYSG ECPDLRHGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+RSPR RE+A  AVSSPTSIL+
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSG-AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPL
        S SSDSPP+SPISP+ +GGESFSRLVA+MH+L  DELKTNPG+S F PN RR+SG AFD WDR+NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRP+
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSG-AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPL

Query:  ILAGSRN
        I AGS N
Subjt:  ILAGSRN

A0A1S3BBA7 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 202.5e-15183.99Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MI ESM LNPT HIS+WDSLDDP+AAI SYF+A +VSPLDSPTAA+MD+DS LWED DLPA VD F+CD FRMYEFKVR+CARGRSHDWTKCPYAH GEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKFNYSG ECPDLRHGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+RSPR REIA  AVSSPTSIL+
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
        S SSDSPP+SPISP+ +GGES SRLVA+MH+L  DE KTNPG+S F PN RRNSGAFD WDR+NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRPLI
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI

Query:  LAGSRN
         AGS+N
Subjt:  LAGSRN

A0A5A7V5C0 Zinc finger CCCH domain-containing protein 207.9e-15384.64Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MI ESM LNPT HIS+WDSLDDP+AAI SYF+A +VSPLDSPTAA+MD+DS LWED DLPA VD F+CD FRMYEFKVR+CARGRSHDWTKCPYAH GEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKFNYSG ECPDLRHGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+RSPR REIA  AVSSPTSIL+
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
        S SSDSPP+SPISP+ +GGESFSRLVA+MH+L  DELKTNPG+S F PN RRNSGAFD WDR+NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRPLI
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI

Query:  LAGSRN
         AGS+N
Subjt:  LAGSRN

A0A6J1HCT8 zinc finger CCCH domain-containing protein 20-like4.9e-179100Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
        SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI

Query:  LAGSRN
        LAGSRN
Subjt:  LAGSRN

A0A6J1K790 zinc finger CCCH domain-containing protein 20-like4.0e-17396.73Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
        MINESMFLNPTPHISSWDSLDDPAAAIPSYFTA NVSPLDSPTAAVMDYDS  WEDQDLPA+VDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI
        ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGA CRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAA AVSSPTSILI
Subjt:  ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILI

Query:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI
        SSSSDSPPMSPISPL TGGESFSRLVA+MHNLHFDELKTNPGISGFGP+FRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMR+NSVERVRPLI
Subjt:  SSSSDSPPMSPISPLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI

Query:  LAGSRN
        LAGSRN
Subjt:  LAGSRN

SwissProt top hitse value%identityAlignment
O82199 Zinc finger CCCH domain-containing protein 203.5e-7346.36Show/hide
Query:  MINES-MFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDY--------DSLLWEDQDL---PAMVDAFTCDHFRMYEFKVRACARGRSHD
        MI ES    NPT HI  W  L +       Y + D  S +    A +  Y        DS    D DL    + +DA+TCDHFRMYEFKVR CARGRSHD
Subjt:  MINES-MFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDY--------DSLLWEDQDL---PAMVDAFTCDHFRMYEFKVRACARGRSHD

Query:  WTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIA
        WT+CPYAH GEKARRRDPRKF+YSGT CP+ R GCC +GDACE++HGVFE WLHP RYRTQPC+DG  CRRRVCFFAHS +Q+R+   QS       ++ 
Subjt:  WTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIA

Query:  ASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSR---------LVAMMHNLHFDELKT------NPGISGF------------GPNFR------RNSG
        +  +       IS SS+SPP+SP     +     SR         +VA + NL  +++K+      N  I G+            GP FR         G
Subjt:  ASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSR---------LVAMMHNLHFDELKT------NPGISGF------------GPNFR------RNSG

Query:  AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRP
          + W+   EEEPAMERVESGR LRAQ++ KL +EN + R+ P
Subjt:  AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRP

O82307 Zinc finger CCCH domain-containing protein 233.7e-6746.37Show/hide
Query:  NPTPHISSWDSLDDPAAAIPSYFTADNVSPLD----SPTAAVMDYDSL--------LWEDQDLPA------MVDAFTCDHFRMYEFKVRACARGRSHDWT
        +PT HI  WD ++DP A I S F++ N++ ++    SP+  +  + SL        L  D D  +      + D+F+ D FR+YEFK+R CARGRSHDWT
Subjt:  NPTPHISSWDSLDDPAAAIPSYFTADNVSPLD----SPTAAVMDYDSL--------LWEDQDLPA------MVDAFTCDHFRMYEFKVRACARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAAS
        +CP+AH GEKARRRDPRKF+YSGT CP+ R G C +GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAH++EQLR+    S+    G    + 
Subjt:  KCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAAS

Query:  AVSSPTSILISSS----SDSPPMSPIS----------PLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESG
          +SPTSIL+S S    S+SPP+SP +           L  GG S+S  +     L F      P  +   P  R         + + EE PAME VESG
Subjt:  AVSSPTSILISSS----SDSPPMSPIS----------PLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESG

Query:  RNLRAQMYAKLMRENSV
        + LRA+MYA+L RENS+
Subjt:  RNLRAQMYAKLMRENSV

Q6L4N4 Zinc finger CCCH domain-containing protein 352.1e-5441.93Show/hide
Query:  AMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRR
        A VDA+ CD FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPR++ YSGT CPD R G C +GDACE+AHGVFE WLHP RYRTQPC+DG  CRRR
Subjt:  AMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRR

Query:  VCFFAHSSEQLRI---PGKQSIRSPR-----GREIAASAV------------------------SSPTSILI----SSSSDSPPMSP--ISPLTTG----
        VCFFAH+ +QLR+     +Q   SPR     G   AAS +                        SSPTS L+    S  S+SPP+SP     L  G    
Subjt:  VCFFAHSSEQLRI---PGKQSIRSPR-----GREIAASAV------------------------SSPTSILI----SSSSDSPPMSP--ISPLTTG----

Query:  -GESFSRLVAMMHNLHFDELKTNPGISGFGP--------------------------------NFRRNSGAFDSWDRDN----EEEPAMERVESGRNLRA
         G   + +   +  L     ++ P  + F P                                     SGA  + +  +    EEE  MERVESGR LR 
Subjt:  -GESFSRLVAMMHNLHFDELKTNPGISGFGP--------------------------------NFRRNSGAFDSWDRDN----EEEPAMERVESGRNLRA

Query:  QMYAKLMRENSVERVRPLILAG
        +++ +L +E +V        AG
Subjt:  QMYAKLMRENSVERVRPLILAG

Q9FU27 Zinc finger CCCH domain-containing protein 23.0e-5643.71Show/hide
Query:  LPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCR
        + A VDA+ CD FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPRK++YSGT CPD R G C +GDACEYAHGVFE WLHP RYRTQPC+DG  CR
Subjt:  LPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCR

Query:  RRVCFFAHSSEQLRI-PGKQSI--------------RSPRGREIAASAV------SSPTSILI----SSSSDSPPMSP--ISPLTTG-----GESFSRLV
        RRVCFFAH+ +QLR+ P +QS                SP  R+   S +      SSPTS L+    S  S+SPP+SP   + +  G     G   + ++
Subjt:  RRVCFFAHSSEQLRI-PGKQSI--------------RSPRGREIAASAV------SSPTSILI----SSSSDSPPMSP--ISPLTTG-----GESFSRLV

Query:  AMMHNLHFDELKTNPGISGFGPNFRRNSGAFDS-----------------------------------WDRDNEEEPAMERVESGRNLRAQMYAKLMREN
        A    L  +++K++P  SG G ++  +S  + S                                        +EEP ++RVESGR LR +++ +L R+ 
Subjt:  AMMHNLHFDELKTNPGISGFGPNFRRNSGAFDS-----------------------------------WDRDNEEEPAMERVESGRNLRAQMYAKLMREN

Query:  SV
        ++
Subjt:  SV

Q9M0G2 Zinc finger CCCH domain-containing protein 493.2e-6643.6Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSP-LDSPTAAVMD------------------YDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRAC
        MI E+    PT  I  W  L++         T++  SP ++SP  ++++                  Y  LL  D    + +DA++CDHFRMY+FKVR C
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSP-LDSPTAAVMD------------------YDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRAC

Query:  ARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRS
        ARGRSHDWT+CPYAH GEKARRRDPRK++YSGT CPD R G C KGD+CE+AHGVFE WLHP RYRTQPC+DG  C R++CFFAHS +QLR    +S   
Subjt:  ARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRS

Query:  PRGREIAASAVSSPTSILISSSSDSPPMSP-----ISPLT------TGGESFSRLVAMMHNLHFDELKT---NPGISGFG--------------PNFRRN
            ++++   +    + IS  S SPPMSP      SP+T       G  S + +V    NL F+ +K+   N  + GFG              P     
Subjt:  PRGREIAASAVSSPTSILISSSSDSPPMSP-----ISPLT------TGGESFSRLVAMMHNLHFDELKT---NPGISGFG--------------PNFRRN

Query:  SGAFDSWDRDNEEEPAMER-VESGRNLRAQMYAKLMRENSVERV
         G  D W+   EEEP MER VESGR LR +M  KL +EN ++RV
Subjt:  SGAFDSWDRDNEEEPAMER-VESGRNLRAQMYAKLMRENSVERV

Arabidopsis top hitse value%identityAlignment
AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein5.8e-4753.67Show/hide
Query:  DAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRH-GCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVC
        D +  DHFRM+EFK+R C R RSHDWT CP+AH GEKARRRDPR+F YSG  CP+ R  G C +GD CE+AHGVFE WLHP RYRT+ C+DG  C+R+VC
Subjt:  DAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRH-GCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVC

Query:  FFAHSSEQLR------IPGKQSIRSPRGRE-IAASAVSSPTSILIS-------SSSDSPPMSPISPLTTGGESFSRL
        FFAHS  QLR      + G  +  SP  +        SSPTS L+        S S SPPMSP +       +FSRL
Subjt:  FFAHSSEQLR------IPGKQSIRSPRGRE-IAASAVSSPTSILIS-------SSSDSPPMSPISPLTTGGESFSRL

AT2G19810.1 CCCH-type zinc finger family protein2.5e-7446.36Show/hide
Query:  MINES-MFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDY--------DSLLWEDQDL---PAMVDAFTCDHFRMYEFKVRACARGRSHD
        MI ES    NPT HI  W  L +       Y + D  S +    A +  Y        DS    D DL    + +DA+TCDHFRMYEFKVR CARGRSHD
Subjt:  MINES-MFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDY--------DSLLWEDQDL---PAMVDAFTCDHFRMYEFKVRACARGRSHD

Query:  WTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIA
        WT+CPYAH GEKARRRDPRKF+YSGT CP+ R GCC +GDACE++HGVFE WLHP RYRTQPC+DG  CRRRVCFFAHS +Q+R+   QS       ++ 
Subjt:  WTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIA

Query:  ASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSR---------LVAMMHNLHFDELKT------NPGISGF------------GPNFR------RNSG
        +  +       IS SS+SPP+SP     +     SR         +VA + NL  +++K+      N  I G+            GP FR         G
Subjt:  ASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSR---------LVAMMHNLHFDELKT------NPGISGF------------GPNFR------RNSG

Query:  AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRP
          + W+   EEEPAMERVESGR LRAQ++ KL +EN + R+ P
Subjt:  AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRP

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.7e-6846.37Show/hide
Query:  NPTPHISSWDSLDDPAAAIPSYFTADNVSPLD----SPTAAVMDYDSL--------LWEDQDLPA------MVDAFTCDHFRMYEFKVRACARGRSHDWT
        +PT HI  WD ++DP A I S F++ N++ ++    SP+  +  + SL        L  D D  +      + D+F+ D FR+YEFK+R CARGRSHDWT
Subjt:  NPTPHISSWDSLDDPAAAIPSYFTADNVSPLD----SPTAAVMDYDSL--------LWEDQDLPA------MVDAFTCDHFRMYEFKVRACARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAAS
        +CP+AH GEKARRRDPRKF+YSGT CP+ R G C +GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAH++EQLR+    S+    G    + 
Subjt:  KCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAAS

Query:  AVSSPTSILISSS----SDSPPMSPIS----------PLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESG
          +SPTSIL+S S    S+SPP+SP +           L  GG S+S  +     L F      P  +   P  R         + + EE PAME VESG
Subjt:  AVSSPTSILISSS----SDSPPMSPIS----------PLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESG

Query:  RNLRAQMYAKLMRENSV
        + LRA+MYA+L RENS+
Subjt:  RNLRAQMYAKLMRENSV

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein2.7e-6846.37Show/hide
Query:  NPTPHISSWDSLDDPAAAIPSYFTADNVSPLD----SPTAAVMDYDSL--------LWEDQDLPA------MVDAFTCDHFRMYEFKVRACARGRSHDWT
        +PT HI  WD ++DP A I S F++ N++ ++    SP+  +  + SL        L  D D  +      + D+F+ D FR+YEFK+R CARGRSHDWT
Subjt:  NPTPHISSWDSLDDPAAAIPSYFTADNVSPLD----SPTAAVMDYDSL--------LWEDQDLPA------MVDAFTCDHFRMYEFKVRACARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAAS
        +CP+AH GEKARRRDPRKF+YSGT CP+ R G C +GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAH++EQLR+    S+    G    + 
Subjt:  KCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAAS

Query:  AVSSPTSILISSS----SDSPPMSPIS----------PLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESG
          +SPTSIL+S S    S+SPP+SP +           L  GG S+S  +     L F      P  +   P  R         + + EE PAME VESG
Subjt:  AVSSPTSILISSS----SDSPPMSPIS----------PLTTGGESFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESG

Query:  RNLRAQMYAKLMRENSV
        + LRA+MYA+L RENS+
Subjt:  RNLRAQMYAKLMRENSV

AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.2e-6743.6Show/hide
Query:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSP-LDSPTAAVMD------------------YDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRAC
        MI E+    PT  I  W  L++         T++  SP ++SP  ++++                  Y  LL  D    + +DA++CDHFRMY+FKVR C
Subjt:  MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSP-LDSPTAAVMD------------------YDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRAC

Query:  ARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRS
        ARGRSHDWT+CPYAH GEKARRRDPRK++YSGT CPD R G C KGD+CE+AHGVFE WLHP RYRTQPC+DG  C R++CFFAHS +QLR    +S   
Subjt:  ARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRS

Query:  PRGREIAASAVSSPTSILISSSSDSPPMSP-----ISPLT------TGGESFSRLVAMMHNLHFDELKT---NPGISGFG--------------PNFRRN
            ++++   +    + IS  S SPPMSP      SP+T       G  S + +V    NL F+ +K+   N  + GFG              P     
Subjt:  PRGREIAASAVSSPTSILISSSSDSPPMSP-----ISPLT------TGGESFSRLVAMMHNLHFDELKT---NPGISGFG--------------PNFRRN

Query:  SGAFDSWDRDNEEEPAMER-VESGRNLRAQMYAKLMRENSVERV
         G  D W+   EEEP MER VESGR LR +M  KL +EN ++RV
Subjt:  SGAFDSWDRDNEEEPAMER-VESGRNLRAQMYAKLMRENSVERV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAACGAATCAATGTTTCTCAATCCCACGCCTCACATTTCATCCTGGGACTCCCTCGACGATCCCGCCGCCGCAATCCCATCATATTTCACCGCGGACAACGTGTC
GCCGCTCGATTCGCCGACGGCGGCGGTTATGGACTACGATTCGTTGCTCTGGGAGGATCAAGACTTGCCGGCCATGGTGGACGCCTTCACGTGCGACCATTTCCGGATGT
ACGAGTTCAAAGTCCGCGCGTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCCTACGCCCACGCCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAAC
TATTCCGGCACCGAGTGTCCGGATTTACGTCATGGGTGTTGTATGAAAGGAGACGCTTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCTGATCGGTACCG
GACTCAGCCATGCCGTGACGGAGCAGGCTGCCGAAGGCGGGTCTGTTTCTTCGCCCACTCGTCGGAGCAACTCCGGATTCCAGGGAAACAGAGCATCAGGTCTCCCCGAG
GCAGGGAAATCGCCGCCTCTGCCGTATCATCTCCGACGTCCATCCTAATATCATCATCGTCGGACTCGCCGCCTATGTCTCCGATCAGCCCTTTAACCACCGGTGGGGAA
TCGTTCAGTAGATTAGTCGCAATGATGCACAATCTCCACTTTGATGAATTAAAAACGAATCCGGGGATCTCCGGCTTCGGTCCAAATTTCCGACGAAACTCCGGCGCATT
TGATTCATGGGACAGAGATAACGAAGAAGAACCAGCAATGGAGAGAGTAGAATCAGGGAGAAACCTACGAGCCCAAATGTACGCGAAATTGATGAGAGAGAACTCAGTGG
AGCGTGTCCGGCCGCTGATATTGGCCGGATCTCGGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTAACGAATCAATGTTTCTCAATCCCACGCCTCACATTTCATCCTGGGACTCCCTCGACGATCCCGCCGCCGCAATCCCATCATATTTCACCGCGGACAACGTGTC
GCCGCTCGATTCGCCGACGGCGGCGGTTATGGACTACGATTCGTTGCTCTGGGAGGATCAAGACTTGCCGGCCATGGTGGACGCCTTCACGTGCGACCATTTCCGGATGT
ACGAGTTCAAAGTCCGCGCGTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCCTACGCCCACGCCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAAC
TATTCCGGCACCGAGTGTCCGGATTTACGTCATGGGTGTTGTATGAAAGGAGACGCTTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCTGATCGGTACCG
GACTCAGCCATGCCGTGACGGAGCAGGCTGCCGAAGGCGGGTCTGTTTCTTCGCCCACTCGTCGGAGCAACTCCGGATTCCAGGGAAACAGAGCATCAGGTCTCCCCGAG
GCAGGGAAATCGCCGCCTCTGCCGTATCATCTCCGACGTCCATCCTAATATCATCATCGTCGGACTCGCCGCCTATGTCTCCGATCAGCCCTTTAACCACCGGTGGGGAA
TCGTTCAGTAGATTAGTCGCAATGATGCACAATCTCCACTTTGATGAATTAAAAACGAATCCGGGGATCTCCGGCTTCGGTCCAAATTTCCGACGAAACTCCGGCGCATT
TGATTCATGGGACAGAGATAACGAAGAAGAACCAGCAATGGAGAGAGTAGAATCAGGGAGAAACCTACGAGCCCAAATGTACGCGAAATTGATGAGAGAGAACTCAGTGG
AGCGTGTCCGGCCGCTGATATTGGCCGGATCTCGGAACTAA
Protein sequenceShow/hide protein sequence
MINESMFLNPTPHISSWDSLDDPAAAIPSYFTADNVSPLDSPTAAVMDYDSLLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFN
YSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILISSSSDSPPMSPISPLTTGGE
SFSRLVAMMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLILAGSRN