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CmoCh05G001330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G001330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPhytosulfokine-beta
Genome locationCmo_Chr05:583382..583766
RNA-Seq ExpressionCmoCh05G001330
SyntenyCmoCh05G001330
Gene Ontology termsGO:0008283 - cell population proliferation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585714.1 Phytosulfokine, partial [Cucurbita argyrosperma subsp. sororia]3.4e-0856.1Show/hide
Query:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSA---VIANPVIVS---EEVCK----DDCLIRRTLEAHTDYIYSGDTK
        MSKL ALF++ ALV+MSL L SSEARPI T TATS     IA+ V+     ++VC+     +CL +RT+EAHTDYIY+ DTK
Subjt:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSA---VIANPVIVS---EEVCK----DDCLIRRTLEAHTDYIYSGDTK
KAG6598323.1 Phytosulfokine, partial [Cucurbita argyrosperma subsp. sororia]6.0e-29100Show/hide
Query:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVIVSEEVCKDDCLIRRTLEAHTDYIYSGDTKP
        MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVIVSEEVCKDDCLIRRTLEAHTDYIYSGDTKP
Subjt:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVIVSEEVCKDDCLIRRTLEAHTDYIYSGDTKP
XP_022131649.1 uncharacterized protein LOC111004777 [Momordica charantia]1.3e-1062.2Show/hide
Query:  MSK-LAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVI---VSEEVCKD-----DCLIRRTLEAHTDYIYSGDTKP
        MSK LAALF IAAL++MS++L SS+ARPITT +A S  IA+P     V E+ C +     DCL RRTLEAHTDYIYSG+TKP
Subjt:  MSK-LAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVI---VSEEVCKD-----DCLIRRTLEAHTDYIYSGDTKP
XP_022132249.1 phytosulfokines-like [Momordica charantia]2.2e-0755.56Show/hide
Query:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPV---IVSEEVC-----KDDCLIRRTLEAHTDYIYSGDTKP
        M+KLAALFTI ALV    +L SSEARP     ATS  I NPV    V+ ++C      +DCL RRTL AHTDYIY+ +TKP
Subjt:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPV---IVSEEVC-----KDDCLIRRTLEAHTDYIYSGDTKP
XP_023546620.1 phytosulfokines-like [Cucurbita pepo subsp. pepo]1.1e-1776.83Show/hide
Query:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVIVSEEV-----C----KDDCLIRRTLEAHTDYIYSGDTKP
        MSKLAALFTIAAL++M     SSEARPI TLTATSAVIANPV V+EEV     C    KDDCLIRRTLEAHTDYIYSGDTKP
Subjt:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVIVSEEV-----C----KDDCLIRRTLEAHTDYIYSGDTKP
TrEMBL top hitse value%identityAlignment
A0A5A7V550 Phytosulfokine-beta9.4e-0448.24Show/hide
Query:  KLAALFT-IAALVSMS--LMLPSSE-ARPITTLTATSAVIANPVIVS---------EEVCKDDCLIRRTLEAHTDYIYSGD-TKP
        KLAALFT IAALV++   +++PSSE ARPI +L      I +  +V+         E + K+DCLI+RTL+AH DY+Y+ D TKP
Subjt:  KLAALFT-IAALVSMS--LMLPSSE-ARPITTLTATSAVIANPVIVS---------EEVCKDDCLIRRTLEAHTDYIYSGD-TKP
A0A6J1BQV2 Phytosulfokine-beta6.1e-1162.2Show/hide
Query:  MSK-LAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVI---VSEEVCKD-----DCLIRRTLEAHTDYIYSGDTKP
        MSK LAALF IAAL++MS++L SS+ARPITT +A S  IA+P     V E+ C +     DCL RRTLEAHTDYIYSG+TKP
Subjt:  MSK-LAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVI---VSEEVCKD-----DCLIRRTLEAHTDYIYSGDTKP
A0A6J1BSJ0 Phytosulfokine-beta1.1e-0755.56Show/hide
Query:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPV---IVSEEVC-----KDDCLIRRTLEAHTDYIYSGDTKP
        M+KLAALFTI ALV    +L SSEARP     ATS  I NPV    V+ ++C      +DCL RRTL AHTDYIY+ +TKP
Subjt:  MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPV---IVSEEVC-----KDDCLIRRTLEAHTDYIYSGDTKP
SwissProt top hitse value%identityAlignment
Q9FS10 Phytosulfokines2.2e-0542.11Show/hide
Query:  SKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVIVSEEVC----KDDCLIRRTLEAHTDYIYSGDTKP
        SK   L  IA L S+SL   +  ARP+    +T +V   P  V +E C    +++CL+RRTL AH DYIY+ D  P
Subjt:  SKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVIVSEEVC----KDDCLIRRTLEAHTDYIYSGDTKP
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGCTCGCGGCTCTCTTCACCATTGCAGCACTCGTTTCAATGTCCCTCATGCTGCCGTCCTCCGAGGCTCGTCCCATCACTACTCTCACTGCCACTTCTGCCGT
AATCGCCAATCCGGTGATCGTTTCTGAAGAGGTTTGTAAAGACGACTGCCTGATCAGAAGAACCTTAGAGGCTCATACTGATTACATCTATTCCGGCGACACTAAGCCAT
GA
mRNA sequenceShow/hide mRNA sequence
CCTCCAGTCGTCTCCATTGTAACCACGAAAATGTCGAAGCTCGCGGCTCTCTTCACCATTGCAGCACTCGTTTCAATGTCCCTCATGCTGCCGTCCTCCGAGGCTCGTCC
CATCACTACTCTCACTGCCACTTCTGCCGTAATCGCCAATCCGGTGATCGTTTCTGAAGAGGTTTGTAAAGACGACTGCCTGATCAGAAGAACCTTAGAGGCTCATACTG
ATTACATCTATTCCGGCGACACTAAGCCATGAATTACTTATCTTTTTATATTTTCTCTCATTAATACAGTCTA
Protein sequenceShow/hide protein sequence
MSKLAALFTIAALVSMSLMLPSSEARPITTLTATSAVIANPVIVSEEVCKDDCLIRRTLEAHTDYIYSGDTKP