; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G001370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G001370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr05:597682..599676
RNA-Seq ExpressionCmoCh05G001370
SyntenyCmoCh05G001370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT79752.1 hypothetical protein VIGAN_02267900, partial [Vigna angularis var. angularis]1.6e-1650.89Show/hide
Query:  SQNTLLDACTSSFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFS
        S  TLL+A   SFS+S  RV +S P SP    +   LS S ++N S SL SF GSF+L A PSP RK T  ILS I  KHSG   PSM  P+T+ QS FS
Subjt:  SQNTLLDACTSSFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFS

Query:  ETNTLVAATLKC
        E  T +  T KC
Subjt:  ETNTLVAATLKC

PON72967.1 hypothetical protein PanWU01x14_061170 [Parasponia andersonii]3.9e-3168.6Show/hide
Query:  SFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLK
        SF SSL R ++S P SP   SENS LS S E NMSKSL SF GS +LL TPSPNRK TAMILSAIFTKHSGH SPS+  P+TWLQSFFS+T+T+  A+ K
Subjt:  SFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLK

Query:  CSIHREIAVSNFSHSILSISS
        C IHR IAVS  SH I SISS
Subjt:  CSIHREIAVSNFSHSILSISS

PON91135.1 hypothetical protein TorRG33x02_131660 [Trema orientale]1.3e-3169.42Show/hide
Query:  SFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLK
        SF SSL R ++S P SP   SENS LS S E NMSKSL SF GS +LL TPSPNRK TAMILSAIFTKHSG  SPSM  P+TWLQSFFS+T+T+  A+ K
Subjt:  SFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLK

Query:  CSIHREIAVSNFSHSILSISS
        C IHR IAVS  SHSI SISS
Subjt:  CSIHREIAVSNFSHSILSISS

XP_020244538.1 uncharacterized protein LOC109822714 isoform X1 [Asparagus officinalis]5.7e-2240.17Show/hide
Query:  MEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLKCSIHREIAVSNFSHSILSISSGVLSKASS
        ME+ MS+SL SF GS  L ATPSP RKKTAMILSAIF KH+G I PSMM  +T LQ  FS   T   A+ KC I R IA S  SHSILSISS        
Subjt:  MEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLKCSIHREIAVSNFSHSILSISSGVLSKASS

Query:  SNPSNFMSSISVSYRALRVIIVSFSLRSCADFSTDKLAKIARILRWRNSDRLKESSRTRAGEAARLILVSRAFVVIANDCRGIMLLDAVASDSSIESRFF
                                              +  R  RWR+S   K S   RAGE ARL+    AF  I   CRG    DA A+ S  + R  
Subjt:  SNPSNFMSSISVSYRALRVIIVSFSLRSCADFSTDKLAKIARILRWRNSDRLKESSRTRAGEAARLILVSRAFVVIANDCRGIMLLDAVASDSSIESRFF

Query:  SIFSRLSFNPVEAWRRIFKSEHADSSFSILESSS
        S  +R  F+  ++ R   + + A  SF+ + SSS
Subjt:  SIFSRLSFNPVEAWRRIFKSEHADSSFSILESSS

XP_020244546.1 uncharacterized protein LOC109822714 isoform X2 [Asparagus officinalis]1.0e-1548.84Show/hide
Query:  MEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLKCSIHREIAVSNFSHSILSISSGVLSKASS
        ME+ MS+SL SF GS  L ATPSP RKKTAMILSAIF KH+G I PSMM  +T LQ  FS   T   A+ KC I R IA S  SHSILSISS + +   S
Subjt:  MEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLKCSIHREIAVSNFSHSILSISSGVLSKASS

Query:  SNPSNFMSSISVSYRALRVIIVSFSLRSC
                  +  +R  +++++ F++  C
Subjt:  SNPSNFMSSISVSYRALRVIIVSFSLRSC

TrEMBL top hitse value%identityAlignment
A0A0S3RGG8 Uncharacterized protein (Fragment)7.7e-1750.89Show/hide
Query:  SQNTLLDACTSSFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFS
        S  TLL+A   SFS+S  RV +S P SP    +   LS S ++N S SL SF GSF+L A PSP RK T  ILS I  KHSG   PSM  P+T+ QS FS
Subjt:  SQNTLLDACTSSFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFS

Query:  ETNTLVAATLKC
        E  T +  T KC
Subjt:  ETNTLVAATLKC

A0A2P5DI24 Uncharacterized protein1.9e-3168.6Show/hide
Query:  SFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLK
        SF SSL R ++S P SP   SENS LS S E NMSKSL SF GS +LL TPSPNRK TAMILSAIFTKHSGH SPS+  P+TWLQSFFS+T+T+  A+ K
Subjt:  SFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLK

Query:  CSIHREIAVSNFSHSILSISS
        C IHR IAVS  SH I SISS
Subjt:  CSIHREIAVSNFSHSILSISS

A0A2P5F043 Uncharacterized protein6.5e-3269.42Show/hide
Query:  SFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLK
        SF SSL R ++S P SP   SENS LS S E NMSKSL SF GS +LL TPSPNRK TAMILSAIFTKHSG  SPSM  P+TWLQSFFS+T+T+  A+ K
Subjt:  SFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLK

Query:  CSIHREIAVSNFSHSILSISS
        C IHR IAVS  SHSI SISS
Subjt:  CSIHREIAVSNFSHSILSISS

A0A5P1FPR5 Uncharacterized protein2.7e-2240.17Show/hide
Query:  MEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLKCSIHREIAVSNFSHSILSISSGVLSKASS
        ME+ MS+SL SF GS  L ATPSP RKKTAMILSAIF KH+G I PSMM  +T LQ  FS   T   A+ KC I R IA S  SHSILSISS        
Subjt:  MEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLKCSIHREIAVSNFSHSILSISSGVLSKASS

Query:  SNPSNFMSSISVSYRALRVIIVSFSLRSCADFSTDKLAKIARILRWRNSDRLKESSRTRAGEAARLILVSRAFVVIANDCRGIMLLDAVASDSSIESRFF
                                              +  R  RWR+S   K S   RAGE ARL+    AF  I   CRG    DA A+ S  + R  
Subjt:  SNPSNFMSSISVSYRALRVIIVSFSLRSCADFSTDKLAKIARILRWRNSDRLKESSRTRAGEAARLILVSRAFVVIANDCRGIMLLDAVASDSSIESRFF

Query:  SIFSRLSFNPVEAWRRIFKSEHADSSFSILESSS
        S  +R  F+  ++ R   + + A  SF+ + SSS
Subjt:  SIFSRLSFNPVEAWRRIFKSEHADSSFSILESSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATACGCGGTTCTGTGTTTATGTGAGAATTCCCTTAGAGCCTTCACGAATGCTTCCATTTTTGTTTTCGCTAATTCTTCCACGGTTTCCTTGTTCGGTAATCGCAC
GTCTTCCATGTCCATTACTGAAAGCAAGGGCTCCCAACATAGCATTTGGGCTTCCATTACGTTAGAGAAGGCGTCTTTGAGGAGATTATCCTCGTCTTCCGATTTCAAAA
CGACTCCGCCCTTCCATGATTTCTGTATTTGGAGAACTTTGGTCATGGCGAAACTGCCGAAGTCCCAAAATACTTTGCTGGACGCGTGTACAAGTAGCTTCTCCAGCTCT
CTGTATCGTGTGCGAATTTCTGTGCCAGCTTCGCCGCCGAATGCCTCAGAGAATTCGGAGTTGAGTTCTTCCATGGAGGCGAACATGTCCAAGAGCTTGAACAGTTTCTG
CGGCTCTTTTGTGCTTCTGGCGACGCCTTCCCCAAATCGGAAGAAGACGGCCATGATTTTGTCCGCGATCTTCACGAAGCATTCAGGCCACATCAGTCCATCCATGATGG
AGCCTAAAACTTGGCTACAGAGTTTCTTCTCGGAAACCAACACGCTCGTGGCTGCGACCTTGAAGTGTTCAATCCACAGAGAAATTGCTGTCTCCAACTTTTCCCACTCC
ATTTTGTCAATTTCTTCTGGAGTATTAAGCAAAGCTTCGTCAAGCAACCCCTCAAACTTCATGTCGTCAATTTCTGTTTCGTATAGAGCTTTGAGAGTGATCATCGTCTC
TTTCAGTCTACGTTCCTGTGCCGATTTTTCCACCGATAAATTGGCGAAGATCGCGAGAATCTTGCGTTGGAGAAACTCGGATCGCTTAAAGGAATCAAGCAGAACGAGAG
CAGGCGAAGCTGCACGATTGATTCTCGTTTCAAGGGCTTTTGTCGTCATCGCCAATGATTGTAGAGGTATTATGCTTCTCGATGCTGTCGCGAGCGATTCGTCGATTGAA
TCAAGATTCTTCTCCATCTTCTCTAGGCTATCGTTCAATCCCGTCGAGGCTTGGAGGAGGATTTTCAAATCCGAGCATGCTGATTCGAGCTTCTCCATCCTCGAGTCCTC
CTCCTCCCTCGGCGCCATTGTTACTACTCCTTGA
mRNA sequenceShow/hide mRNA sequence
GTAAGCCGGCAGTATCATCTTCAGAGTTGCCTCTTTCAACTGCTCCCGCAAATCCAAATCTGGAATGCAATACGCGGTTCTGTGTTTATGTGAGAATTCCCTTAGAGCCT
TCACGAATGCTTCCATTTTTGTTTTCGCTAATTCTTCCACGGTTTCCTTGTTCGGTAATCGCACGTCTTCCATGTCCATTACTGAAAGCAAGGGCTCCCAACATAGCATT
TGGGCTTCCATTACGTTAGAGAAGGCGTCTTTGAGGAGATTATCCTCGTCTTCCGATTTCAAAACGACTCCGCCCTTCCATGATTTCTGTATTTGGAGAACTTTGGTCAT
GGCGAAACTGCCGAAGTCCCAAAATACTTTGCTGGACGCGTGTACAAGTAGCTTCTCCAGCTCTCTGTATCGTGTGCGAATTTCTGTGCCAGCTTCGCCGCCGAATGCCT
CAGAGAATTCGGAGTTGAGTTCTTCCATGGAGGCGAACATGTCCAAGAGCTTGAACAGTTTCTGCGGCTCTTTTGTGCTTCTGGCGACGCCTTCCCCAAATCGGAAGAAG
ACGGCCATGATTTTGTCCGCGATCTTCACGAAGCATTCAGGCCACATCAGTCCATCCATGATGGAGCCTAAAACTTGGCTACAGAGTTTCTTCTCGGAAACCAACACGCT
CGTGGCTGCGACCTTGAAGTGTTCAATCCACAGAGAAATTGCTGTCTCCAACTTTTCCCACTCCATTTTGTCAATTTCTTCTGGAGTATTAAGCAAAGCTTCGTCAAGCA
ACCCCTCAAACTTCATGTCGTCAATTTCTGTTTCGTATAGAGCTTTGAGAGTGATCATCGTCTCTTTCAGTCTACGTTCCTGTGCCGATTTTTCCACCGATAAATTGGCG
AAGATCGCGAGAATCTTGCGTTGGAGAAACTCGGATCGCTTAAAGGAATCAAGCAGAACGAGAGCAGGCGAAGCTGCACGATTGATTCTCGTTTCAAGGGCTTTTGTCGT
CATCGCCAATGATTGTAGAGGTATTATGCTTCTCGATGCTGTCGCGAGCGATTCGTCGATTGAATCAAGATTCTTCTCCATCTTCTCTAGGCTATCGTTCAATCCCGTCG
AGGCTTGGAGGAGGATTTTCAAATCCGAGCATGCTGATTCGAGCTTCTCCATCCTCGAGTCCTCCTCCTCCCTCGGCGCCATTGTTACTACTCCTTGA
Protein sequenceShow/hide protein sequence
MQYAVLCLCENSLRAFTNASIFVFANSSTVSLFGNRTSSMSITESKGSQHSIWASITLEKASLRRLSSSSDFKTTPPFHDFCIWRTLVMAKLPKSQNTLLDACTSSFSSS
LYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLKCSIHREIAVSNFSHS
ILSISSGVLSKASSSNPSNFMSSISVSYRALRVIIVSFSLRSCADFSTDKLAKIARILRWRNSDRLKESSRTRAGEAARLILVSRAFVVIANDCRGIMLLDAVASDSSIE
SRFFSIFSRLSFNPVEAWRRIFKSEHADSSFSILESSSSLGAIVTTP