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CmoCh05G001390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G001390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSmall VCP/p97-interacting protein
Genome locationCmo_Chr05:607476..609127
RNA-Seq ExpressionCmoCh05G001390
SyntenyCmoCh05G001390
Gene Ontology termsNA
InterPro domainsIPR031632 - Small VCP/p97-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652065.1 hypothetical protein Csa_018778 [Cucumis sativus]2.6e-2288Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKVI
        MGQC SCLD GQ+Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSA  NKGEPVLK +
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKVI
KAG7029301.1 hypothetical protein SDJN02_07639, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-4967.54Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKVIILSLIEVVSRYFLEHFDDGHFDDFK
        MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK                           
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKVIILSLIEVVSRYFLEHFDDGHFDDFK

Query:  TSLLFFVDAVEYGVRSCSIVSFASFSLFHLHYNVMNLVCFPTKSKFHSCSSNEKEKIVYLSAILGSSCTKQLVYAPKSPKAEVIEWNYSLV
                   YGVRSCSIVSFASFSL                       SNEKEKIVYLSAILGSSCTKQLVYAPKSPKAEVIEWNYSL+
Subjt:  TSLLFFVDAVEYGVRSCSIVSFASFSLFHLHYNVMNLVCFPTKSKFHSCSSNEKEKIVYLSAILGSSCTKQLVYAPKSPKAEVIEWNYSLV
XP_008444542.1 PREDICTED: uncharacterized protein LOC103487833 [Cucumis melo]3.6e-2494.52Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEGQ+Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
XP_022962383.1 uncharacterized protein LOC111462843 [Cucurbita moschata]8.7e-26100Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
XP_038886006.1 uncharacterized protein LOC120076314 [Benincasa hispida]8.1e-2493.15Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEG++Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
TrEMBL top hitse value%identityAlignment
A0A1S3BAJ0 uncharacterized protein LOC1034878331.8e-2494.52Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDEGQ+Q+RKEEERLASVEARAKAAEAAQ+RQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
A0A6J1GGM5 uncharacterized protein LOC1114540281.7e-2289.04Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDE Q+Q+RKEEERLASVEAR+KAAEAAQ+RQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLK
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
A0A6J1HEN1 uncharacterized protein LOC1114628434.2e-26100Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
A0A6J1K846 uncharacterized protein LOC1114920134.2e-26100Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
A0A6J1KLT2 uncharacterized protein LOC1114964241.7e-2289.04Show/hide
Query:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        MGQC SCLDE Q+Q+RKEEERLASVEAR+KAAEAAQ+RQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLK
Subjt:  MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63905.1 unknown protein1.1e-1875.71Show/hide
Query:  CASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK
        C SC D  Q+++RKEEER AS EARAKAAEAAQ+R+E+F+KSAAGRAA+AQL   AKQSANTNKGEPVLK
Subjt:  CASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAATGCGCAAGTTGCCTCGACGAAGGCCAAGAGCAAGAGAGGAAGGAGGAAGAAAGATTGGCCTCCGTCGAAGCTCGCGCCAAAGCTGCTGAAGCCGCTCAGAA
AAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGGGCTGCACGTGCTCAGTTGGCCGCAAATGCAAAGCAATCTGCTAACACTAACAAGGGAGAACCAGTTCTTAAGG
TCATTATACTTTCACTCATAGAAGTTGTTTCACGCTATTTCTTGGAGCATTTCGATGATGGGCATTTCGATGATTTTAAAACTTCCTTATTGTTTTTTGTGGATGCAGTG
GAGTATGGGGTGAGGTCGTGCTCTATTGTCAGCTTCGCTTCTTTTTCGCTATTTCACTTGCATTACAATGTAATGAATCTTGTTTGTTTCCCTACTAAGAGCAAATTTCA
TTCGTGCAGTTCTAATGAAAAGGAAAAAATTGTATATTTATCCGCGATCCTGGGCTCCTCTTGTACAAAGCAACTTGTGTATGCTCCCAAGTCTCCCAAGGCAGAAGTTA
TTGAATGGAACTACAGTCTTGTATTTGTTATTCATGAATCAATGAAACCAAATAAGCTTCCAGTTTTTCTAGCTACAGAGTTGCTATCAGAAGTCGGGCCTTGGTGGGTT
CCCAACACGGGAAAATGCCTGTGA
mRNA sequenceShow/hide mRNA sequence
ACGGTCAATCCTAACCGTCCGATAAAATACGAATTCCAAAAAAATAAAATTGGTAGTGAAAATACCGATTGGAGATCTTGGAAAAAACCTGCAAGTGCAAGCAAAGCGAT
GGGGCAATGCGCAAGTTGCCTCGACGAAGGCCAAGAGCAAGAGAGGAAGGAGGAAGAAAGATTGGCCTCCGTCGAAGCTCGCGCCAAAGCTGCTGAAGCCGCTCAGAAAA
GGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGGGCTGCACGTGCTCAGTTGGCCGCAAATGCAAAGCAATCTGCTAACACTAACAAGGGAGAACCAGTTCTTAAGGTC
ATTATACTTTCACTCATAGAAGTTGTTTCACGCTATTTCTTGGAGCATTTCGATGATGGGCATTTCGATGATTTTAAAACTTCCTTATTGTTTTTTGTGGATGCAGTGGA
GTATGGGGTGAGGTCGTGCTCTATTGTCAGCTTCGCTTCTTTTTCGCTATTTCACTTGCATTACAATGTAATGAATCTTGTTTGTTTCCCTACTAAGAGCAAATTTCATT
CGTGCAGTTCTAATGAAAAGGAAAAAATTGTATATTTATCCGCGATCCTGGGCTCCTCTTGTACAAAGCAACTTGTGTATGCTCCCAAGTCTCCCAAGGCAGAAGTTATT
GAATGGAACTACAGTCTTGTATTTGTTATTCATGAATCAATGAAACCAAATAAGCTTCCAGTTTTTCTAGCTACAGAGTTGCTATCAGAAGTCGGGCCTTGGTGGGTTCC
CAACACGGGAAAATGCCTGTGA
Protein sequenceShow/hide protein sequence
MGQCASCLDEGQEQERKEEERLASVEARAKAAEAAQKRQEEFEKSAAGRAARAQLAANAKQSANTNKGEPVLKVIILSLIEVVSRYFLEHFDDGHFDDFKTSLLFFVDAV
EYGVRSCSIVSFASFSLFHLHYNVMNLVCFPTKSKFHSCSSNEKEKIVYLSAILGSSCTKQLVYAPKSPKAEVIEWNYSLVFVIHESMKPNKLPVFLATELLSEVGPWWV
PNTGKCL