; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G001560 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G001560
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGibberellin-regulated protein
Genome locationCmo_Chr05:678878..679725
RNA-Seq ExpressionCmoCh05G001560
SyntenyCmoCh05G001560
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598348.1 putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4198.81Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKC
        MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKS C
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKC

XP_022961995.1 peamaclein-like [Cucurbita moschata]2.5e-42100Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

XP_022997556.1 peamaclein-like [Cucurbita maxima]2.8e-3892.94Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        MKFLHLLS ILVLTSFLQLSLAAPG CSSKC SRCAKAGVQ+RCLKYCGICCEKCGCVPSGTYGNKHECPCYG++KNSKGKSKCP
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

XP_023546651.1 peamaclein [Cucurbita pepo subsp. pepo]1.5e-3995.29Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        MKFLHLLS ILVLTSFLQLSLAAPG CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYG++KNSKGKSKCP
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

XP_038885998.1 peamaclein-like [Benincasa hispida]5.9e-3683.53Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        MKFLHLL+W+LVLTSFL+LS +APG+C SKC  RCAKAGVQDRC+KYCGICC KCGCVPSGTYGNKHECPCYG +KNSKGK KCP
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LKN7 Uncharacterized protein1.9e-3581.18Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        MKFLHLL+W+L+LTSFL+LSL APG C  KC  RC+KAGV+DRC+KYCGICCEKCGCVPSGTYGNKHECPCYG +KNSKG SKCP
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

A0A1S3BAP8 peamaclein-like1.2e-3480Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        MKFLHLL+W+L+LTSFL+LSL APG C  KC  RC+KAGV+DRC+KYCGICC KCGCVPSGTYGNKHECPCYG +KNSKG SKCP
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

A0A6J1BV69 peamaclein-like2.2e-2871.59Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPG---VCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        MKFLHLL+ +L+L+ F+ LS+AA G    C+ KC  RCAKAGVQDRC+KYCGICCEKC CVPSGTYGNKHECPCY ++KNSK K KCP
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPG---VCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

A0A6J1HDT0 peamaclein-like1.2e-42100Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

A0A6J1K7T2 peamaclein-like1.4e-3892.94Show/hide
Query:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        MKFLHLLS ILVLTSFLQLSLAAPG CSSKC SRCAKAGVQ+RCLKYCGICCEKCGCVPSGTYGNKHECPCYG++KNSKGKSKCP
Subjt:  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

SwissProt top hitse value%identityAlignment
C0HLQ1 Cypmaclein1.6e-2067.8Show/hide
Query:  CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        C  +C  RC+KA   DRCLKYCGICCEKC CVP GTYGN+  CPCY  +KNSKG  KCP
Subjt:  CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

O80641 Gibberellin-regulated protein 85.6e-2160Show/hide
Query:  LVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        L+LTS   +  +A   C  KC  RC+KAG  + CLKYC ICC+KC CVPSGT+G+K ECPCY  +KNSKG SKCP
Subjt:  LVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

P86888 Peamaclein2.0e-2377.97Show/hide
Query:  CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        C SKC  RC+KAG Q+RCLKYCGICCEKC CVPSGTYGNK ECPCY  +KNSKG  KCP
Subjt:  CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 101.7e-2264.2Show/hide
Query:  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCG-CVPSGTYGNKHECPCYGRIKNSKGKSKCP
        L+  +L+ +S   LS A    C  KC  RC+KAG QDRCLKYC ICCEKC  CVPSGTYGNK ECPCY  +KNSKG SKCP
Subjt:  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCG-CVPSGTYGNKHECPCYGRIKNSKGKSKCP

Q948Z4 Snakin-13.4e-2666.25Show/hide
Query:  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        LL  +++  S +Q ++A    C SKC  RC+KAG+ DRCLKYCGICCE+C CVPSGTYGNKHECPCY   KNSKGKSKCP
Subjt:  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein1.7e-2058.44Show/hide
Query:  ILVLTSFLQLSLAAPGVCSSKCASRCAKAG-VQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        +L+ +SF  LS A    C  KC+ RC+KA    + CL+ C ICC+KC CVPSGTYGNK ECPCY  +KNSKG SKCP
Subjt:  ILVLTSFLQLSLAAPGVCSSKCASRCAKAG-VQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein1.1e-1957.89Show/hide
Query:  LVLTSFLQLSLAAPGVCSSKCASRCAKAG-VQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        L+LTS   +  +A   C  KC+ RC+KA    + CL+ C ICC+KC CVPSGTYGNK ECPCY  +KNSKG SKCP
Subjt:  LVLTSFLQLSLAAPGVCSSKCASRCAKAG-VQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein1.3e-2067.8Show/hide
Query:  CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        C  KC  RC +AG++DRCLKYCGICC+ C CVPSGTYGNKHEC CY    +SKG  KCP
Subjt:  CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

AT2G39540.1 Gibberellin-regulated family protein4.0e-2260Show/hide
Query:  LVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP
        L+LTS   +  +A   C  KC  RC+KAG  + CLKYC ICC+KC CVPSGT+G+K ECPCY  +KNSKG SKCP
Subjt:  LVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein1.2e-2364.2Show/hide
Query:  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCG-CVPSGTYGNKHECPCYGRIKNSKGKSKCP
        L+  +L+ +S   LS A    C  KC  RC+KAG QDRCLKYC ICCEKC  CVPSGTYGNK ECPCY  +KNSKG SKCP
Subjt:  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCG-CVPSGTYGNKHECPCYGRIKNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCCTTCATCTTCTTTCATGGATTCTCGTTCTCACCTCCTTCCTCCAGCTCTCCCTGGCTGCCCCAGGTGTTTGCAGTTCGAAATGCGCAAGTAGATGTGCAAA
AGCAGGGGTGCAGGATCGGTGCCTGAAGTACTGCGGGATATGCTGCGAGAAATGCGGGTGTGTGCCGTCTGGGACTTATGGGAACAAGCATGAGTGCCCTTGCTATGGGC
GGATTAAGAACTCCAAGGGGAAGTCCAAGTGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
GACAGTCTGGAATGTGCTGGTGGTTTTCACTTTCATTTAATAATTCCACCCCTTGAAACCAACAAATTCCGCTTTAAATACCCCTTCAAAACCACCCCCAAAATCCCACA
ACTTTCTCTGCATTTCCTCACACTCTGTTTGTTTCCCGGGAAAATGAAGTTCCTTCATCTTCTTTCATGGATTCTCGTTCTCACCTCCTTCCTCCAGCTCTCCCTGGCTG
CCCCAGGTGTTTGCAGTTCGAAATGCGCAAGTAGATGTGCAAAAGCAGGGGTGCAGGATCGGTGCCTGAAGTACTGCGGGATATGCTGCGAGAAATGCGGGTGTGTGCCG
TCTGGGACTTATGGGAACAAGCATGAGTGCCCTTGCTATGGGCGGATTAAGAACTCCAAGGGGAAGTCCAAGTGTCCTTAAAATCCACCCTCTACTGCCATCTGCTGCCT
AAGCTGTGTGTTTGTGTTGTACAATCTCATTGCCTCTTCACTTTGCATGGACTGTTATGAGTTGATCTACCTATTAAACTTAAAACCTCTGTTTCAGCTATATCTTCTCT
CAACTCTTTTCTATTTAGTGAAGATTGAGTTGTTTTATTTGGGACGATCTTGTCACGTGCAGTGGACGATGTGCACCCTCACTTACTTTTTTCTGCCTGCAATTAATTTC
TCAAACTTTAATGCAGTATCCCACCTCACCCTCCACCTATCAGACAACAACATTCATACTATTGTTACTAAAGAAACTAATAAAGATACTCTGTCC
Protein sequenceShow/hide protein sequence
MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP