; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G002200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G002200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHomeodomain-like superfamily protein
Genome locationCmo_Chr05:937944..939332
RNA-Seq ExpressionCmoCh05G002200
SyntenyCmoCh05G002200
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044847 - Transcription repressor KANADI


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598405.1 putative transcription factor KAN4, partial [Cucurbita argyrosperma subsp. sororia]6.2e-60100Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

KAG7029359.1 putative transcription factor KAN4, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-60100Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

XP_022962602.1 probable transcription factor KAN4 isoform X1 [Cucurbita moschata]6.2e-60100Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

XP_022962603.1 probable transcription factor KAN4 isoform X2 [Cucurbita moschata]6.2e-60100Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

XP_022962604.1 probable transcription factor KAN4 isoform X3 [Cucurbita moschata]6.2e-60100Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

TrEMBL top hitse value%identityAlignment
A0A6J1HD42 probable transcription factor KAN4 isoform X13.0e-60100Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

A0A6J1HF90 probable transcription factor KAN4 isoform X23.0e-60100Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

A0A6J1HHK2 probable transcription factor KAN4 isoform X33.0e-60100Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

A0A6J1K338 probable transcription factor KAN4 isoform X11.5e-5999.15Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTS HMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

A0A6J1K9S6 probable transcription factor KAN4 isoform X31.5e-5999.15Show/hide
Query:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
        MFTS HMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE
Subjt:  MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLE

Query:  LMNVKDLTLAHVKSHLQ
        LMNVKDLTLAHVKSHLQ
Subjt:  LMNVKDLTLAHVKSHLQ

SwissProt top hitse value%identityAlignment
Q0J235 Probable transcription factor RL94.1e-2287.5Show/hide
Query:  KRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        KR +RAPRMRWT+TLHA FVHAV+LLGGH+RATPKSVLELM+VKDLTLAHVKSHLQ
Subjt:  KRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ

Q93WJ9 Transcription repressor KAN11.2e-2185.71Show/hide
Query:  KRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        KR +RAPRMRWT++LHA FVHAV+LLGGH+RATPKSVLELM+VKDLTLAHVKSHLQ
Subjt:  KRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ

Q941I2 Probable transcription factor KAN35.7e-2488.14Show/hide
Query:  FGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        F  KR +RAPRMRWTTTLHAHFVHAVQLLGGH+RATPKSVLELM+V+DLTLAHVKSHLQ
Subjt:  FGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ

Q9C616 Probable transcription factor KAN24.8e-2386.44Show/hide
Query:  FGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        F  KR +RAPRMRWTTTLHA FVHAV+LLGGH+RATPKSVLELM+VKDLTLAHVKSHLQ
Subjt:  FGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ

Q9FJV5 Probable transcription factor KAN41.1e-3057.14Show/hide
Query:  LPDLSLQISPP-----------------SDSGSSGSDLTHENAAFLLP------------------PKTH---FKGDAKMGFGIKRRIRAPRMRWTTTLH
        +PDLSLQIS P                 SDSGSS SDL+HEN  F  P                  P+ +   FK  +    G+KR IRAPRMRWT+TLH
Subjt:  LPDLSLQISPP-----------------SDSGSSGSDLTHENAAFLLP------------------PKTH---FKGDAKMGFGIKRRIRAPRMRWTTTLH

Query:  AHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        AHFVHAVQLLGGH+RATPKSVLELMNVKDLTLAHVKSHLQ
Subjt:  AHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ

Arabidopsis top hitse value%identityAlignment
AT1G32240.1 Homeodomain-like superfamily protein3.4e-2486.44Show/hide
Query:  FGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        F  KR +RAPRMRWTTTLHA FVHAV+LLGGH+RATPKSVLELM+VKDLTLAHVKSHLQ
Subjt:  FGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ

AT4G17695.1 Homeodomain-like superfamily protein4.1e-2588.14Show/hide
Query:  FGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        F  KR +RAPRMRWTTTLHAHFVHAVQLLGGH+RATPKSVLELM+V+DLTLAHVKSHLQ
Subjt:  FGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ

AT5G16560.1 Homeodomain-like superfamily protein8.5e-2385.71Show/hide
Query:  KRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        KR +RAPRMRWT++LHA FVHAV+LLGGH+RATPKSVLELM+VKDLTLAHVKSHLQ
Subjt:  KRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ

AT5G42630.1 Homeodomain-like superfamily protein7.7e-3257.14Show/hide
Query:  LPDLSLQISPP-----------------SDSGSSGSDLTHENAAFLLP------------------PKTH---FKGDAKMGFGIKRRIRAPRMRWTTTLH
        +PDLSLQIS P                 SDSGSS SDL+HEN  F  P                  P+ +   FK  +    G+KR IRAPRMRWT+TLH
Subjt:  LPDLSLQISPP-----------------SDSGSSGSDLTHENAAFLLP------------------PKTH---FKGDAKMGFGIKRRIRAPRMRWTTTLH

Query:  AHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        AHFVHAVQLLGGH+RATPKSVLELMNVKDLTLAHVKSHLQ
Subjt:  AHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ

AT5G42630.2 Homeodomain-like superfamily protein7.7e-3257.14Show/hide
Query:  LPDLSLQISPP-----------------SDSGSSGSDLTHENAAFLLP------------------PKTH---FKGDAKMGFGIKRRIRAPRMRWTTTLH
        +PDLSLQIS P                 SDSGSS SDL+HEN  F  P                  P+ +   FK  +    G+KR IRAPRMRWT+TLH
Subjt:  LPDLSLQISPP-----------------SDSGSSGSDLTHENAAFLLP------------------PKTH---FKGDAKMGFGIKRRIRAPRMRWTTTLH

Query:  AHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ
        AHFVHAVQLLGGH+RATPKSVLELMNVKDLTLAHVKSHLQ
Subjt:  AHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTACCTCCACCCATATGATCACCAACACCACGGCACCGCCCTTGCCGGACCTTTCCTTGCAGATAAGCCCACCCTCTGATTCCGGCAGCAGCGGCAGCGATCTGAC
CCATGAGAATGCTGCGTTTCTTCTTCCTCCCAAAACCCATTTCAAGGGAGATGCCAAAATGGGCTTTGGGATTAAAAGAAGAATTAGAGCTCCAAGAATGAGATGGACCA
CCACTCTTCATGCCCATTTCGTCCACGCTGTTCAGCTCCTTGGCGGCCATGACAGGGCAACACCAAAATCTGTACTGGAGCTGATGAATGTCAAAGATTTAACCCTAGCT
CATGTAAAAAGCCATTTACAGAATTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTGGGGATTTCTCCTTCTGTGGGTTTGCTTATAAATCCATCATCGTCACACCTCCCTTCCTCTAAAGCTCCCATTTTTCGAAACCCCTTTCTCTATCTCCTTC
TCTCAAATCATAATCCACTCATAATATCAAAAGGGTCACCACCTTTTTCCTCAATCTCTTCTCCAAACCATTCATGTTTACCTCCACCCATATGATCACCAACACCACGG
CACCGCCCTTGCCGGACCTTTCCTTGCAGATAAGCCCACCCTCTGATTCCGGCAGCAGCGGCAGCGATCTGACCCATGAGAATGCTGCGTTTCTTCTTCCTCCCAAAACC
CATTTCAAGGGAGATGCCAAAATGGGCTTTGGGATTAAAAGAAGAATTAGAGCTCCAAGAATGAGATGGACCACCACTCTTCATGCCCATTTCGTCCACGCTGTTCAGCT
CCTTGGCGGCCATGACAGGGCAACACCAAAATCTGTACTGGAGCTGATGAATGTCAAAGATTTAACCCTAGCTCATGTAAAAAGCCATTTACAGAATTGA
Protein sequenceShow/hide protein sequence
MFTSTHMITNTTAPPLPDLSLQISPPSDSGSSGSDLTHENAAFLLPPKTHFKGDAKMGFGIKRRIRAPRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLA
HVKSHLQN