CuGenDBv2

Gene ID	CmoCh05G002480
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	5'-nucleotidase domain-containing protein 4 isoform X1
Genome location	Cmo_Chr05:1065047..1066307
RNA-Seq Expression	CmoCh05G002480
Synteny	CmoCh05G002480
Gene Ontology terms	GO:0016787 - hydrolase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022962347.1 5'-nucleotidase domain-containing protein 4 isoform X2 [Cucurbita moschata]

3.8e-17

100

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
        MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL

XP_022997486.1 5'-nucleotidase domain-containing protein 4 isoform X1 [Cucurbita maxima]

3.8e-17

100

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
        MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL

XP_022997488.1 5'-nucleotidase domain-containing protein 4 isoform X2 [Cucurbita maxima]

3.8e-17

100

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
        MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL

XP_023546849.1 5'-nucleotidase domain-containing protein 4-like isoform X1 [Cucurbita pepo subsp. pepo]

3.8e-17

100

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
        MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL

XP_023546850.1 5'-nucleotidase domain-containing protein 4-like isoform X2 [Cucurbita pepo subsp. pepo]

3.8e-17

100

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
        MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CT34 5'-nucleotidase domain-containing protein 4 isoform X3

4.0e-12

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTLECVYL
        MRIPRRQVS CLS FSL+F+YP SS NFLG PNCFIR+PK IHTL   +L
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTLECVYL

A0A6J1HCH7 5'-nucleotidase domain-containing protein 4 isoform X2

1.8e-17

100

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
        MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL

A0A6J1HCV3 5'-nucleotidase domain-containing protein 4 isoform X1

1.8e-17

100

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
        MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL

A0A6J1K7L7 5'-nucleotidase domain-containing protein 4 isoform X1

1.8e-17

100

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
        MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL

A0A6J1KE21 5'-nucleotidase domain-containing protein 4 isoform X2

1.8e-17

100

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Query:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
        MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL
Subjt:  MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCGAATTCCCAGGAGACAGGTTTCTCTTTGCCTCTCCTTGTTCTCGCTCGACTTCGCATACCCTTTTTCCTCCTCAAATTTTCTCGGAAATCCCAATTGCTTTATCCG
CAAACCCAAAGGGATTCATACCTTAGAATGTGTTTACCTCTCCCTTAGAAATGGCATCGAGAACACGATCATCTTGCTTCCTTTAGGCGTGAATTGCTGA

mRNA sequence

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AATAAATTAAAAAAAAATAATAATAAATGGAGGTTGAATCTTCGCCTTCTATTGTTCATCGGCGAAACTGATCGCCGCCGTCCCATCCAGCAGTAATCGTGAACCACAAT
CTCTCTCTTATAAGCGTTTTCCACGTGGTGCAAACAATCCGTGTTCGAAGATGATTCAGATTCAGCAACCGGAACGAGAGATCAAACCACGAGGCCTCCGCCCAATTTCC
GGTGGATAGGGAATCGAAAATTAGGGTTACGATTCCATTTTCCCAAATTATGTGTGATAACTATGATTCTGGGTTCGAATTCAATCTCCTCTACTCTTCATTTGTTTTGG
GAATTTAGATTTGTTCTCTTTCTTTCTCTTTCTCCTTCTCTCCCCTCTGCTTCAATTTCCCAATGCGACAGCTCCTAATCCAACATCTGTCGCGTCCATTTCGGAATCTG
ATTCTCTCTTCTCCTTTTTCTATATTTTTCTCCCTTCATTTTTAACTCTCCCTCCCCTTAAATGCCTATTTAAATTCCCACTATGCGAATTCCCAGGAGACAGGTTTCTC
TTTGCCTCTCCTTGTTCTCGCTCGACTTCGCATACCCTTTTTCCTCCTCAAATTTTCTCGGAAATCCCAATTGCTTTATCCGCAAACCCAAAGGGATTCATACCTTAGAA
TGTGTTTACCTCTCCCTTAGAAATGGCATCGAGAACACGATCATCTTGCTTCCTTTAGGCGTGAATTGCTGA

Protein sequence

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MRIPRRQVSLCLSLFSLDFAYPFSSSNFLGNPNCFIRKPKGIHTLECVYLSLRNGIENTIILLPLGVNC

CmoCh05G002480 (gene) of Cucurbita moschata (Rifu) v1 genome