; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G002570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G002570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein RER1B-like
Genome locationCmo_Chr05:1106159..1106836
RNA-Seq ExpressionCmoCh05G002570
SyntenyCmoCh05G002570
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022961871.1 uncharacterized protein LOC111462508 isoform X1 [Cucurbita moschata]4.7e-5295.08Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV
        MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT     +GENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV

Query:  RRFMAGAGKVILTMLKGLEEAQ
        RRFMAGAGKVILTMLKGLEEAQ
Subjt:  RRFMAGAGKVILTMLKGLEEAQ

XP_022961872.1 uncharacterized protein LOC111462508 isoform X2 [Cucurbita moschata]1.7e-54100Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA
        MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA

Query:  GAGKVILTMLKGLEEAQ
        GAGKVILTMLKGLEEAQ
Subjt:  GAGKVILTMLKGLEEAQ

XP_022996689.1 uncharacterized protein LOC111491858 isoform X1 [Cucurbita maxima]1.2e-4789.34Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV
        MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSV      + ENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPP IPTPIT+PS SPSPTT PGAAVPV
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV

Query:  RRFMAGAGKVILTMLKGLEEAQ
        RRFMAGAGKV+LTMLKGLEEAQ
Subjt:  RRFMAGAGKVILTMLKGLEEAQ

XP_022996690.1 uncharacterized protein LOC111491858 isoform X2 [Cucurbita maxima]4.4e-5094.02Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA
        MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSV D ENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPP IPTPIT+PS SPSPTT PGAAVPVRRFMA
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA

Query:  GAGKVILTMLKGLEEAQ
        GAGKV+LTMLKGLEEAQ
Subjt:  GAGKVILTMLKGLEEAQ

XP_023547096.1 uncharacterized protein LOC111806009 isoform X1 [Cucurbita pepo subsp. pepo]4.9e-4991.8Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV
        MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT     +GENGGFQMSRKVVGLTRKFQMLKVLAEQQT PP IPTPITAPS SPSPTT PGAAVPV
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV

Query:  RRFMAGAGKVILTMLKGLEEAQ
        RRFMAGAGKVILTMLKGLEEAQ
Subjt:  RRFMAGAGKVILTMLKGLEEAQ

TrEMBL top hitse value%identityAlignment
A0A5A7VFX0 Uncharacterized protein2.3e-3672.5Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSV----TDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVR
        M PRAYVLIFFFWSLLTILTPAL+ LS+ S PS V    TDGENGG +MSRKVVGLTRK+QMLK+LAE+Q  PP+IPTPITAP+ SP+P + PG AVPV 
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSV----TDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVR

Query:  RFMAGAGKVILTMLKGLEEA
        RFMA A K+IL+ LKGL+EA
Subjt:  RFMAGAGKVILTMLKGLEEA

A0A6J1HBA4 uncharacterized protein LOC111462508 isoform X28.4e-55100Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA
        MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA

Query:  GAGKVILTMLKGLEEAQ
        GAGKVILTMLKGLEEAQ
Subjt:  GAGKVILTMLKGLEEAQ

A0A6J1HBJ3 uncharacterized protein LOC111462508 isoform X12.3e-5295.08Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV
        MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT     +GENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV

Query:  RRFMAGAGKVILTMLKGLEEAQ
        RRFMAGAGKVILTMLKGLEEAQ
Subjt:  RRFMAGAGKVILTMLKGLEEAQ

A0A6J1K7I0 uncharacterized protein LOC111491858 isoform X22.2e-5094.02Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA
        MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSV D ENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPP IPTPIT+PS SPSPTT PGAAVPVRRFMA
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMA

Query:  GAGKVILTMLKGLEEAQ
        GAGKV+LTMLKGLEEAQ
Subjt:  GAGKVILTMLKGLEEAQ

A0A6J1K9F2 uncharacterized protein LOC111491858 isoform X15.9e-4889.34Show/hide
Query:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV
        MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSV      + ENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPP IPTPIT+PS SPSPTT PGAAVPV
Subjt:  MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVT-----DGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPV

Query:  RRFMAGAGKVILTMLKGLEEAQ
        RRFMAGAGKV+LTMLKGLEEAQ
Subjt:  RRFMAGAGKVILTMLKGLEEAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCTCGAGCTTATGTGTTAATCTTCTTCTTCTGGTCTCTCCTCACCATCCTCACTCCCGCCCTCCTCCTCCTCTCCGACACTTCGAATCCCTCATCGGTCACCGA
TGGCGAAAATGGAGGGTTTCAAATGAGTAGAAAAGTTGTGGGGTTGACCAGAAAATTTCAGATGTTGAAAGTTTTGGCTGAACAACAAACCACACCGCCGATGATTCCCA
CTCCCATTACAGCCCCGTCGCTGTCGCCGTCTCCGACTACGCCTCCGGGTGCCGCCGTTCCGGTTCGGAGGTTCATGGCTGGTGCTGGGAAAGTCATATTGACAATGTTG
AAGGGATTGGAAGAGGCACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCCTCGAGCTTATGTGTTAATCTTCTTCTTCTGGTCTCTCCTCACCATCCTCACTCCCGCCCTCCTCCTCCTCTCCGACACTTCGAATCCCTCATCGGTCACCGA
TGGCGAAAATGGAGGGTTTCAAATGAGTAGAAAAGTTGTGGGGTTGACCAGAAAATTTCAGATGTTGAAAGTTTTGGCTGAACAACAAACCACACCGCCGATGATTCCCA
CTCCCATTACAGCCCCGTCGCTGTCGCCGTCTCCGACTACGCCTCCGGGTGCCGCCGTTCCGGTTCGGAGGTTCATGGCTGGTGCTGGGAAAGTCATATTGACAATGTTG
AAGGGATTGGAAGAGGCACAGTAATTAAGGCTGGTAGGATATAATTCAGTCTCTGAATATTTTATTTATTTTAAAATTAAAAAAAAAATCACCATATTGTTTGTTGGAAA
AATAAAAATTATTTTGACCTTTTTGGTAAATTAAAAAAAAATGAAAGAGGAAATTGTTTGTAAATATTTTACCTGTTCTTTGTTGCTATAAAGCAATTAAAGAAAATTTA
AATAAATGTATTGGTTTTC
Protein sequenceShow/hide protein sequence
MNPRAYVLIFFFWSLLTILTPALLLLSDTSNPSSVTDGENGGFQMSRKVVGLTRKFQMLKVLAEQQTTPPMIPTPITAPSLSPSPTTPPGAAVPVRRFMAGAGKVILTML
KGLEEAQ