; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G002970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G002970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCell growth defect protein
Genome locationCmo_Chr05:1295877..1299336
RNA-Seq ExpressionCmoCh05G002970
SyntenyCmoCh05G002970
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039632 - Transmembrane protein 42


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598488.1 hypothetical protein SDJN03_08266, partial [Cucurbita argyrosperma subsp. sororia]9.2e-5699.15Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILI+M
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

XP_022144157.1 uncharacterized protein LOC111013916 [Momordica charantia]4.4e-5089.74Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
        MEG+KGKKGY+WAISAG NAA AAIAAKLFSSTLIR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQWFVGA+LIV+
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM

Query:  GVLILNQSSIEKKESKD
        GVLILN+SSIEKKE+KD
Subjt:  GVLILNQSSIEKKESKD

XP_022961823.1 uncharacterized protein LOC111462473 [Cucurbita moschata]7.1e-56100Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

XP_022997366.1 uncharacterized protein LOC111492304 [Cucurbita maxima]6.0e-5599.15Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSFQWFVGAILIVM
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

XP_038885716.1 multidrug resistance protein EbrB isoform X2 [Benincasa hispida]4.2e-4888.89Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
        MEG+KG KGY WAI+AGLNAAF+AIAAKLFS TLIRYGLV+AFNLAMWGCYVNSLK LSSLQATGTNFSANFLCSGLAGFFLFEE LSFQWFVGA+LIV+
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM

Query:  GVLILNQSSIEKKESKD
        GVLILN+SSI KKESKD
Subjt:  GVLILNQSSIEKKESKD

TrEMBL top hitse value%identityAlignment
A0A0A0LPF1 Uncharacterized protein5.9e-4891.15Show/hide
Query:  KGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVMGVLI
        +G KGY+WAISAGLNAAFAAIAAKLFS TLIRY LVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSF+WFVGA+LIV+GVLI
Subjt:  KGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVMGVLI

Query:  LNQSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNQSSIEKKESKD

A0A1S3BB59 multidrug resistance protein EbrB1.0e-4790.27Show/hide
Query:  KGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVMGVLI
        +G KGY+WAISAGLNAA +AIAAKLFS T  RYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSFQWFVGAILIV+GVLI
Subjt:  KGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVMGVLI

Query:  LNQSSIEKKESKD
        LN+SSIEKKESKD
Subjt:  LNQSSIEKKESKD

A0A6J1CSW2 uncharacterized protein LOC1110139162.2e-5089.74Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
        MEG+KGKKGY+WAISAG NAA AAIAAKLFSSTLIR+GLVIAFNLAMWGC+VNSLKALSSLQATGTNFS NFLCSGLAGFFLFEE LSFQWFVGA+LIV+
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM

Query:  GVLILNQSSIEKKESKD
        GVLILN+SSIEKKE+KD
Subjt:  GVLILNQSSIEKKESKD

A0A6J1HCY1 uncharacterized protein LOC1114624733.4e-56100Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

A0A6J1K7A2 uncharacterized protein LOC1114923042.9e-5599.15Show/hide
Query:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM
        MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEE LSFQWFVGAILIVM
Subjt:  MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVM

Query:  GVLILNQSSIEKKESKD
        GVLILNQSSIEKKESKD
Subjt:  GVLILNQSSIEKKESKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30845.1 unknown protein8.7e-3665.77Show/hide
Query:  KKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVMGVLILN
        ++GY+ A++AGLNAA AAI+AK F+S +I+YGLV+  N+ MW CYVNSL+ALSSLQAT TNF+ANFL SGLAG FLF+E LSF+WF GA+ I  GVLIL+
Subjt:  KKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVMGVLILN

Query:  QSSIEKKESKD
        +SS++KK S D
Subjt:  QSSIEKKESKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGAGAAAGGGGAAGAAGGGTTACATGTGGGCAATTTCAGCTGGTCTCAACGCTGCGTTCGCCGCCATTGCCGCCAAGCTTTTCTCCTCTACGTTAATTAGGTA
TGGACTGGTTATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAACAGCTTAAAAGCTCTCTCGTCATTACAAGCTACAGGGACCAACTTTTCAGCTAACTTTCTTT
GTTCTGGTCTAGCCGGTTTCTTTTTGTTCGAAGAACCACTATCATTTCAGTGGTTTGTAGGTGCCATATTGATCGTAATGGGCGTGCTGATTTTGAATCAGTCGAGCATT
GAGAAGAAGGAATCAAAGGACTGA
mRNA sequenceShow/hide mRNA sequence
GCCGGTTGGCATCCCGACCGCGTTCAGTCCAAGCCGGGTTCGCCACGTATGGAGGTTTTCGTCTTCTTGCCTACCGCACAACTCAGAGAGGAGAATTTTGAACCCTGCAA
TGGAAGGGAGAAAGGGGAAGAAGGGTTACATGTGGGCAATTTCAGCTGGTCTCAACGCTGCGTTCGCCGCCATTGCCGCCAAGCTTTTCTCCTCTACGTTAATTAGGTAT
GGACTGGTTATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAACAGCTTAAAAGCTCTCTCGTCATTACAAGCTACAGGGACCAACTTTTCAGCTAACTTTCTTTG
TTCTGGTCTAGCCGGTTTCTTTTTGTTCGAAGAACCACTATCATTTCAGTGGTTTGTAGGTGCCATATTGATCGTAATGGGCGTGCTGATTTTGAATCAGTCGAGCATTG
AGAAGAAGGAATCAAAGGACTGACCTCTGCTCTATTTTCATTGAATCTCTTGTTTCCAAATTTGTGTTTACATATTTCTTACCATGCTTTCGTTTTTCTTCCTACTGTTC
AAACATCGACCATGTAAGATTTGAATTTTCCAGCTCCAAAAAAAAAAAAATTAATGCTTCGATCGGG
Protein sequenceShow/hide protein sequence
MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQWFVGAILIVMGVLILNQSSI
EKKESKD