; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G003000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G003000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCmo_Chr05:1322992..1323327
RNA-Seq ExpressionCmoCh05G003000
SyntenyCmoCh05G003000
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598492.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]4.7e-4994.59Show/hide
Query:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        MAVVKQIMKRCSGLRSNKNKNNQLQC      GGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
Subjt:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

Query:  QVFQSLTSMLR
        QVFQSLTSMLR
Subjt:  QVFQSLTSMLR

XP_022962125.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]6.3e-54100Show/hide
Query:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
Subjt:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

Query:  QVFQSLTSMLR
        QVFQSLTSMLR
Subjt:  QVFQSLTSMLR

XP_022997035.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]5.2e-4893.64Show/hide
Query:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGG      G GEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
Subjt:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

Query:  QVFQSLTSML
        QVFQSLTSML
Subjt:  QVFQSLTSML

XP_023547122.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]7.0e-4593.27Show/hide
Query:  MKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLT
        MKRCSGLRS+KNKNNQLQCGGVGGG      GAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLT
Subjt:  MKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLT

Query:  SMLR
        SMLR
Subjt:  SMLR

XP_038886317.1 auxin-responsive protein SAUR50-like [Benincasa hispida]1.3e-3880Show/hide
Query:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ
        AVVKQI KRCS LR NKNKN  LQCG           G  EIPVDVPKGHFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGF+H+MGLTIPCEEQ
Subjt:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ

Query:  VFQSLTSMLR
        VFQSLTSMLR
Subjt:  VFQSLTSMLR

TrEMBL top hitse value%identityAlignment
A0A0A0LRM7 Uncharacterized protein2.2e-3675Show/hide
Query:  AVVKQIMKRCSGLR------SNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLT
        AVVKQI KRCS LR      +N N N  LQCG           G  EIPVDVPKGHFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGFSH+MGLT
Subjt:  AVVKQIMKRCSGLR------SNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLT

Query:  IPCEEQVFQSLTSMLR
        IPCEEQVFQSLTSMLR
Subjt:  IPCEEQVFQSLTSMLR

A0A1S3BB62 auxin-induced protein 15A-like3.2e-3575.21Show/hide
Query:  AVVKQIMKRCSGLR---SNKNKNN-----QLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMG
        AVVKQI KRCS LR    NKN NN      LQCGG          G  EIPVDVPKGHFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGFSH MG
Subjt:  AVVKQIMKRCSGLR---SNKNKNN-----QLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMG

Query:  LTIPCEEQVFQSLTSML
        LTIPCEEQVF+SLTSML
Subjt:  LTIPCEEQVFQSLTSML

A0A5A7VD05 Auxin-induced protein 15A-like3.2e-3575.21Show/hide
Query:  AVVKQIMKRCSGLR---SNKNKNN-----QLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMG
        AVVKQI KRCS LR    NKN NN      LQCGG          G  EIPVDVPKGHFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGFSH MG
Subjt:  AVVKQIMKRCSGLR---SNKNKNN-----QLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMG

Query:  LTIPCEEQVFQSLTSML
        LTIPCEEQVF+SLTSML
Subjt:  LTIPCEEQVFQSLTSML

A0A6J1HE76 auxin-responsive protein SAUR50-like3.0e-54100Show/hide
Query:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
Subjt:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

Query:  QVFQSLTSMLR
        QVFQSLTSMLR
Subjt:  QVFQSLTSMLR

A0A6J1K8F3 auxin-responsive protein SAUR50-like2.5e-4893.64Show/hide
Query:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGG      G GEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
Subjt:  MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

Query:  QVFQSLTSML
        QVFQSLTSML
Subjt:  QVFQSLTSML

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.2e-2659.09Show/hide
Query:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ
        A++KQI+KRCS L                G   G G     +P+DVPKGHF VYV ENRSRYIVP++ LT PEFQ LLQ AEEEFGF H MGLTIPC+E 
Subjt:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ

Query:  VFQSLTSMLR
        VFQ+LTSM+R
Subjt:  VFQSLTSMLR

P0DKL1 Auxin-responsive protein SAUR505.2e-1945.79Show/hide
Query:  VKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVF
        +K+I+K+CS    N + +                     +P DVPKGHFVVYV E R+RYIVP++ L  P FQ LLQ +EEEFGF+H MG+ IPC+E  F
Subjt:  VKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVF

Query:  QSLTSML
         S  SM+
Subjt:  QSLTSML

P32295 Indole-3-acetic acid-induced protein ARG72.3e-1455.22Show/hide
Query:  VDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHM-GLTIPCEEQVFQSLTSML
        +D PKG+  VYV EN  R+++P++ L  P FQ LL  AEEEFG+ H M GLTIPC E +FQ +TS L
Subjt:  VDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHM-GLTIPCEEQVFQSLTSML

P33081 Auxin-induced protein 15A2.3e-1456.06Show/hide
Query:  DVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHM-GLTIPCEEQVFQSLTSML
        D PKG+  VYV E   R+++P++ L  P FQ LL  AEEEFG+ H M GLTIPC E VFQ +TS L
Subjt:  DVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHM-GLTIPCEEQVFQSLTSML

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 107.0e-2456.36Show/hide
Query:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ
        A +KQI+KRCS LR  KN N            G       ++P DVPKGHF VYV  NRSRYIVP++ L   EFQ LL+LAEEEFGF H MGLTIPC+E 
Subjt:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ

Query:  VFQSLTSMLR
         F+SL SM R
Subjt:  VFQSLTSMLR

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family2.2e-2553.57Show/hide
Query:  VVKQIMKRCS--GLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE
        ++KQI+KRCS  G + +   N+  +  G              +P+DVPKGHFVVYV  NR RY++P++ LT PEFQ+LLQ AEEEFGF H+MGLTIPCEE
Subjt:  VVKQIMKRCS--GLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEE

Query:  QVFQSL-TSMLR
          F+SL TSML+
Subjt:  QVFQSL-TSMLR

AT1G75580.1 SAUR-like auxin-responsive protein family1.7e-2859.09Show/hide
Query:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ
        A++KQI+KRCS L   K ++N              G      P++VPKGHFVVYV ENR RY+VP++ LT PEFQ+LLQ AEEEFGF H MGLTIPCEE 
Subjt:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ

Query:  VFQSLTSMLR
        VF+SLTSMLR
Subjt:  VFQSLTSMLR

AT2G16580.1 SAUR-like auxin-responsive protein family1.7e-2554.55Show/hide
Query:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ
        A+++QI+KRCS L               G   GG G    ++P+DVPKGHF VYV  NRSRYIVP++ LT+ +FQ LL+ AEEEFGF H MGLTIPC+E 
Subjt:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ

Query:  VFQSLTSMLR
         FQ LTSM+R
Subjt:  VFQSLTSMLR

AT2G21220.1 SAUR-like auxin-responsive protein family4.1e-2758.72Show/hide
Query:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ
        A++KQI+KRCS L  N       QC    G           +PVDVPKGHF VYV E RSRYIVP++ LT P+F+ LLQ AEEEFGF+H MGLTIPCEE 
Subjt:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ

Query:  VFQSLTSML
        VF+SLTSM+
Subjt:  VFQSLTSML

AT4G34760.1 SAUR-like auxin-responsive protein family8.2e-2859.09Show/hide
Query:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ
        A++KQI+KRCS L                G   G G     +P+DVPKGHF VYV ENRSRYIVP++ LT PEFQ LLQ AEEEFGF H MGLTIPC+E 
Subjt:  AVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQ

Query:  VFQSLTSMLR
        VFQ+LTSM+R
Subjt:  VFQSLTSMLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGTGAAGCAAATTATGAAGCGTTGCTCAGGTTTGAGGAGCAATAAGAACAAGAACAATCAGCTGCAATGCGGCGGCGTTGGCGGCGGCGGCGGCGGT
GCCGGTGCCGGTGCAGGGGAGATTCCGGTGGATGTGCCGAAGGGGCATTTTGTGGTGTATGTGAGTGAGAATAGGAGCCGCTACATCGTGCCGCTCACGGTCTTG
ACGTCGCCTGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTTGGGTTCAGTCACCATATGGGCCTTACTATCCCTTGCGAGGAACAGGTCTTTCAGTCC
CTTACTTCCATGCTCCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGGTGAAGCAAATTATGAAGCGTTGCTCAGGTTTGAGGAGCAATAAGAACAAGAACAATCAGCTGCAATGCGGCGGCGTTGGCGGCGGCGGCGGCGGT
GCCGGTGCCGGTGCAGGGGAGATTCCGGTGGATGTGCCGAAGGGGCATTTTGTGGTGTATGTGAGTGAGAATAGGAGCCGCTACATCGTGCCGCTCACGGTCTTG
ACGTCGCCTGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTTGGGTTCAGTCACCATATGGGCCTTACTATCCCTTGCGAGGAACAGGTCTTTCAGTCC
CTTACTTCCATGCTCCGATAA
Protein sequenceShow/hide protein sequence
MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQS
LTSMLR