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CmoCh05G003100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G003100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein
Genome locationCmo_Chr05:1373293..1373718
RNA-Seq ExpressionCmoCh05G003100
SyntenyCmoCh05G003100
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8057246.1 hypothetical protein FH972_013952 [Carpinus fangiana]1.3e-3553.52Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW +RERRGPAWKQGW EQ + SI+PPP PLL I GI+V+LL +SS+++++SQ+  T INFK F  LLPL+ +FV + I +YGR+VI+ P TK++ V+ 
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDH-TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
               P G+ +LL++L++++SYQ YFHSKW+P IW   YY
Subjt:  TDH-TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

KAG6598502.1 hypothetical protein SDJN03_08280, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6998.58Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTT INFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        TD TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
Subjt:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

KAG7020455.1 hypothetical protein SDJN02_17139, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-6186.62Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGP+WKQGWAEQA+ASI PPP+PLLA+LGILVILLSVSS+SS+RSQVK T +NFK+FFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDHT-ASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
         + T ASP G A LLVVLLVLISYQPYFHSKWFP+IWRPYYY
Subjt:  TDHT-ASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

KAG7029438.1 hypothetical protein SDJN02_07777, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-7199.29Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFS+HRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
Subjt:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

XP_031737284.1 uncharacterized protein LOC116402215 [Cucumis sativus]5.5e-6389.51Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQA++SITPPP+PLLAILGILVILLSVSS+SS+RSQVK T INFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        T+   +ASP G AVLLVVLLVL+SYQPYFHSKWFPAIWRPYYY
Subjt:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

TrEMBL top hitse value%identityAlignment
A0A0A0LNS9 Uncharacterized protein2.7e-6389.51Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQA++SITPPP+PLLAILGILVILLSVSS+SS+RSQVK T INFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        T+   +ASP G AVLLVVLLVL+SYQPYFHSKWFPAIWRPYYY
Subjt:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

A0A2P5DBR5 Transmembrane protein8.1e-3652.52Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW +RE    +WK GW E+ +AS++ PP PL+A++GI+V+LLS+SS+++++SQV+ T I FKLF L LPL+ +F+ NS+ +YG L II+P TK EP   
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPY
        +    SP GVA+LL++L+VLISY+ YFHSKW+P +W  Y
Subjt:  TDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPY

A0A5A7VAG3 Uncharacterized protein2.7e-6389.51Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWAEQA++SITPPP+PLLAILGILVILLSVSS+SS+RSQVK T INFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
        T+   +ASP G AVLLVVLLVL+SYQPYFHSKWFPAIWRPYYY
Subjt:  TD--HTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

A0A5N6R8L3 Uncharacterized protein6.2e-3653.52Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW +RERRGPAWKQGW EQ + SI+PPP PLL I GI+V+LL +SS+++++SQ+  T INFK F  LLPL+ +FV + I +YGR+VI+ P TK++ V+ 
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  TDH-TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY
               P G+ +LL++L++++SYQ YFHSKW+P IW   YY
Subjt:  TDH-TASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPYYY

W9RNV3 Uncharacterized protein8.1e-3657.86Show/hide
Query:  MGWLIRE-RRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVY
        MGWLIRE R G +WK GW E+ +AS+T PP PLLAI+GI+V+LLSVSS+++++SQ++ T I F+LF LLLPLV +FV +S+ +YG ++++ PRTK E   
Subjt:  MGWLIRE-RRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVY

Query:  VTDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPY
        V++   +P GV VLLVVL VLISYQ YF SKW+P IW  Y
Subjt:  VTDHTASPLGVAVLLVVLLVLISYQPYFHSKWFPAIWRPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein8.1e-0429.57Show/hide
Query:  SITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVF-------VGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVV
        S++P P P+L IL +  + L  S + S     ++         LL+PL  +        + N     G        T + P    D  +SP GVA L+V+
Subjt:  SITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVF-------VGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVV

Query:  LLVLISYQPYFHSKW
        LLVL+ YQ  F   W
Subjt:  LLVLISYQPYFHSKW

AT2G31940.1 unknown protein2.8e-0428.57Show/hide
Query:  PPKPLLAILGILVILL--SVSSFSSHRSQVKTTGINFKLFFLLLPLVFV----FVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVVLLVLI
        PP PL   + +L++L+  ++S ++S+   ++     FKL  +  PL+ +    F+ +     G +  +    + E +Y    T  P GVA +LV L  ++
Subjt:  PPKPLLAILGILVILL--SVSSFSSHRSQVKTTGINFKLFFLLLPLVFV----FVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVVLLVLI

Query:  SYQPYFHSKWFP
        SYQ  F  +WFP
Subjt:  SYQPYFHSKWFP

AT5G19875.1 unknown protein2.8e-0431.13Show/hide
Query:  PKPLLAILGILV-ILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVVLLVLISYQPYF
        P P L  L I+V  +LS + + +  S ++ T  + KL F+  PL  + + +     G L    P  + + ++     +SP GVA +LV++L ++SYQ  F
Subjt:  PKPLLAILGILV-ILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGVAVLLVVLLVLISYQPYF

Query:  HSKWFP
          +WFP
Subjt:  HSKWFP

AT5G42146.1 unknown protein2.3e-2240.74Show/hide
Query:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRT--KLEPV
        MGW I+ERRG +WK+GW E+ + + + PP  LLA+L I+ +LL +SS+  ++ +V+ T  N KLF L LP++FVFV  S+    RL+  +  +    +  
Subjt:  MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRT--KLEPV

Query:  YVTDHTASPLGVAVLLVVLLVLISYQPYFHSKWFP
         +      P GV ++L++LL+L+S Q YFHS W+P
Subjt:  YVTDHTASPLGVAVLLVVLLVLISYQPYFHSKWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGTTGATAAGAGAGAGAAGAGGGCCAGCATGGAAACAAGGATGGGCGGAGCAGGCCATAGCCTCCATAACTCCACCACCAAAGCCTCTGCTTGCCATACTTGG
AATCTTGGTCATTCTGCTATCTGTGTCATCATTTTCAAGCCACAGGTCACAGGTGAAGACAACAGGGATCAACTTTAAGCTCTTCTTCTTGCTCTTACCTCTAGTATTTG
TCTTTGTTGGAAACTCCATTGTTAGATATGGTCGTCTTGTAATCATCACTCCGAGAACAAAGCTCGAGCCGGTTTACGTCACCGACCACACTGCGTCGCCTTTGGGGGTG
GCGGTTTTGCTGGTTGTGTTGTTGGTCTTGATATCTTATCAGCCATACTTTCACTCTAAATGGTTTCCAGCAATATGGAGACCATATTATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGTTGATAAGAGAGAGAAGAGGGCCAGCATGGAAACAAGGATGGGCGGAGCAGGCCATAGCCTCCATAACTCCACCACCAAAGCCTCTGCTTGCCATACTTGG
AATCTTGGTCATTCTGCTATCTGTGTCATCATTTTCAAGCCACAGGTCACAGGTGAAGACAACAGGGATCAACTTTAAGCTCTTCTTCTTGCTCTTACCTCTAGTATTTG
TCTTTGTTGGAAACTCCATTGTTAGATATGGTCGTCTTGTAATCATCACTCCGAGAACAAAGCTCGAGCCGGTTTACGTCACCGACCACACTGCGTCGCCTTTGGGGGTG
GCGGTTTTGCTGGTTGTGTTGTTGGTCTTGATATCTTATCAGCCATACTTTCACTCTAAATGGTTTCCAGCAATATGGAGACCATATTATTATTAG
Protein sequenceShow/hide protein sequence
MGWLIRERRGPAWKQGWAEQAIASITPPPKPLLAILGILVILLSVSSFSSHRSQVKTTGINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTDHTASPLGV
AVLLVVLLVLISYQPYFHSKWFPAIWRPYYY