; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G003370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G003370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTranscription initiation factor TFIID subunit 10
Genome locationCmo_Chr05:1503643..1506591
RNA-Seq ExpressionCmoCh05G003370
SyntenyCmoCh05G003370
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:1990841 - promoter-specific chromatin binding (molecular function)
InterPro domainsIPR003923 - Transcription initiation factor TFIID, 23-30kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598532.1 Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperma subsp. sororia]7.2e-68100Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_004138687.1 transcription initiation factor TFIID subunit 10 [Cucumis sativus]1.6e-6799.26Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_008445293.1 PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo]2.1e-6799.26Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_022962589.1 transcription initiation factor TFIID subunit 10 [Cucurbita moschata]7.2e-68100Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_038886703.1 transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida]2.1e-6799.26Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

TrEMBL top hitse value%identityAlignment
A0A0A0LPV6 Transcription initiation factor TFIID subunit 107.7e-6899.26Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A1S3BD75 Transcription initiation factor TFIID subunit 101.0e-6799.26Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1BVJ5 Transcription initiation factor TFIID subunit 108.0e-6594.85Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1HHI7 Transcription initiation factor TFIID subunit 103.5e-68100Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1KB50 Transcription initiation factor TFIID subunit 103.5e-68100Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

SwissProt top hitse value%identityAlignment
O04173 Transcription initiation factor TFIID subunit 109.1e-5883.09Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

Q12962 Transcription initiation factor TFIID subunit 107.3e-2349.04Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTM+DL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q8K0H5 Transcription initiation factor TFIID subunit 107.3e-2349.04Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTM+DL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q9U5W9 Transcription initiation factor TFIID subunit 107.1e-1838.6Show/hide
Query:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMDDLSKA
        +++ + E +  L +Y+PTIPD L  H L  +GF   D +++RLV+V+ QKF++D+A+DALQHCK R   +         K  K  KD++  L M+DL  A
Subjt:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMDDLSKA

Query:  LREYGVNVKHQEYF
        L ++G+ ++  +YF
Subjt:  LREYGVNVKHQEYF

Q9XZT7 Transcription initiation factor TFIID subunit 10b9.9e-2039.68Show/hide
Query:  NHSQQATG------SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKD
        +H Q + G       R    + LS+F++ L +YTP IPD +  HYL   GFQ  D R++RL+++A QK+++D+  DALQH KAR            + KD
Subjt:  NHSQQATG------SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKD

Query:  KRLILTMDDLSKALREYGVNVKHQEY
        ++  LTM+DL  AL +YG+NV+  +Y
Subjt:  KRLILTMDDLSKALREYGVNVKHQEY

Arabidopsis top hitse value%identityAlignment
AT4G31720.1 TBP-associated factor II 156.5e-5983.09Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

AT4G31720.2 TBP-associated factor II 156.5e-5983.09Show/hide
Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCATAGCCAACAAGCGACAGGGAGCAGGCACGACGATGACGCAGCGCTCTCCGAGTTTCTAGCATCTCTAATGGAGTATACTCCCACTATTCCCGACGAGTTGGT
GGAACATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGATCAGGCTTGTTGCTGTTGCTACGCAGAAGTTCGTTGCAGATGTTGCAAGTGATGCTCTCC
AGCATTGTAAGGCGAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCTTAATATTGACCATGGATGATCTCTCGAAGGCTCTTCGTGAG
TATGGCGTGAATGTGAAACATCAAGAATATTTTGCTGATAGCCCTTCAACCGGAGTGGATTCTACTTCCAGAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
AAAGCTTCTCAAATCGAGGAGTAATTCGAACGAGCTTCGTTCGAAGAGAGGGAAGACGAAGAAGATGAACCATAGCCAACAAGCGACAGGGAGCAGGCACGACGATGACG
CAGCGCTCTCCGAGTTTCTAGCATCTCTAATGGAGTATACTCCCACTATTCCCGACGAGTTGGTGGAACATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGA
TTGATCAGGCTTGTTGCTGTTGCTACGCAGAAGTTCGTTGCAGATGTTGCAAGTGATGCTCTCCAGCATTGTAAGGCGAGACAGGCAGCAGTAGTGAAAGACAAAAGGGA
TAAACAACAAAAGGATAAGCGCTTAATATTGACCATGGATGATCTCTCGAAGGCTCTTCGTGAGTATGGCGTGAATGTGAAACATCAAGAATATTTTGCTGATAGCCCTT
CAACCGGAGTGGATTCTACTTCCAGAGAGGAATGAGTTGGAATAACGGTTAAAATGTCTCATCGTTGTGTTCGTGAATATACTGATGCATCATAGTTCAGGTTGGAGTAC
TCTTGCTGCCTGCCATGCCCAATTATTAGTCATGTTAGTATTGCTATCATTAAGTAGCCGTCTGTGAACTGTCATTGCAGTAGACATGTTAAGCGTTTTCTACATGTCTA
CTAAATGAAACTGTGCATAACGAAACCCAAAACATCATTCTTGTTCATACAAGGTTATGTTATCATGATGCATTCTCCATGGATTTGCAGCTTGTAAGAACTCTAGTCGA
TCTTATTTTAACTCTTAGAAGTGAGGATAAGTAACGCGACCATGTCTCGGAGATCTGAATTTTATTATTATGTGTGCAAATCTTTGAGTGGGGTTTGAACGGATCTTCCC
AATATGAACGACAAAGTGG
Protein sequenceShow/hide protein sequence
MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALRE
YGVNVKHQEYFADSPSTGVDSTSREE