; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G003590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G003590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCmo_Chr05:1626213..1627037
RNA-Seq ExpressionCmoCh05G003590
SyntenyCmoCh05G003590
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064893.1 putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]3.4e-14994.16Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNI SDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPVVYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

XP_008445259.1 PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo]3.4e-14994.16Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNI SDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPVVYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

XP_022962201.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]4.7e-159100Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

XP_022996818.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima]2.0e-15798.91Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGN PTCGTD+FCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNI SDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

XP_038885551.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]3.0e-15094.53Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPLGAFKNIND+NY+TLKDNVDMLKLIQLGLTFSDENGNLPTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNI +DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPVVYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR+TFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

TrEMBL top hitse value%identityAlignment
A0A0A0LMH2 Poly(A)-specific ribonuclease3.6e-14993.8Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNI SDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPV+YDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

A0A1S3BD45 Poly(A)-specific ribonuclease1.6e-14994.16Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNI SDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPVVYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

A0A5A7V9Q6 Poly(A)-specific ribonuclease1.6e-14994.16Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNI SDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPVVYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

A0A6J1HCG0 Poly(A)-specific ribonuclease2.3e-159100Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

A0A6J1KC39 Poly(A)-specific ribonuclease9.5e-15898.91Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGN PTCGTD+FCIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREFNI SDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 72.4e-8156.51Show/hide
Query:  SIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNI
        S +I EVW  NL+EE   IR+++ K+NY+AMDTEFPGVV RP+G F++  DY YQ L+ NVD+LK+IQLGLTF +E G  P  GT +   WQFNF+ FN+
Subjt:  SIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNI

Query:  VSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDIKHLMKFCN
          D++A DSIELL   GI F+K+ EEGI+   F ELLM+SGVVL   V W++FHSGYDFGYL+K+LT   LPE++  FF+++ ++FPV+YD+K+LMK C 
Subjt:  VSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDIKHLMKFCN

Query:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQ--KYAGVLYGLG-----VENG
        +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R  FF   I   KY G LYGLG     V+NG
Subjt:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQ--KYAGVLYGLG-----VENG

Q9LEU4 Probable CCR4-associated factor 1 homolog 102.0e-12075.75Show/hide
Query:  KGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVDKF+YIAMDTEFPGVVL+P+  FK  ND NY+TLK+NVD+LKLIQ+GLTFSDENGNLPTCGTD FCIWQFNFRE
Subjt:  KGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFRE

Query:  FNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDIKHLMK
        FNI  DI+AS+SIELLRQCGIDF+KN E+GIDV RFGEL+MSSG+VLN  ++WVTFH GYDFGYL+KLLTC+ LP KQ  FF L+ VYFP VYDIKHLM 
Subjt:  FNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL+  +F GS +KY GVLYGLGVE+G  T
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRT

Q9S9P2 Probable CCR4-associated factor 1 homolog 23.7e-9864.39Show/hide
Query:  DSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQF
        D+I+IREVWN NLE+E ALI + +D F Y+AMDTEFPG+V + + A  N N      +YNY TLK NV+MLKLIQLGLT SDE GNLPTCGT+  CIWQF
Subjt:  DSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQF

Query:  NFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDIK
        NFREFN++SD+FA DSIELLR+  ID +KNNE G+D  RF ELLM SGVVLN  ++WVTFH GYDFGYLLKLL+ + LPE+   FFD +  +FPVVYDIK
Subjt:  NFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDIK

Query:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGL
        +LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  TF K++  FF GS+ KY+G L+GL
Subjt:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 65.6e-12375.28Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MS+  K DSIQIREVWNDNL+EE  LIR++VD F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTD +CIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREF++ SDIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN +V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF LINVYFP VYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+ TFRKL+  FF G + KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.3e-12476.47Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDS-FCIW
        MS+  K DSIQIREVWNDNLE E ALIRE+VD F ++AMDTEFPG+V RP+G FK   +Y+Y+TLK NV++LK+IQLGLTFSDE GNLPTCGTD+ +CIW
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDS-FCIW

Query:  QFNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYD
        QFNFREF++ SDI+A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN +V+WVTFHSGYDFGYLLKLLTC+ LPE Q GFF++I+VYFP VYD
Subjt:  QFNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+ TFRKL+  FF GS++KY+GVLYGLGVENGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-12475.28Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MS+  K DSIQIREVWNDNL+EE  LIR++VD F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTD +CIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREF++ SDIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN +V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF LINVYFP VYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+ TFRKL+  FF G + KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-12475.28Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MS+  K DSIQIREVWNDNL+EE  LIR++VD F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTD +CIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREF++ SDIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN +V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF LINVYFP VYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+ TFRKL+  FF G + KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.8e-12375.09Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ
        MS+  K DSIQIREVWNDNL+EE  LIR++VD F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTD +CIWQ
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQ

Query:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI
        FNFREF++ SDIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN +V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF LINVYFP VYDI
Subjt:  FNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVEN
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+ TFRKL+  FF G + KY+GVLYGLGVEN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVEN

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.5e-12676.47Show/hide
Query:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDS-FCIW
        MS+  K DSIQIREVWNDNLE E ALIRE+VD F ++AMDTEFPG+V RP+G FK   +Y+Y+TLK NV++LK+IQLGLTFSDE GNLPTCGTD+ +CIW
Subjt:  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDS-FCIW

Query:  QFNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYD
        QFNFREF++ SDI+A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN +V+WVTFHSGYDFGYLLKLLTC+ LPE Q GFF++I+VYFP VYD
Subjt:  QFNFREFNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+ TFRKL+  FF GS++KY+GVLYGLGVENGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-12175.75Show/hide
Query:  KGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVDKF+YIAMDTEFPGVVL+P+  FK  ND NY+TLK+NVD+LKLIQ+GLTFSDENGNLPTCGTD FCIWQFNFRE
Subjt:  KGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFRE

Query:  FNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDIKHLMK
        FNI  DI+AS+SIELLRQCGIDF+KN E+GIDV RFGEL+MSSG+VLN  ++WVTFH GYDFGYL+KLLTC+ LP KQ  FF L+ VYFP VYDIKHLM 
Subjt:  FNIVSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL+  +F GS +KY GVLYGLGVE+G  T
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTACCGAAAGGCGATTCCATTCAAATCCGTGAGGTTTGGAACGATAATTTGGAGGAGGAGTTTGCGCTAATCCGTGAGATTGTTGATAAATTTAACTACAT
AGCCATGGATACTGAGTTTCCTGGAGTGGTGCTTCGCCCGTTGGGTGCCTTCAAGAATATCAATGATTACAACTACCAGACTCTTAAGGATAATGTTGACATGTTGAAGT
TGATTCAATTGGGTCTTACGTTCTCTGACGAGAATGGAAATCTCCCGACTTGTGGAACCGATAGCTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTGTTAGT
GATATTTTTGCTAGTGATTCAATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTAAACGCAGATGTGAACTGGGTTACGTTCCACAGTGGGTATGATTTCGGTTACTTGCTGAAATTGCTCACTTGCCGAGGCTTACCAGAAAAGCAGG
ACGGATTCTTTGACCTGATCAATGTCTATTTCCCAGTGGTTTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTTCATGGTGGGCTGAACAAGCTTGCGGAGTTA
TTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTCTACTTTTAGGAAGTTAAGGAATACCTTTTTCAATGGATCTATACAGAA
ATACGCAGGTGTTTTGTATGGTCTCGGTGTTGAAAATGGACAGCGTACTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTACCGAAAGGCGATTCCATTCAAATCCGTGAGGTTTGGAACGATAATTTGGAGGAGGAGTTTGCGCTAATCCGTGAGATTGTTGATAAATTTAACTACAT
AGCCATGGATACTGAGTTTCCTGGAGTGGTGCTTCGCCCGTTGGGTGCCTTCAAGAATATCAATGATTACAACTACCAGACTCTTAAGGATAATGTTGACATGTTGAAGT
TGATTCAATTGGGTCTTACGTTCTCTGACGAGAATGGAAATCTCCCGACTTGTGGAACCGATAGCTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTGTTAGT
GATATTTTTGCTAGTGATTCAATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTCAATCGTTTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTAAACGCAGATGTGAACTGGGTTACGTTCCACAGTGGGTATGATTTCGGTTACTTGCTGAAATTGCTCACTTGCCGAGGCTTACCAGAAAAGCAGG
ACGGATTCTTTGACCTGATCAATGTCTATTTCCCAGTGGTTTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTTCATGGTGGGCTGAACAAGCTTGCGGAGTTA
TTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTCTACTTTTAGGAAGTTAAGGAATACCTTTTTCAATGGATCTATACAGAA
ATACGCAGGTGTTTTGTATGGTCTCGGTGTTGAAAATGGACAGCGTACTAATTGA
Protein sequenceShow/hide protein sequence
MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVS
DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLPEKQDGFFDLINVYFPVVYDIKHLMKFCNSLHGGLNKLAEL
LEVERIGVCHQAGSDSLLTASTFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN