; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G003600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G003600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCmo_Chr05:1630147..1630971
RNA-Seq ExpressionCmoCh05G003600
SyntenyCmoCh05G003600
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598550.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. sororia]3.4e-14999.24Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MSTFPKAESIYIREVWNHNLE EFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFF LIRTYFPMVYDV
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLY
        KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLY
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLY

XP_022962455.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]5.2e-158100Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
        KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD

XP_022996959.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima]6.5e-15396.72Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS FPKAESIYIREVWNHNLE EFALIREVVDQFNYIAMDTEFPGVVLRPVG FKNINE+NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDV RFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFF LI TYFPMVYDV
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
        KHLLKFCNS+YGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEP+TD
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD

XP_023545659.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo]6.5e-15397.08Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MSTFPKAESIYIREVWNHNLE EFALIREVVDQFNYIAMDTEFPGVVLRPVG+FKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLP CGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNI EDIYATDSIQLLRDSGIDFKKNKEEGIDV RFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILP+TQEEFF LI TYFPMVYDV
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
        KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD

XP_038886120.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]2.0e-13382.85Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS  PK ESI IREVWNHNLE EFALIRE+VDQFNYIAMDTEFPGVV+RPVG+FKNINE+NYRTLK+NVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNI EDIYA+DSI+LLR+ GIDFKK  EEGIDV RF+ELLMSSGIVLND++YWVTFHSGYDFGYLLKLLTC+ LP TQ EFF LI  YFPMVYD+
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
        KHL++FCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTACTFRKLRDTFF+GSTQKYAGVLYGLGVE   TT+
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD

TrEMBL top hitse value%identityAlignment
A0A6J1BRI8 Poly(A)-specific ribonuclease2.1e-13384.01Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS  PK ESI+IREVW+HNLE EFAL+RE+VDQFNYIAMDTEFPGVVLRPVG FKNINE+NY+TLKDNVD+L LIQLGLTFS+ENGNLPTCGTDK+CIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNI+EDI+A+DSI+LLR  GIDFKKN EEGIDV RF+ELLMSSGIVLND+V WVTFHSGYDFGYLLKLLTC+ LPDTQ  FF LI  YFPMVYD+
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN
        KHL+KFCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTACTFRKLRDTFF+GSTQKYAGVLYGLGVEN
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN

A0A6J1GJJ8 Poly(A)-specific ribonuclease1.5e-13181.02Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS  PK ESI+IREVWNHN+E EFAL+RE+VDQFNYIAMDTEFPGVV+RPVG FKNIN++NY+TLKDNVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNI+ DI+A+DSI+LLR  GIDF+KN EEGIDV  F ELLMSSGIVLND+VYWVTFHSGYDFGYLLKLLTC+ LP TQ  FF LI  YFPMVYD+
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
        KHL+KFCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTACTFRKLRDTFF+GSTQKYAGVLYGLGVE   TT+
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD

A0A6J1HF41 Poly(A)-specific ribonuclease2.5e-158100Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
        KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD

A0A6J1K881 Poly(A)-specific ribonuclease3.2e-15396.72Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS FPKAESIYIREVWNHNLE EFALIREVVDQFNYIAMDTEFPGVVLRPVG FKNINE+NYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDV RFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFF LI TYFPMVYDV
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
        KHLLKFCNS+YGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEP+TD
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD

A0A6J1KLE0 Poly(A)-specific ribonuclease1.5e-13181.02Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS  PK ESI+IREVWNHN+E EFAL+RE+VDQFNYIAMDTEFPGVV+RPVG FKNIN++NY+TLKDNVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREFNI+ DI+A+DSI+LLR  GIDF+KN EEGIDV  F ELLMSSGIVLND+VYWVTFHSGYDFGYLLKLLTC+ LP TQ  FF LI  YFPMVYD+
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD
        KHL+KFCNS +GGL+K+AE LE+ER+GVCHQAGSDSLLTACTFRKLRDTFF+GSTQKYAGVLYGLGVE   TT+
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD

SwissProt top hitse value%identityAlignment
Q08BM8 CCR4-NOT transcription complex subunit 72.5e-7856.81Show/hide
Query:  IREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITED
        I EVW  NLE E   IR+V  +FNYIAMDTEFPGVV RP+G F++  ++ Y+ L+ NVD+L +IQLGLTF  E G  P  GT     WQFNF+ FN+TED
Subjt:  IREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITED

Query:  IYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIY
        +YA DSI+LL  SGI FKK++EEGI+   F+ELLM+SG+VL + V W++FHSGYDFGYL+K+L+   LPD + +FF ++R +FP++YDVK+L+K C ++ 
Subjt:  IYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIY

Query:  GGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSG--STQKYAGVLYGLG
        GGL +VAE LE+ER+G  HQAGSDSLLT   F K+R+ FF       KY G LYGLG
Subjt:  GGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSG--STQKYAGVLYGLG

Q9LEU4 Probable CCR4-associated factor 1 homolog 101.9e-11571.64Show/hide
Query:  KAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFRE
        K +SI IREVW++NL  EFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTLK+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFRE
Subjt:  KAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFRE

Query:  FNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDVKHLLK
        FNI EDIYA++SI+LLR  GIDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q +FF L+  YFP VYD+KHL+ 
Subjt:  FNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDVKHLLK

Query:  FCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTT
        FCN ++GGL+++AE + +ERVG+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+  TT
Subjt:  FCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTT

Q9S9P2 Probable CCR4-associated factor 1 homolog 21.3e-9260.23Show/hide
Query:  ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNIN------EFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQF
        ++I IREVWNHNLE E ALI + +D F Y+AMDTEFPG+V + V    N N      E+NY TLK NV++L LIQLGLT S+E GNLPTCGT+K CIWQF
Subjt:  ESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNIN------EFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQF

Query:  NFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDVK
        NFREFN+  D++A DSI+LLR S ID +KN E G+D +RF+ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+   +FF  +  +FP+VYD+K
Subjt:  NFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDVK

Query:  HLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGL
        +L+ FC ++YGGL K+AE L ++RVG+ HQAGSDSLLT  TF K+++ FF+GS  KY+G L+GL
Subjt:  HLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.0e-11672.12Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS F K +SI IREVWN NL+ E  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  +++Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREF++  DI+A DSI+LL+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LPD+Q +FF LI  YFP VYD+
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN
        KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVEN
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN

Q9SKZ2 Probable CCR4-associated factor 1 homolog 74.9e-11974.44Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIW
        MS F K +SI IREVWN NLE+E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E++Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIW
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIW

Query:  QFNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYD
        QFNFREF++  DIYATDSI+LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP+TQ  FF +I  YFP VYD
Subjt:  QFNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYD

Query:  VKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN
        +KHL+KFCNS++GGL+K+AE L++ERVG+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVEN
Subjt:  VKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.3e-11872.12Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS F K +SI IREVWN NL+ E  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  +++Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREF++  DI+A DSI+LL+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LPD+Q +FF LI  YFP VYD+
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN
        KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVEN
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.3e-11872.12Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS F K +SI IREVWN NL+ E  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  +++Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREF++  DI+A DSI+LL+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LPD+Q +FF LI  YFP VYD+
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN
        KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVEN
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-11872.22Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ
        MS F K +SI IREVWN NL+ E  LIR+VVD F Y+AMDTEFPG+V+RPVGTFK+  +++Y TLK NV+IL +IQLGLTFS E GNLPTCGTDKYCIWQ
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ

Query:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV
        FNFREF++  DI+A DSI+LL+ SGID  KN  +GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LPD+Q +FF LI  YFP VYD+
Subjt:  FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDV

Query:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENE
        KHL+KFCNS++GGL+K+AE LE+ERVG+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENE
Subjt:  KHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENE

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.5e-12074.44Show/hide
Query:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIW
        MS F K +SI IREVWN NLE+E ALIREVVD F ++AMDTEFPG+V RPVGTFK   E++Y TLK NV+IL +IQLGLTFS+E GNLPTCGTD KYCIW
Subjt:  MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTD-KYCIW

Query:  QFNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYD
        QFNFREF++  DIYATDSI+LLR SGIDF KN E GID +RF+ELLMSSGIVLN++V+WVTFHSGYDFGYLLKLLTCQ LP+TQ  FF +I  YFP VYD
Subjt:  QFNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYD

Query:  VKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN
        +KHL+KFCNS++GGL+K+AE L++ERVG+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVEN
Subjt:  VKHLLKFCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVEN

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-11671.64Show/hide
Query:  KAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFRE
        K +SI IREVW++NL  EFALIRE+VD+F+YIAMDTEFPGVVL+PV TFK  N+ NYRTLK+NVD+L LIQ+GLTFS+ENGNLPTCGTDK+CIWQFNFRE
Subjt:  KAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFRE

Query:  FNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDVKHLLK
        FNI EDIYA++SI+LLR  GIDFKKN E+GIDV RF EL+MSSGIVLND++ WVTFH GYDFGYL+KLLTC+ LP  Q +FF L+  YFP VYD+KHL+ 
Subjt:  FNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDVKHLLK

Query:  FCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTT
        FCN ++GGL+++AE + +ERVG+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+  TT
Subjt:  FCNSIYGGLSKVAETLEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAACTTGGAGGCAGAGTTTGCTTTAATACGTGAAGTCGTCGACCAATTCAACTACAT
AGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATT
TGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAA
GATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTC
ATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAACTGTTGACTTGCCAAATCTTACCAGACACCCAGG
AGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACA
TTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAA
ATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACGTTTCCGAAAGCTGAGTCGATTTATATCCGTGAGGTGTGGAACCATAACTTGGAGGCAGAGTTTGCTTTAATACGTGAAGTCGTCGACCAATTCAACTACAT
AGCGATGGATACCGAATTCCCCGGCGTGGTTCTGCGCCCTGTGGGTACTTTTAAGAATATCAACGAGTTTAACTACCGAACCCTCAAAGACAATGTCGACATTTTGAATT
TGATTCAGTTGGGTCTTACCTTTTCCGAAGAGAATGGGAATCTTCCAACATGTGGTACCGATAAGTATTGCATTTGGCAATTCAATTTCCGCGAGTTCAACATTACTGAA
GATATTTATGCAACTGATTCGATTCAGCTTTTGCGCGACTCTGGTATTGATTTCAAGAAGAACAAAGAAGAAGGTATTGATGTCAGACGCTTCAGTGAGCTTCTCATGTC
ATCCGGGATTGTCTTAAACGATAGTGTTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAACTGTTGACTTGCCAAATCTTACCAGACACCCAGG
AGGAGTTTTTTTATTTGATCCGTACGTATTTCCCAATGGTTTATGATGTCAAGCATTTGTTGAAGTTTTGCAACAGTATCTATGGTGGGCTCAGCAAGGTTGCAGAAACA
TTAGAAATTGAGAGGGTTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACATTTTTCAGTGGATCTACACAGAA
ATATGCCGGTGTTTTATATGGTCTCGGTGTCGAAAATGAACCGACTACTGATTGA
Protein sequenceShow/hide protein sequence
MSTFPKAESIYIREVWNHNLEAEFALIREVVDQFNYIAMDTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQFNFREFNITE
DIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQILPDTQEEFFYLIRTYFPMVYDVKHLLKFCNSIYGGLSKVAET
LEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGVLYGLGVENEPTTD