; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G003740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G003740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSerine-rich protein-like protein
Genome locationCmo_Chr05:1684119..1684688
RNA-Seq ExpressionCmoCh05G003740
SyntenyCmoCh05G003740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598561.1 Protein MEMO1, partial [Cucurbita argyrosperma subsp. sororia]2.5e-9598.41Show/hide
Query:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS
        MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHN ERSASPTRVNISSGPLSRSVRFSIDHRSGS SRSIALSNRNSPVSQPKKTCTCS
Subjt:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS

Query:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
        PTTHPGSFRCSLHRNSGNGGHHQT+SSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
Subjt:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL

KAG7029499.1 hypothetical protein SDJN02_07838, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-9197.8Show/hide
Query:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS
        MKKETSGP LRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHN ERSASPTRVNISSGPLSRSVRFSIDHRSGS SRSIALSNRNSPVSQPKKTCTCS
Subjt:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS

Query:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSV
        PTTHPGSFRCSLHRNSGNGGHHQT+SSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSV
Subjt:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSV

XP_022962284.1 uncharacterized protein LOC111462780 [Cucurbita moschata]3.5e-97100Show/hide
Query:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS
        MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS
Subjt:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS

Query:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
        PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
Subjt:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL

XP_022996630.1 uncharacterized protein LOC111491813 [Cucurbita maxima]4.0e-8591.53Show/hide
Query:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS
        MKKETSGPVLRPLPAAGR        FAAS SFGFSSTSSSFFHN ER+ASPTRVNISS PLSRSVRFSIDHRSGS SRSI LSNRNSPVS PKKTCTCS
Subjt:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS

Query:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
        PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAM NSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
Subjt:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL

XP_023547160.1 uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo]3.3e-9597.88Show/hide
Query:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS
        MKKETSGPVLRPLPAAGRFHSPI+SPFAASTSFGFSSTSSSFFHN ERSASPTRVNISSGPLSRSVRFSIDHRSGS SRSIALSNRNSPVSQPKKTCTCS
Subjt:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS

Query:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
        PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVS+ADDL
Subjt:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL

TrEMBL top hitse value%identityAlignment
A0A0A0LME8 Uncharacterized protein1.8e-6775.12Show/hide
Query:  MKKETSGPVLRPLPAAGRFHSPISSP----FAASTSFGFSSTSSSFF---------HNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRN
        MKKETSGPVLRP PA  RF S  SSP    FAAST+FGFSS SS F          HN  RS SPTRVNISS PLS SVRFSI HR+GS +    LSNRN
Subjt:  MKKETSGPVLRPLPAAGRFHSPISSP----FAASTSFGFSSTSSSFF---------HNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRN

Query:  SPVSQPKKTCTCSPTTHPGSFRCSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSV
        SPVS PKK CTCSPTTHPGSFRCSLH+ SG+G H HQ     YSSSGLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRPSSHQLRRRANFRP+PSRLSV
Subjt:  SPVSQPKKTCTCSPTTHPGSFRCSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSV

Query:  VSKAD
        +SKAD
Subjt:  VSKAD

A0A1S3BC71 nuclear transcription factor Y subunit gamma-like4.4e-6976.85Show/hide
Query:  MKKETSGPVLRPLPAAGRFH----SPISSPFAASTSFGFSSTSSSFF-------HNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSP
        MKKETSGPVLRP PA GRF     SP +SPFAAST+FGFSS SS+F        HN  RSASPTRVNISS PLSRSVRFSI HRSGS      LSNRNSP
Subjt:  MKKETSGPVLRPLPAAGRFH----SPISSPFAASTSFGFSSTSSSFF-------HNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSP

Query:  VSQPKKTCTCSPTTHPGSFRCSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVS
        VS PKK C CSPTTHPGSFRCSLH+ SG+G H HQ     YSS+GLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRP+PSRLSV+S
Subjt:  VSQPKKTCTCSPTTHPGSFRCSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVS

Query:  KAD
        KA+
Subjt:  KAD

A0A5A7VCJ2 Nuclear transcription factor Y subunit gamma-like4.4e-6976.85Show/hide
Query:  MKKETSGPVLRPLPAAGRFH----SPISSPFAASTSFGFSSTSSSFF-------HNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSP
        MKKETSGPVLRP PA GRF     SP +SPFAAST+FGFSS SS+F        HN  RSASPTRVNISS PLSRSVRFSI HRSGS      LSNRNSP
Subjt:  MKKETSGPVLRPLPAAGRFH----SPISSPFAASTSFGFSSTSSSFF-------HNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSP

Query:  VSQPKKTCTCSPTTHPGSFRCSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVS
        VS PKK C CSPTTHPGSFRCSLH+ SG+G H HQ     YSS+GLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRP+PSRLSV+S
Subjt:  VSQPKKTCTCSPTTHPGSFRCSLHRNSGNGGH-HQ----TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVS

Query:  KAD
        KA+
Subjt:  KAD

A0A6J1HGM5 uncharacterized protein LOC1114627801.7e-97100Show/hide
Query:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS
        MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS
Subjt:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS

Query:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
        PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
Subjt:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL

A0A6J1K7C8 uncharacterized protein LOC1114918131.9e-8591.53Show/hide
Query:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS
        MKKETSGPVLRPLPAAGR        FAAS SFGFSSTSSSFFHN ER+ASPTRVNISS PLSRSVRFSIDHRSGS SRSI LSNRNSPVS PKKTCTCS
Subjt:  MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCS

Query:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
        PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAM NSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
Subjt:  PTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13227.1 serine-rich protein-related4.9e-0433.33Show/hide
Query:  TRVNISSGPLSRSVRFSIDHR----SGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFRCSLH-RNSGNGGHHQTYSSSGLNMRRSAMTNS
        T  ++S   + R   +++  R     G    S+ +S  +S     ++ C C+PTTHPGSFRC  H RN+G G    T   S L+M     +NS
Subjt:  TRVNISSGPLSRSVRFSIDHR----SGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFRCSLH-RNSGNGGHHQTYSSSGLNMRRSAMTNS

AT5G11090.1 serine-rich protein-related1.4e-4855.24Show/hide
Query:  KKETSGPVLRPLPAAGRF--------HSPISSPFAASTSFGFSSTSSSFF---------HNRERSASPTRVNI-SSGPLSRSVRFSIDHRSGS-TSRSIA
        + +++GPVLR    +GRF         S  SS FA+STS  FSS SS+FF         H+  RSASPTRVN+ ++ P+S+S R+S+D RS S T++SI+
Subjt:  KKETSGPVLRPLPAAGRF--------HSPISSPFAASTSFGFSSTSSSFF---------HNRERSASPTRVNI-SSGPLSRSVRFSIDHRSGS-TSRSIA

Query:  LSNRNSPVSQPK--KTCTCSPTTHPGSFRCSLHRNSGN--GGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPS
        +S    P    K  + C CSPTTHPGSFRCSLH+N  N  G    +Y+++GLNMRRSAMTNSLVRIGGVEG+WV+RALT LIRPSSH L+RRA ++PRPS
Subjt:  LSNRNSPVSQPK--KTCTCSPTTHPGSFRCSLHRNSGN--GGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPS

Query:  RLSVVSKADD
        RLS+++KAD+
Subjt:  RLSVVSKADD

AT5G20370.1 serine-rich protein-related2.7e-1534.03Show/hide
Query:  TSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTH
        +S  VLRPL ++ R H                  ++   H+R+RS SP   N+       ++R            S+   + N    Q K+ C CSPTTH
Subjt:  TSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTH

Query:  PGSFRCSLHR---------------NSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTA-LIRPSSHQLRRRANFRPRPSR
        PGSFRCS HR                  N G +    + GLN+R+ A+ NSL +IG VE +  +R+L A L +PSS    RR  FRPR SR
Subjt:  PGSFRCSLHR---------------NSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTA-LIRPSSHQLRRRANFRPRPSR

AT5G25280.1 serine-rich protein-related1.2e-4759.78Show/hide
Query:  SPISSPFAASTSFGFSSTSSSFF-------HNRERSASPTRVNI-SSGPLSRSVRFSIDHRSGSTSRSIALSNRNSP-----VSQPKKTCTCSPTTHPGS
        SP SS FA+STS  FSS S++FF       H++ RSASPTRVN+ +S P+++S R+SID+RS S +RSIA+S+ N P     +   ++ C CSPTTHPGS
Subjt:  SPISSPFAASTSFGFSSTSSSFF-------HNRERSASPTRVNI-SSGPLSRSVRFSIDHRSGSTSRSIALSNRNSP-----VSQPKKTCTCSPTTHPGS

Query:  FRCSLHRNSGN--GGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
        FRCSLH+N  N  G    +Y+++GLNMRRSAMTNSLVRIGGVEG+WV+RALT LIRPSSHQL+RR+ + PR SRL+ +SKA+DL
Subjt:  FRCSLHRNSGN--GGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL

AT5G25280.2 serine-rich protein-related1.2e-4759.78Show/hide
Query:  SPISSPFAASTSFGFSSTSSSFF-------HNRERSASPTRVNI-SSGPLSRSVRFSIDHRSGSTSRSIALSNRNSP-----VSQPKKTCTCSPTTHPGS
        SP SS FA+STS  FSS S++FF       H++ RSASPTRVN+ +S P+++S R+SID+RS S +RSIA+S+ N P     +   ++ C CSPTTHPGS
Subjt:  SPISSPFAASTSFGFSSTSSSFF-------HNRERSASPTRVNI-SSGPLSRSVRFSIDHRSGSTSRSIALSNRNSP-----VSQPKKTCTCSPTTHPGS

Query:  FRCSLHRNSGN--GGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL
        FRCSLH+N  N  G    +Y+++GLNMRRSAMTNSLVRIGGVEG+WV+RALT LIRPSSHQL+RR+ + PR SRL+ +SKA+DL
Subjt:  FRCSLHRNSGN--GGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGGAAACAAGCGGACCTGTTCTCCGGCCACTTCCCGCCGCCGGCCGATTTCACTCTCCGATCTCTTCTCCGTTCGCCGCGTCAACGAGCTTCGGATTCTCTTC
CACTTCCTCATCCTTTTTTCACAACCGCGAGCGATCCGCTTCTCCTACTCGAGTCAACATTTCTTCCGGTCCCCTGTCTCGCTCGGTTCGATTTTCAATCGATCACCGGT
CCGGTTCGACGAGTCGGTCCATCGCACTCTCCAACCGGAACTCGCCGGTTTCTCAACCGAAAAAGACGTGCACTTGTTCGCCAACGACTCACCCCGGTTCCTTCCGGTGC
AGTCTGCATAGAAATTCAGGCAATGGCGGACACCATCAGACGTATTCATCGAGCGGGTTAAACATGCGGAGGTCTGCGATGACGAACTCGCTCGTGAGAATCGGCGGCGT
TGAGGGAGACTGGGTGAAGCGAGCGTTGACTGCTTTGATACGACCTTCTTCACACCAGCTGAGACGGCGAGCCAATTTCCGGCCACGCCCCAGCCGTCTTTCGGTCGTGT
CCAAGGCCGATGATCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGGAAACAAGCGGACCTGTTCTCCGGCCACTTCCCGCCGCCGGCCGATTTCACTCTCCGATCTCTTCTCCGTTCGCCGCGTCAACGAGCTTCGGATTCTCTTC
CACTTCCTCATCCTTTTTTCACAACCGCGAGCGATCCGCTTCTCCTACTCGAGTCAACATTTCTTCCGGTCCCCTGTCTCGCTCGGTTCGATTTTCAATCGATCACCGGT
CCGGTTCGACGAGTCGGTCCATCGCACTCTCCAACCGGAACTCGCCGGTTTCTCAACCGAAAAAGACGTGCACTTGTTCGCCAACGACTCACCCCGGTTCCTTCCGGTGC
AGTCTGCATAGAAATTCAGGCAATGGCGGACACCATCAGACGTATTCATCGAGCGGGTTAAACATGCGGAGGTCTGCGATGACGAACTCGCTCGTGAGAATCGGCGGCGT
TGAGGGAGACTGGGTGAAGCGAGCGTTGACTGCTTTGATACGACCTTCTTCACACCAGCTGAGACGGCGAGCCAATTTCCGGCCACGCCCCAGCCGTCTTTCGGTCGTGT
CCAAGGCCGATGATCTGTAA
Protein sequenceShow/hide protein sequence
MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFRC
SLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL