; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G004000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G004000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationCmo_Chr05:1810114..1811535
RNA-Seq ExpressionCmoCh05G004000
SyntenyCmoCh05G004000
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022932942.1 UPF0481 protein At3g47200-like [Cucurbita moschata]2.8e-4755.81Show/hide
Query:  KKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIN
        K+    +PP    L + GVTIKKA +AK +M++SFKN VF+IPP+ IDD FETM+RNLIAFE   +  +NKCIQY++ +D+LI TE+DV++L  AGIIIN
Subjt:  KKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIN

Query:  DIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        +IGGS+ EV++LFN+LCKF T+P+  +FN I+ +L EHC++RWN A A LK +YF TPW  V+  GA+ LL+
Subjt:  DIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

XP_022932991.1 UPF0481 protein At3g47200-like [Cucurbita moschata]5.2e-4655.23Show/hide
Query:  KKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIN
        K+    +PP    L + GVTIKKA +   +M++SFKN VF+IPP+ IDD FETM+RNLIAFE   +  +NKCIQY++ +++LI TE+DV+LL  AGII+N
Subjt:  KKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIN

Query:  DIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        +IGGS  EV+++FN+LCKF TVP+  +FN I+ SL EHCN+RWN A A LK +YF TPWA V+  G + LL+
Subjt:  DIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

XP_022961906.1 putative UPF0481 protein At3g02645 [Cucurbita moschata]1.8e-7077.09Show/hide
Query:  GNLVISIKKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLE
        G+ V++I +    +PP    L Q GVTIKKA D KFVMDISF+N +FKIPPL IDDNFETMIRNLIAFEQISLAKE+KCIQYITFMDYLISTEEDVNLLE
Subjt:  GNLVISIKKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLE

Query:  NAGIIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        NAGIIINDIGGSA EV+KLFNDLCKF TVP DT+FN ISA+L E CN+RWNS KA LKRDYFYTPWA VAAFGA+S+++
Subjt:  NAGIIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

XP_022962574.1 putative UPF0481 protein At3g02645 [Cucurbita moschata]1.1e-8398.11Show/hide
Query:  LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLF
        LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLF
Subjt:  LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLF

Query:  NDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        NDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVS+++
Subjt:  NDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

XP_022996816.1 putative UPF0481 protein At3g02645 [Cucurbita maxima]2.2e-7380.11Show/hide
Query:  VISIKKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAG
        VI+I +    +PP    L Q G+ IKKA DAKFVMD+SFKN VFKIPPL IDDNFETMIRNLIAFEQISLAKE+KC QYITFMDYLISTEEDVNLLENAG
Subjt:  VISIKKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAG

Query:  IIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        IIINDIGGSA EV+KLFNDLCKFATVP+DT+FN ISA L+EHCN+RWN+AKAILKRDYFYTPWACVAAFGA+S+++
Subjt:  IIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

TrEMBL top hitse value%identityAlignment
A0A6J1EXW9 UPF0481 protein At3g47200-like2.5e-4655.23Show/hide
Query:  KKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIN
        K+    +PP    L + GVTIKKA +   +M++SFKN VF+IPP+ IDD FETM+RNLIAFE   +  +NKCIQY++ +++LI TE+DV+LL  AGII+N
Subjt:  KKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIN

Query:  DIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        +IGGS  EV+++FN+LCKF TVP+  +FN I+ SL EHCN+RWN A A LK +YF TPWA V+  G + LL+
Subjt:  DIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

A0A6J1EY59 UPF0481 protein At3g47200-like1.3e-4755.81Show/hide
Query:  KKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIN
        K+    +PP    L + GVTIKKA +AK +M++SFKN VF+IPP+ IDD FETM+RNLIAFE   +  +NKCIQY++ +D+LI TE+DV++L  AGIIIN
Subjt:  KKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIN

Query:  DIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        +IGGS+ EV++LFN+LCKF T+P+  +FN I+ +L EHC++RWN A A LK +YF TPW  V+  GA+ LL+
Subjt:  DIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

A0A6J1HBM9 putative UPF0481 protein At3g026458.6e-7177.09Show/hide
Query:  GNLVISIKKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLE
        G+ V++I +    +PP    L Q GVTIKKA D KFVMDISF+N +FKIPPL IDDNFETMIRNLIAFEQISLAKE+KCIQYITFMDYLISTEEDVNLLE
Subjt:  GNLVISIKKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLE

Query:  NAGIIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        NAGIIINDIGGSA EV+KLFNDLCKF TVP DT+FN ISA+L E CN+RWNS KA LKRDYFYTPWA VAAFGA+S+++
Subjt:  NAGIIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

A0A6J1HHH2 putative UPF0481 protein At3g026455.2e-8498.11Show/hide
Query:  LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLF
        LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLF
Subjt:  LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLF

Query:  NDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        NDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVS+++
Subjt:  NDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

A0A6J1K5T7 putative UPF0481 protein At3g026451.1e-7380.11Show/hide
Query:  VISIKKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAG
        VI+I +    +PP    L Q G+ IKKA DAKFVMD+SFKN VFKIPPL IDDNFETMIRNLIAFEQISLAKE+KC QYITFMDYLISTEEDVNLLENAG
Subjt:  VISIKKRMEQLPP----LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAG

Query:  IIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        IIINDIGGSA EV+KLFNDLCKFATVP+DT+FN ISA L+EHCN+RWN+AKAILKRDYFYTPWACVAAFGA+S+++
Subjt:  IIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

SwissProt top hitse value%identityAlignment
P0C897 Putative UPF0481 protein At3g026455.3e-0927.07Show/hide
Query:  FKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHC
        F +P + +D N ET++RNL+A+E  + +      +Y   ++ +I +EEDV LL   G++++ +  S  E A+++N + K   +    + +     ++ + 
Subjt:  FKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHC

Query:  NKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
          RW      L   Y Y  W  +A   AV LL+
Subjt:  NKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

Q9SD53 UPF0481 protein At3g472001.2e-1329.86Show/hide
Query:  VMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATVPHDT-YF
        ++++  K    +IP L  D    +   N +AFEQ      N+   YI FM  L++ EEDV  L N  +II +  GS NEV++ F  + K      DT Y 
Subjt:  VMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATVPHDT-YF

Query:  NIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        N +   ++E+  K +N   A  +  +F +PW  +++   + ++L
Subjt:  NIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

Arabidopsis top hitse value%identityAlignment
AT3G50130.1 Plant protein of unknown function (DUF247)7.8e-2439.53Show/hide
Query:  KRMEQL----PPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIND
        KR +QL      L + G+  +     +F  DI FKN   +IP L I D  +++  NLIAFEQ  +   N    YI FMD LI + EDV  L   GII + 
Subjt:  KRMEQL----PPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIIND

Query:  IGGSANEVAKLFNDLC-KFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        +G    EVA LFN LC + A  P ++Y + +S  +  + +++WN  KAILK  YF  PWA  + F A+ LL+
Subjt:  IGGSANEVAKLFNDLC-KFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

AT3G50150.1 Plant protein of unknown function (DUF247)6.0e-2443.97Show/hide
Query:  DISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATV-PHDTYFNI
        DI FKN   KIP L I D  +++  NLIAFEQ      N    YI FMD LI++ +DV+ L + GII + + GS +EVA LFN LCK     P D Y + 
Subjt:  DISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATV-PHDTYFNI

Query:  ISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLL
        +S  ++ + +++WNS KA L++ YF  PWA  +   AV LL
Subjt:  ISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLL

AT3G50160.1 Plant protein of unknown function (DUF247)2.3e-2338.51Show/hide
Query:  IKKRMEQL----PPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIII
        + K+ +QL      L   GV   +     F  DI FKN   KIP L I D  +++  NLIAFEQ  +    K   YI FMD LI++ EDV+ L + GII 
Subjt:  IKKRMEQL----PPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIII

Query:  NDIGGSANEVAKLFNDLCKFATV-PHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        N + GS +EV+ LFN L K     P+D Y + ++  ++ +  ++WN  KA L+  YF  PWA  +   AV+LL+
Subjt:  NDIGGSANEVAKLFNDLCKFATV-PHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

AT3G50170.1 Plant protein of unknown function (DUF247)3.2e-2540.23Show/hide
Query:  IKKRMEQL----PPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIII
        + KR +QL      L + GV  +K    +F  DI FKN   +IP L I D  +++  NLIAFEQ  +   N    YI FMD LI++ EDV+ L   GII 
Subjt:  IKKRMEQL----PPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIII

Query:  NDIGGSANEVAKLFNDLCKFATV-PHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        + + GS +EVA LFN LC+     P D++ + +S  ++ + N++WN  KA L   YF  PWA  +   AV LLL
Subjt:  NDIGGSANEVAKLFNDLCKFATV-PHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL

AT4G31980.1 unknown protein2.6e-2739.62Show/hide
Query:  LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLF
        L   GV  K A  +  ++DISF + V KIP + +DD  E++ +N+I FEQ   + +N  + YI  +   I +  D +LL ++GII+N +G S  +V+ LF
Subjt:  LSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQYITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLF

Query:  NDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL
        N + K        YF+++S +L  +CN  WN  KAIL+RDYF+ PWA  + F A+ LLL
Subjt:  NDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGGTCAGATTGGAGTTCATCAAGCAAATGACATATCATACATTATGACAGAAATTAGTGAAGTTGAACAACTTTGTGGTAATCTTGTAATATCCATA
AAAAAAAGGATGGAACAATTACCTCCGCTCTCTCAAGTTGGCGTCACCATCAAGAAAGCAGGAGATGCCAAATTTGTGATGGACATAAGCTTTAAAAATGAGGTT
TTCAAAATTCCACCTTTAGGGATTGATGATAACTTTGAAACCATGATTCGAAACTTGATAGCATTTGAGCAAATTTCCTTAGCAAAGGAGAACAAGTGTATCCAA
TATATCACATTCATGGATTATTTGATAAGCACAGAGGAAGACGTGAATTTACTTGAGAATGCCGGAATTATAATCAACGATATTGGAGGCAGTGCTAATGAAGTT
GCAAAACTGTTTAACGATCTCTGTAAATTTGCCACAGTCCCACATGATACCTACTTCAACATTATCAGTGCTAGCTTACATGAGCACTGCAATAAACGTTGGAAC
AGCGCGAAAGCTATACTCAAACGTGACTATTTTTATACACCATGGGCTTGTGTCGCTGCTTTTGGTGCTGTCTCGTTGCTCCTTACCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGGTCAGATTGGAGTTCATCAAGCAAATGACATATCATACATTATGACAGAAATTAGTGAAGTTGAACAACTTTGTGGTAATCTTGTAATATCCATA
AAAAAAAGGATGGAACAATTACCTCCGCTCTCTCAAGTTGGCGTCACCATCAAGAAAGCAGGAGATGCCAAATTTGTGATGGACATAAGCTTTAAAAATGAGGTT
TTCAAAATTCCACCTTTAGGGATTGATGATAACTTTGAAACCATGATTCGAAACTTGATAGCATTTGAGCAAATTTCCTTAGCAAAGGAGAACAAGTGTATCCAA
TATATCACATTCATGGATTATTTGATAAGCACAGAGGAAGACGTGAATTTACTTGAGAATGCCGGAATTATAATCAACGATATTGGAGGCAGTGCTAATGAAGTT
GCAAAACTGTTTAACGATCTCTGTAAATTTGCCACAGTCCCACATGATACCTACTTCAACATTATCAGTGCTAGCTTACATGAGCACTGCAATAAACGTTGGAAC
AGCGCGAAAGCTATACTCAAACGTGACTATTTTTATACACCATGGGCTTGTGTCGCTGCTTTTGGTGCTGTCTCGTTGCTCCTTACCTTGTAA
Protein sequenceShow/hide protein sequence
MENGQIGVHQANDISYIMTEISEVEQLCGNLVISIKKRMEQLPPLSQVGVTIKKAGDAKFVMDISFKNEVFKIPPLGIDDNFETMIRNLIAFEQISLAKENKCIQ
YITFMDYLISTEEDVNLLENAGIIINDIGGSANEVAKLFNDLCKFATVPHDTYFNIISASLHEHCNKRWNSAKAILKRDYFYTPWACVAAFGAVSLLLTL