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CmoCh05G004330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G004330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAnkyrin repeat-containing protein-like
Genome locationCmo_Chr05:2027545..2028069
RNA-Seq ExpressionCmoCh05G004330
SyntenyCmoCh05G004330
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064719.1 ankyrin repeat-containing protein-like [Cucumis melo var. makuwa]5.1e-4266.9Show/hide
Query:  MVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-LTVWTSFMYFTMGTAIASMVVAYWS
        MVATTFIAAMAFQAGTNPPGGVWQ+D     EAGKSIMATKSPS F++FMSG+TVCFACS +Q +VLL KS E+  +V  SF+YFTMG+ I+++VVAYWS
Subjt:  MVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-LTVWTSFMYFTMGTAIASMVVAYWS

Query:  SVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS
        ++KALTP+ QMS +IVML  +L  SVV LP+++YI +KR++S
Subjt:  SVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS

KAE8647228.1 hypothetical protein Csa_018955 [Cucumis sativus]4.3e-2545.35Show/hide
Query:  STAIQMELGNENNKE-DEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL
        +T + ++  +EN K+ +EK       G+ DF+MV  TFIAA+AFQ G NPPG VWQEDK     AGKSIMA+KSPS++  FM+G+T+C   S++QL V+L
Subjt:  STAIQMELGNENNKE-DEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL

Query:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVR
         + + +  +V    MY  M   IA M+V++W+SVKALTPD + MS I   +   LG  ++ LP+ L  Y+V+
Subjt:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVR

XP_004144204.1 uncharacterized protein LOC101208403 [Cucumis sativus]4.3e-2545.35Show/hide
Query:  STAIQMELGNENNKE-DEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL
        +T + ++  +EN K+ +EK       G+ DF+MV  TFIAA+AFQ G NPPG VWQEDK     AGKSIMA+KSPS++  FM+G+T+C   S++QL V+L
Subjt:  STAIQMELGNENNKE-DEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL

Query:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVR
         + + +  +V    MY  M   IA M+V++W+SVKALTPD + MS I   +   LG  ++ LP+ L  Y+V+
Subjt:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVR

XP_008445521.1 PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo]1.3e-2444.51Show/hide
Query:  STAIQMELGNENNKEDEKKKKK-NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL
        +T + ++   EN K+ E+        G+ DF+M+  TFIAA+AFQ GTNPPG VWQEDK     AGKSIMA+KSPS++  FM+G+T+C + S++QL V+L
Subjt:  STAIQMELGNENNKEDEKKKKK-NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL

Query:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVRK
         + + +  +V    MY  M   IA M+ ++W+SVKALTPD + MS I   +  S G  ++ LPL L  Y+++K
Subjt:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVRK

XP_016899921.1 PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo]3.1e-4765.06Show/hide
Query:  NENNKEDEKKKKK--NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-L
        NE +KE++KKKKK      +RDFLMVATTFIAAMAFQAGTNPPGGVWQ+D     EAGKSIMATKSPS F++FMSG+TVCFACS +Q +VLL KS E+  
Subjt:  NENNKEDEKKKKK--NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-L

Query:  TVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS
        +V  SF+YFTMG+ I+++VVAYWS++KALTP+ QMS +IVML  +L  SVV LP+++YI +KR++S
Subjt:  TVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS

TrEMBL top hitse value%identityAlignment
A0A0A0KGU1 PGG domain-containing protein2.2e-2243.93Show/hide
Query:  STAIQMELGNENNKEDEKKKKKNT--TGERDFLMVATTFIAAMAFQAGTNPPGGVWQE-DKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMV
        S AI ++  ++   E  K    N     + DFLMV TTFIA +AFQ GTNPPGGVWQE DK  +  AGKSIMATKSPS F+ F+  +T CF  S +Q  V
Subjt:  STAIQMELGNENNKEDEKKKKKNT--TGERDFLMVATTFIAAMAFQAGTNPPGGVWQE-DKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMV

Query:  LLMKSHERLTVWTSF----MYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVS-LGFSVVGLPLALYI
        L +K         SF    +Y TMG A++SM  AY  SV+A TPD++ +++ V+  ++ LGF +    +++Y+
Subjt:  LLMKSHERLTVWTSF----MYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVS-LGFSVVGLPLALYI

A0A0A0KIL3 PGG domain-containing protein2.1e-2545.35Show/hide
Query:  STAIQMELGNENNKE-DEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL
        +T + ++  +EN K+ +EK       G+ DF+MV  TFIAA+AFQ G NPPG VWQEDK     AGKSIMA+KSPS++  FM+G+T+C   S++QL V+L
Subjt:  STAIQMELGNENNKE-DEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL

Query:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVR
         + + +  +V    MY  M   IA M+V++W+SVKALTPD + MS I   +   LG  ++ LP+ L  Y+V+
Subjt:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVR

A0A1S3BCY4 uncharacterized protein LOC1034885126.1e-2544.51Show/hide
Query:  STAIQMELGNENNKEDEKKKKK-NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL
        +T + ++   EN K+ E+        G+ DF+M+  TFIAA+AFQ GTNPPG VWQEDK     AGKSIMA+KSPS++  FM+G+T+C + S++QL V+L
Subjt:  STAIQMELGNENNKEDEKKKKK-NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLL

Query:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVRK
         + + +  +V    MY  M   IA M+ ++W+SVKALTPD + MS I   +  S G  ++ LPL L  Y+++K
Subjt:  MKSH-ERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVRK

A0A1S4DVA8 uncharacterized protein LOC1079907051.5e-4765.06Show/hide
Query:  NENNKEDEKKKKK--NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-L
        NE +KE++KKKKK      +RDFLMVATTFIAAMAFQAGTNPPGGVWQ+D     EAGKSIMATKSPS F++FMSG+TVCFACS +Q +VLL KS E+  
Subjt:  NENNKEDEKKKKK--NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-L

Query:  TVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS
        +V  SF+YFTMG+ I+++VVAYWS++KALTP+ QMS +IVML  +L  SVV LP+++YI +KR++S
Subjt:  TVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS

A0A5D3BRK9 Ankyrin repeat-containing protein-like2.5e-4266.9Show/hide
Query:  MVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-LTVWTSFMYFTMGTAIASMVVAYWS
        MVATTFIAAMAFQAGTNPPGGVWQ+D     EAGKSIMATKSPS F++FMSG+TVCFACS +Q +VLL KS E+  +V  SF+YFTMG+ I+++VVAYWS
Subjt:  MVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-LTVWTSFMYFTMGTAIASMVVAYWS

Query:  SVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS
        ++KALTP+ QMS +IVML  +L  SVV LP+++YI +KR++S
Subjt:  SVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13950.1 unknown protein4.5e-0427.15Show/hide
Query:  RDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPK-----------ELEAGKSIMATKSPSQ--FLNFMSGMTVCFACSVLQLMVLLMKSHERLTVWTSFMY
        R  LMV  T IA M+FQ   NPPGGVWQ D              +  AG +++  +S  +  ++  +   TV F+ S+  +++++     R  +  + + 
Subjt:  RDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPK-----------ELEAGKSIMATKSPSQ--FLNFMSGMTVCFACSVLQLMVLLMKSHERLTVWTSFMY

Query:  FTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYI
          M  A+  +  A++ ++  +  D Q+   I+++ V  GF VV   L L I
Subjt:  FTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCACGGCCATACAAATGGAGCTTGGAAATGAAAACAATAAAGAAGATGAGAAGAAGAAGAAGAAGAACACCACCGGGGAAAGGGATTTTCTAATGGTAGCAAC
AACGTTCATTGCAGCCATGGCTTTCCAAGCTGGGACCAACCCTCCCGGCGGCGTCTGGCAAGAAGACAAACCCAAAGAGTTAGAAGCAGGCAAATCCATCATGGCTACAA
AATCCCCCTCTCAATTCCTCAATTTCATGAGCGGCATGACCGTGTGTTTTGCATGTTCAGTGCTGCAGCTCATGGTGTTGCTCATGAAGTCCCATGAACGTTTGACGGTT
TGGACGAGCTTCATGTACTTCACGATGGGAACCGCGATAGCATCCATGGTTGTGGCTTATTGGTCCTCTGTAAAAGCTTTGACACCCGACACGCAGATGTCCAGTATCAT
CGTTATGCTCTCTGTTTCTCTTGGATTCTCCGTTGTGGGACTCCCACTTGCATTGTATATTGTACGGAAGAGAGTTTCATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGCACGGCCATACAAATGGAGCTTGGAAATGAAAACAATAAAGAAGATGAGAAGAAGAAGAAGAAGAACACCACCGGGGAAAGGGATTTTCTAATGGTAGCAAC
AACGTTCATTGCAGCCATGGCTTTCCAAGCTGGGACCAACCCTCCCGGCGGCGTCTGGCAAGAAGACAAACCCAAAGAGTTAGAAGCAGGCAAATCCATCATGGCTACAA
AATCCCCCTCTCAATTCCTCAATTTCATGAGCGGCATGACCGTGTGTTTTGCATGTTCAGTGCTGCAGCTCATGGTGTTGCTCATGAAGTCCCATGAACGTTTGACGGTT
TGGACGAGCTTCATGTACTTCACGATGGGAACCGCGATAGCATCCATGGTTGTGGCTTATTGGTCCTCTGTAAAAGCTTTGACACCCGACACGCAGATGTCCAGTATCAT
CGTTATGCTCTCTGTTTCTCTTGGATTCTCCGTTGTGGGACTCCCACTTGCATTGTATATTGTACGGAAGAGAGTTTCATCTTAA
Protein sequenceShow/hide protein sequence
MSSTAIQMELGNENNKEDEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHERLTV
WTSFMYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS