; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G004970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G004970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description3'-5' exoribonuclease 1-like
Genome locationCmo_Chr05:2385810..2396992
RNA-Seq ExpressionCmoCh05G004970
SyntenyCmoCh05G004970
Gene Ontology termsGO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146778.1 3'-5' exoribonuclease 1 [Cucumis sativus]5.1e-23491.33Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNG+PFSLQHSGNSADGFQELTDEISCH +NDIPETNH L NNFIERPNEFHNKPAYQHNS SW A HF+SQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSAS+CQFYSLPVENRFQYFPFKMFE NY CD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQ LSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
        CGLDDAKNTARLLAL+MH+GFRFSITNSLMWQT+DCP QWKQSP  +T  PQPPMKPKP+H+PI+QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWA+P
Subjt:  ATKGARCHYFEWASP

XP_008445374.1 PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis melo]1.0e-23491.57Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNG+PFSLQHSGNSADGFQELTDEISCH +NDIPETNH L NNFIERPNEFHNKPAYQHNS SW A HF+SQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSAS+CQFYSLPVENRFQYFPFKMFE NY CD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQ LSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
        CGLDDAKNTARLLAL+MH+GFRFSITNSLMWQT+DCP QWKQSP  +T  PQPPMKPKP+H+PI+QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

XP_022962079.1 uncharacterized protein LOC111462643 [Cucurbita moschata]6.9e-255100Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
        CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

XP_022997162.1 3'-5' exoribonuclease 1-like [Cucurbita maxima]1.1e-25299.28Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQA HFDSQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
        CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSP AMTL PQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

XP_023546233.1 uncharacterized protein LOC111805389 [Cucurbita pepo subsp. pepo]8.4e-25399.04Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQE++DEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQA HFDSQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSASECQFYSLPVENRFQY PFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
        CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

TrEMBL top hitse value%identityAlignment
A0A0A0KDW9 Exonuclease domain-containing protein2.5e-23491.33Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNG+PFSLQHSGNSADGFQELTDEISCH +NDIPETNH L NNFIERPNEFHNKPAYQHNS SW A HF+SQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSAS+CQFYSLPVENRFQYFPFKMFE NY CD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQ LSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
        CGLDDAKNTARLLAL+MH+GFRFSITNSLMWQT+DCP QWKQSP  +T  PQPPMKPKP+H+PI+QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWA+P
Subjt:  ATKGARCHYFEWASP

A0A1S3BCJ6 3'-5' exoribonuclease 1-like5.0e-23591.57Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNG+PFSLQHSGNSADGFQELTDEISCH +NDIPETNH L NNFIERPNEFHNKPAYQHNS SW A HF+SQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSAS+CQFYSLPVENRFQYFPFKMFE NY CD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQ LSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEK+GIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
        CGLDDAKNTARLLAL+MH+GFRFSITNSLMWQT+DCP QWKQSP  +T  PQPPMKPKP+H+PI+QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

A0A6J1GI48 3'-5' exoribonuclease 1-like isoform X28.0e-23391.11Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNG+PFSLQHSGNS DGFQE TDEISC+  NDIPETNH L NNFIERPNEFHNKPAYQHNSGSW A HFDSQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSASECQFYSLPVENRF Y PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKD+NPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKN NFAVVTWSNWDCRVMLESECRFKKIRKP YFNRWINLK+PF EVFGG +CNLKEAVEMAGL+WQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQS-PGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNW
        CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQ  PG +T  PQPP+K KP+H+PI  Y+PYC CGVRSSRGMVRKPGPKQGS FFGCGNW
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQS-PGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNW

Query:  TATKGARCHYFEWASP
        TATKGARCHYF+WASP
Subjt:  TATKGARCHYFEWASP

A0A6J1HFU9 uncharacterized protein LOC1114626433.3e-255100Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
        CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

A0A6J1K486 3'-5' exoribonuclease 1-like5.3e-25399.28Show/hide
Query:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ
        MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQA HFDSQKVQQCQ
Subjt:  MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQ

Query:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
        MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT
Subjt:  MSASECQFYSLPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLT

Query:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
        GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH
Subjt:  GIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAH

Query:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
        CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSP AMTL PQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT
Subjt:  CGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWT

Query:  ATKGARCHYFEWASP
        ATKGARCHYFEWASP
Subjt:  ATKGARCHYFEWASP

SwissProt top hitse value%identityAlignment
A6QLH5 ERI1 exoribonuclease 35.1e-3540.51Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNTN
        Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+ K+G+   N  
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNTN

Query:  FAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCN-LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSITN
           VT  +WD +VML  +C++  +    YF +WINLK  +    G    N L +  +   L   GR H G+DD KN A ++  L +RGF F  T+
Subjt:  FAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCN-LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSITN

A8K979 ERI1 exoribonuclease 29.0e-4041.71Show/hide
Query:  QEFQYFVVIDFEATCDKD-RNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK-KGIKNTN
        Q F Y +VIDFE+TC  D ++ H QEIIEFP+V++++ TGQ+++ FQ YV+P  + +LS+FC +LTGI+Q QVD GV L   L +  KW+ K +  KN  
Subjt:  QEFQYFVVIDFEATCDKD-RNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK-KGIKNTN

Query:  FAV---------------VTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH
        FA                VTWS+WD  V LE EC+ K++ KP + N WI+L+  ++  +      L  A++  G+ + GR H GLDD++NTA L   ++ 
Subjt:  FAV---------------VTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH

Query:  RGFRFSITNSL
         G    IT SL
Subjt:  RGFRFSITNSL

O43414 ERI1 exoribonuclease 35.1e-3540.51Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNTN
        Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+ K+G+   N  
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNTN

Query:  FAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCN-LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSITN
           VT  +WD +VML  +C++  +    YF +WINLK  +    G    N L +  +   L   GR H G+DD KN A ++  L +RGF F  T+
Subjt:  FAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCN-LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSITN

Q5BKS4 ERI1 exoribonuclease 27.6e-3940.19Show/hide
Query:  RRLQEFQYFVVIDFEATCDKDRNPHPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKN
        R  Q + Y +V+DFE+TC  D   H   EIIEFP+V++++ TG++E+ F  YV+P  + +LS+FC +LTGI+Q+QVD GV L   L +  KW+ K   + 
Subjt:  RRLQEFQYFVVIDFEATCDKDRNPHPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKN

Query:  T-NFAV---------------VTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL
        T +FA                VTWS+WD  V LE ECR K++ KP + N WI+L+  +R  +      L  A++  G+ + GR H GLDD++NTA L   
Subjt:  T-NFAV---------------VTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL

Query:  LMHRGFRFSITNSL
        ++  G    IT SL
Subjt:  LMHRGFRFSITNSL

Q5HZL1 ERI1 exoribonuclease 21.5e-3940.95Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK----KGI--
        Q F+Y ++IDFE+TC KD     QEIIEFP+V+++   G++E+ F TYV+P  + +LSDFC +LTGI Q QVD GV L   L + + W++K    KGI  
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK----KGI--

Query:  ----------KNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR
                  ++   A VTWS+WD  V L  ECR K+++KP   N WI+L+  ++  +      L  A++  G+ + GR H GLDD++NTA+L + ++  
Subjt:  ----------KNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR

Query:  GFRFSITNSL
        G    IT SL
Subjt:  GFRFSITNSL

Arabidopsis top hitse value%identityAlignment
AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.6e-2127.67Show/hide
Query:  RRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLSDFCRDL---TGIQQIQVDRGVTLNEALLRHDKWLEKK
        ++ QEF +F+VID E            EI+EFP +IV + T ++   F  +VRPT    Q ++ +        G+ ++  D  +   + +   + WL + 
Subjt:  RRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLSDFCRDL---TGIQQIQVDRGVTLNEALLRHDKWLEKK

Query:  GI--KNTNF-----AVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRG
         +  K+T++     A VT  NWD +  +  +C    I  PPYF  WINLK  +   +G     +   +   G+   G  H G+DD KN  R++  ++  G
Subjt:  GI--KNTNF-----AVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRG

Query:  FRFSIT
            +T
Subjt:  FRFSIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCCCTTGAACGCAAAGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATCCCATTCAGTCTGCAACATAGTGGAAATTCTGC
TGATGGGTTCCAAGAACTTACAGATGAAATCAGTTGTCATGGCAGCAATGATATTCCTGAAACAAACCACCTATTGGCTAACAATTTCATTGAACGTCCAAATGAATTTC
ACAATAAACCTGCTTATCAGCATAATTCTGGATCATGGCAAGCCGTCCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAGTGCTTCCGAATGTCAGTTCTACTCT
TTGCCAGTGGAGAATCGCTTCCAATATTTTCCTTTCAAAATGTTTGAACAGAATTATCATTGCGATCGTCGGTTGCAAGAGTTCCAATATTTTGTGGTTATAGACTTTGA
AGCAACGTGTGATAAGGATAGAAATCCCCATCCGCAGGAAATAATTGAGTTCCCATCTGTAATTGTAAGTAGTGTGACTGGCCAACTAGAAGCTTGCTTTCAAACTTACG
TGCGTCCAACGTGCAATCAGCTCTTGAGCGATTTCTGCAGGGATCTAACAGGAATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCAT
GATAAATGGCTTGAAAAGAAGGGGATTAAGAATACAAATTTCGCGGTGGTAACTTGGTCTAACTGGGATTGCCGAGTCATGTTAGAGTCAGAATGCCGTTTCAAGAAGAT
TCGGAAGCCTCCATATTTCAACCGATGGATCAACTTAAAACTTCCATTTCGTGAGGTTTTTGGGGGAGCACAATGCAATCTAAAGGAAGCGGTTGAGATGGCAGGCTTAG
CTTGGCAAGGTCGTGCTCATTGTGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTTGCCCTTCTTATGCATAGAGGCTTCAGATTTTCCATCACCAATTCATTGATG
TGGCAGACTTCTGACTGCCCATTCCAATGGAAACAATCCCCAGGAGCCATGACACTCACTCCACAACCACCAATGAAACCGAAGCCTGTGCACGTACCCATCATCCAATA
CTACCCGTACTGTTTCTGCGGGGTTAGAAGCAGCAGAGGTATGGTTCGCAAGCCAGGACCAAAGCAAGGGAGTTGTTTCTTTGGCTGTGGGAACTGGACTGCTACCAAAG
GTGCACGTTGCCATTACTTCGAATGGGCCTCGCCCTGA
mRNA sequenceShow/hide mRNA sequence
CATATATACACTTATTTTATTTTATTTTTATTTCTTCCTTCCCGACGGCTTCCCTCCTCTCTCCCGGCTCACCTTCCAGATCACACCAGGAGGGATTTTCAGTGGTAGAT
CTGATGTACTTGGTGGTTGATCTCAATTACTCTGAAGATCATGATGGCCCTTGAACGCAAAGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATA
ATGGAATCCCATTCAGTCTGCAACATAGTGGAAATTCTGCTGATGGGTTCCAAGAACTTACAGATGAAATCAGTTGTCATGGCAGCAATGATATTCCTGAAACAAACCAC
CTATTGGCTAACAATTTCATTGAACGTCCAAATGAATTTCACAATAAACCTGCTTATCAGCATAATTCTGGATCATGGCAAGCCGTCCATTTTGACTCTCAAAAGGTGCA
GCAGTGCCAGATGAGTGCTTCCGAATGTCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCAATATTTTCCTTTCAAAATGTTTGAACAGAATTATCATTGCGATCGTC
GGTTGCAAGAGTTCCAATATTTTGTGGTTATAGACTTTGAAGCAACGTGTGATAAGGATAGAAATCCCCATCCGCAGGAAATAATTGAGTTCCCATCTGTAATTGTAAGT
AGTGTGACTGGCCAACTAGAAGCTTGCTTTCAAACTTACGTGCGTCCAACGTGCAATCAGCTCTTGAGCGATTTCTGCAGGGATCTAACAGGAATTCAGCAAATTCAGGT
GGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGATAAATGGCTTGAAAAGAAGGGGATTAAGAATACAAATTTCGCGGTGGTAACTTGGTCTAACTGGGATT
GCCGAGTCATGTTAGAGTCAGAATGCCGTTTCAAGAAGATTCGGAAGCCTCCATATTTCAACCGATGGATCAACTTAAAACTTCCATTTCGTGAGGTTTTTGGGGGAGCA
CAATGCAATCTAAAGGAAGCGGTTGAGATGGCAGGCTTAGCTTGGCAAGGTCGTGCTCATTGTGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTTGCCCTTCTTAT
GCATAGAGGCTTCAGATTTTCCATCACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTCCAATGGAAACAATCCCCAGGAGCCATGACACTCACTCCACAACCAC
CAATGAAACCGAAGCCTGTGCACGTACCCATCATCCAATACTACCCGTACTGTTTCTGCGGGGTTAGAAGCAGCAGAGGTATGGTTCGCAAGCCAGGACCAAAGCAAGGG
AGTTGTTTCTTTGGCTGTGGGAACTGGACTGCTACCAAAGGTGCACGTTGCCATTACTTCGAATGGGCCTCGCCCTGATGCATCGAAACACCAATGAATCCTTCTTATTC
GAAGCGTTCACTAAATGAATTTATGTAAAAAGAAAAAAAAAAGCAGTCAAAAAATAAACAAAAGAGTAAAAGAAAAAAATGTATTGGAAGATATGAAGTTTGATTTCTGT
CTCCTGGTAGAAGGTAAACTTGGGTGCTTGGTGAAGTTCTGAGTCATACAGAATTAGATGAGTTGCTGGTTGAATATTGTGAAATTCTGCTCCTCAAAATGAAAAAAGAA
AACACAAAAACAAAGTAGTTCAAGCTTTTGGGAGCTTCCAACTTGTAAAGCTGACTTATTGACTGGAGAACCTATTGGGGTGTGAGCTGTGAGAGATTATGGGTAGTGTT
AGGATGGTGCTTTTATAATCATCTTTCAGGCATATGCTAAATTATCTGAATAACCTTCTGGATAGGTATGCTTTCCTTATTTTCATCTTTTAATCTTATTCTAATGGCAA
TCAGTAGAATTGCTCATATCATTCCCCCAATGTTCTTCATTGGTTCTAATCTTAGTTTCCTTTTAGATCTATACAGCTTTTTCTTGCATTATTTGTTACTGATTACAGCA
ATGATCTGGTTAGCTTTTCATGTGTTTTGGACTGCCTCTTTTCATTAATCTTCAGTGGAATTTGCTTGTTCTTCCATAGCTTCAGGTTTGATGTGCAAGCTCTCGAAGTT
TTTTGGTTCAAAGAAGGGAAGGATATTGAAAATATCCTTGAAAAGATTTATTGCTTTTATCTTTTTGTTGAAGTGTTTGGTAG
Protein sequenceShow/hide protein sequence
MMALERKESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFIERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQMSASECQFYS
LPVENRFQYFPFKMFEQNYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRH
DKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSITNSLM
WQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQYYPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP