CuGenDBv2

Gene ID	CmoCh05G005270
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	methyl-CpG-binding domain-containing protein 8-like
Genome location	Cmo_Chr05:2543336..2543995
RNA-Seq Expression	CmoCh05G005270
Synteny	CmoCh05G005270
Gene Ontology terms	NA
InterPro domains	IPR037472 - Methyl-CpG-binding domain-containing protein 8

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6598690.1 Methyl-CpG-binding domain-containing protein 8, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-107

97.72

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Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASTTMVAS SNDSLRMNTLP+IDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QSS RLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQ NGNAAPNSK
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVMVML
        SGCEKRAAA EEEIVMVML
Subjt:  SGCEKRAAAEEEEIVMVML

KAG7029632.1 Methyl-CpG-binding domain-containing protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.7e-108

97.72

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Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVASPSNDSLRMNTLP+IDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QSS RLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQ NGNAAPNSK
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVMVML
        SGCEKRAAA EEEIVMVML
Subjt:  SGCEKRAAAEEEEIVMVML

XP_022961982.1 methyl-CpG-binding domain-containing protein 8-like [Cucurbita moschata]

5.0e-111

100

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Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVMVML
        SGCEKRAAAEEEEIVMVML
Subjt:  SGCEKRAAAEEEEIVMVML

XP_022997262.1 methyl-CpG-binding domain-containing protein 8-like [Cucurbita maxima]

7.4e-107

96.8

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Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASTTMVASPSND+LRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQ SSS SSSTFRS
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QSS RLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQ NGNAAPNSK
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVMVML
        SGCEKRAA EEEEIVMVML
Subjt:  SGCEKRAAAEEEEIVMVML

XP_023546077.1 methyl-CpG-binding domain-containing protein 8-like [Cucurbita pepo subsp. pepo]

3.7e-106

97.72

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Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASTTMVAS SNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QSS RLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQ NGNAAPNSK
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVMVML
        SGCEKR AAEEEEIVMVML
Subjt:  SGCEKRAAAEEEEIVMVML

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BS27 methyl-CpG-binding domain-containing protein 8 isoform X2

1.6e-91

86.3

Show/hide

Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASTTMVASPSN+S RMNTLPIIDLR LSQS+LYCLSR FSSSSSSTSQSN DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQ  SSSSSS  R 
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QS  RLD  SA+I+T  KQLFVGDSHC V++SYGD DEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSY PIKRRRGRPRKDSNRF Q NGNA PNSK
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVMVML
        SGCEKR  AEEEEIVMVML
Subjt:  SGCEKRAAAEEEEIVMVML

A0A6J1BV99 methyl-CpG-binding domain-containing protein 8 isoform X1

6.8e-90

86.11

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Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASTTMVASPSN+S RMNTLPIIDLR LSQS+LYCLSR FSSSSSSTSQSN DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQ  SSSSSS  R 
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QS  RLD  SA+I+T  KQLFVGDSHC V++SYGD DEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSY PIKRRRGRPRKDSNRF Q NGNA PNSK
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVM
        SGCEKR  AEEEEIVM
Subjt:  SGCEKRAAAEEEEIVM

A0A6J1HBJ5 methyl-CpG-binding domain-containing protein 8-like

2.4e-111

100

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Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVMVML
        SGCEKRAAAEEEEIVMVML
Subjt:  SGCEKRAAAEEEEIVMVML

A0A6J1K4I5 methyl-CpG-binding domain-containing protein 8-like

3.6e-107

96.8

Show/hide

Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASTTMVASPSND+LRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQ SSS SSSTFRS
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QSS RLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQ NGNAAPNSK
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVMVML
        SGCEKRAA EEEEIVMVML
Subjt:  SGCEKRAAAEEEEIVMVML

A0A6J1KK67 methyl-CpG-binding domain-containing protein 8-like isoform X2

7.5e-89

84.47

Show/hide

Query:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASTTMVASPS+D  RMNTLPIIDLR LSQS+LYCLSRF SSSSSS SQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK Q  SSSSSST R 
Subjt:  MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK
        QS  R D  SA+IVT  KQLFVG+SHC VNDSY DGDEDLVLVNHIYDESVP+SSYAIF SIPVDIIDSSY PIKRRRGRPRKDSNRFAQ NGNAA NS 
Subjt:  QSSHRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSK

Query:  SGCEKRAAAEEEEIVMVML
        SGC+KR  AEE+EIVMVML
Subjt:  SGCEKRAAAEEEEIVMVML

SwissProt top hits

e value

%identity

Alignment

Q9LME6 Methyl-CpG-binding domain-containing protein 8

1.1e-15

41.08

Show/hide

Query:  SNDSLRMNTLPIIDLRRLSQSDLYCLSRFFS---SSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSHRLD
        + + L   +LP+ID R LSQS+L  LS+  S   SSS+S + S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ      S   +   S R +
Subjt:  SNDSLRMNTLPIIDLRRLSQSDLYCLSRFFS---SSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSHRLD

Query:  VGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYGPIKRRRGRPRKDSN
            Q+ + L+ LF  DS+ +  +   +G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  VGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYGPIKRRRGRPRKDSN

Arabidopsis top hits

e value

%identity

Alignment

AT1G22310.2 methyl-CPG-binding domain 8

7.6e-17

41.08

Show/hide

Query:  SNDSLRMNTLPIIDLRRLSQSDLYCLSRFFS---SSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSHRLD
        + + L   +LP+ID R LSQS+L  LS+  S   SSS+S + S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ      S   +   S R +
Subjt:  SNDSLRMNTLPIIDLRRLSQSDLYCLSRFFS---SSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSHRLD

Query:  VGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYGPIKRRRGRPRKDSN
            Q+ + L+ LF  DS+ +  +   +G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  VGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYGPIKRRRGRPRKDSN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAACGACAGTCTTCGCATGAACACTCTGCCGATCATAGATCTCCGTCGCCTCTCCCAATCCGACCTCTATTGTCTTTC
TCGTTTCTTCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAGCGACGACGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAA
AACAAACCTATTCTCGCCTCCGTTTAGCCCCTCGCAAGCCCCAAATTTCTTCCTCCTCGTCCTCCTCCACATTTCGGTCCCAATCCTCCCACCGCCTAGATGTAGGCAGC
GCTCAGATTGTTACTCGCTTGAAGCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAACGACAGCTACGGCGACGGAGATGAGGACCTGGTCCTTGTTAACCACATTTA
CGACGAATCAGTACCTGATTCTTCCTACGCCATTTTCCAGAGTATTCCTGTTGATATTATCGATAGCAGTTATGGTCCGATTAAGCGGCGGAGAGGGCGACCGCGGAAGG
ACAGCAATCGGTTTGCTCAGCGTAATGGAAATGCCGCTCCGAACTCCAAAAGCGGCTGTGAAAAACGGGCGGCGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MASTTMVASPSNDSLRMNTLPIIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSHRLDVGS
AQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQRNGNAAPNSKSGCEKRAAAEEEEIVMVML

CmoCh05G005270 (gene) of Cucurbita moschata (Rifu) v1 genome