; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G005410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G005410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr05:2615036..2615887
RNA-Seq ExpressionCmoCh05G005410
SyntenyCmoCh05G005410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598704.1 hypothetical protein SDJN03_08482, partial [Cucurbita argyrosperma subsp. sororia]2.9e-8897.78Show/hide
Query:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK
        MSIISVSS SANLRSAV SRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILSIWK
Subjt:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK

Query:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAE IADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
Subjt:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

KAG7029646.1 hypothetical protein SDJN02_07986, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-9098.89Show/hide
Query:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK
        MSIISVSS SANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILSIWK
Subjt:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK

Query:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
Subjt:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

XP_022962246.1 uncharacterized protein LOC111462754 [Cucurbita moschata]1.7e-91100Show/hide
Query:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK
        MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK
Subjt:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK

Query:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
Subjt:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

XP_022997266.1 uncharacterized protein LOC111492223 [Cucurbita maxima]1.0e-8089.07Show/hide
Query:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVY---GVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILS
        MSI+SVS  SA+LRS V SRRHGSNLNLSHLLH+A SLP PRTIPKNR THITTYRDMAVY   G GGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILS
Subjt:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVY---GVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILS

Query:  IWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        IWKTTKYW PFLMLKQRVEKVVHVAEDVVDMVETAA+EVDKV+EEI DHLPKDSILQKTAVLVENTAETVAKDANLAA+IIGK
Subjt:  IWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

XP_023546969.1 uncharacterized protein LOC111805911 [Cucurbita pepo subsp. pepo]4.4e-8492.78Show/hide
Query:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK
        MSI+SVSS SA+LRS  +SR HGSNLNLSHLLH+AKSLP PRTIPKNRATHITTYRDMAVYGVGGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILSIWK
Subjt:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK

Query:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        TTKYW PFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVEN AETVAKDANLAA+IIGK
Subjt:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

TrEMBL top hitse value%identityAlignment
A0A1S3BDR2 uncharacterized protein LOC1034885521.4e-2748.37Show/hide
Query:  MSIISVSSRSANLRSAV----DSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAIL
        M I+S+SS S    S         R GS+LNL   LH  KSL LP T P  +  + T  R MA++     +G P   P  P   TP  LW+AG VLSAIL
Subjt:  MSIISVSSRSANLRSAV----DSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAIL

Query:  SIWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        SIWKT  YW+PFLMLK++V+ VV  AE+  +M ET A+ VDK AE+IA+HLP  S LQKTA  V++ A+ + KDA+LA D   K
Subjt:  SIWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

A0A5A7VBX0 Uncharacterized protein1.4e-2748.37Show/hide
Query:  MSIISVSSRSANLRSAV----DSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAIL
        M I+S+SS S    S         R GS+LNL   LH  KSL LP T P  +  + T  R MA++     +G P   P  P   TP  LW+AG VLSAIL
Subjt:  MSIISVSSRSANLRSAV----DSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAIL

Query:  SIWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        SIWKT  YW+PFLMLK++V+ VV  AE+  +M ET A+ VDK AE+IA+HLP  S LQKTA  V++ A+ + KDA+LA D   K
Subjt:  SIWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

A0A6J1BVN6 uncharacterized protein LOC1110051381.0e-2245.99Show/hide
Query:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRT---IPKNRATHIT---TYRD-MAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLS
        MSI+SV S      S     RHGS +NLS      + LP   T   + K  + H+T    YR  MA+Y  G GLG   P  P  P   PWPLW+ G ++S
Subjt:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRT---IPKNRATHIT---TYRD-MAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLS

Query:  AILSIWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        AIL  +   K W PFL+L Q V+KVV   E+V +MVETAAE V+KVAEE+A+HLP+   LQK A+ +EN A+T++KDA++A  I+ K
Subjt:  AILSIWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

A0A6J1HCK6 uncharacterized protein LOC1114627548.0e-92100Show/hide
Query:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK
        MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK
Subjt:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWK

Query:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
Subjt:  TTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

A0A6J1K717 uncharacterized protein LOC1114922234.9e-8189.07Show/hide
Query:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVY---GVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILS
        MSI+SVS  SA+LRS V SRRHGSNLNLSHLLH+A SLP PRTIPKNR THITTYRDMAVY   G GGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILS
Subjt:  MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVY---GVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILS

Query:  IWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK
        IWKTTKYW PFLMLKQRVEKVVHVAEDVVDMVETAA+EVDKV+EEI DHLPKDSILQKTAVLVENTAETVAKDANLAA+IIGK
Subjt:  IWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G14095.1 unknown protein1.9e-0833.04Show/hide
Query:  LPPPPP----PLTPWPLWVAGAVLSAILSIWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVA
        + P PP        W  WV G+ +S +LS W   +  K    ++   E VV   E V +MVE  A   D++AEE+A+ LP+ + L++ A+++E+ +E  A
Subjt:  LPPPPP----PLTPWPLWVAGAVLSAILSIWKTTKYWKPFLMLKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVA

Query:  KDANLAADIIGK
         +A+L  D + K
Subjt:  KDANLAADIIGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCATTTCAGTTTCCTCCCGTTCAGCCAACCTCCGTTCCGCCGTCGACTCCCGCCGCCATGGATCAAACCTTAACCTCAGCCATCTCCTTCACAGAGCCAAGAG
CTTGCCGTTGCCACGCACAATTCCCAAAAACAGAGCCACCCATATCACTACTTACAGAGACATGGCGGTTTACGGCGTCGGCGGCGGCCTTGGATCTCCCCTTCCTCTGC
CGCCTCCTCCTCCCCCATTGACTCCTTGGCCATTGTGGGTAGCAGGGGCGGTGCTGTCAGCAATTCTATCCATTTGGAAGACGACCAAATATTGGAAGCCTTTTCTTATG
TTAAAGCAGAGAGTGGAGAAGGTGGTGCATGTGGCGGAGGACGTGGTAGATATGGTGGAGACGGCGGCGGAGGAAGTGGATAAGGTGGCGGAAGAGATTGCTGATCATCT
CCCCAAAGACAGCATACTCCAAAAAACGGCAGTTTTAGTGGAAAATACAGCTGAAACCGTTGCTAAGGACGCCAATTTGGCGGCGGACATTATCGGCAAGGATTGTTTCC
GGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATCATTTCAGTTTCCTCCCGTTCAGCCAACCTCCGTTCCGCCGTCGACTCCCGCCGCCATGGATCAAACCTTAACCTCAGCCATCTCCTTCACAGAGCCAAGAG
CTTGCCGTTGCCACGCACAATTCCCAAAAACAGAGCCACCCATATCACTACTTACAGAGACATGGCGGTTTACGGCGTCGGCGGCGGCCTTGGATCTCCCCTTCCTCTGC
CGCCTCCTCCTCCCCCATTGACTCCTTGGCCATTGTGGGTAGCAGGGGCGGTGCTGTCAGCAATTCTATCCATTTGGAAGACGACCAAATATTGGAAGCCTTTTCTTATG
TTAAAGCAGAGAGTGGAGAAGGTGGTGCATGTGGCGGAGGACGTGGTAGATATGGTGGAGACGGCGGCGGAGGAAGTGGATAAGGTGGCGGAAGAGATTGCTGATCATCT
CCCCAAAGACAGCATACTCCAAAAAACGGCAGTTTTAGTGGAAAATACAGCTGAAACCGTTGCTAAGGACGCCAATTTGGCGGCGGACATTATCGGCAAGGATTGTTTCC
GGGCCTGAGTTCCCATATGACATAAGCGCTCTTGGGGCCATTCC
Protein sequenceShow/hide protein sequence
MSIISVSSRSANLRSAVDSRRHGSNLNLSHLLHRAKSLPLPRTIPKNRATHITTYRDMAVYGVGGGLGSPLPLPPPPPPLTPWPLWVAGAVLSAILSIWKTTKYWKPFLM
LKQRVEKVVHVAEDVVDMVETAAEEVDKVAEEIADHLPKDSILQKTAVLVENTAETVAKDANLAADIIGKDCFRA