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CmoCh05G006200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G006200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTranslation initiation factor IF-2
Genome locationCmo_Chr05:3111721..3112140
RNA-Seq ExpressionCmoCh05G006200
SyntenyCmoCh05G006200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598780.1 hypothetical protein SDJN03_08558, partial [Cucurbita argyrosperma subsp. sororia]3.8e-3297.56Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        MMEHGML PEKAKKAYEKKLRRQKEQRSGTPIKSPKP SKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
KAG7029719.1 hypothetical protein SDJN02_08061 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3398.78Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        MMEHGML PEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
XP_022962317.1 protein spalten-like [Cucurbita moschata]3.1e-34100Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
XP_022996595.1 uncharacterized protein LOC111491788 [Cucurbita maxima]1.4e-2995.18Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TNDSDDDDDNFILSPKRRKM
        MMEHGML PEKAKKAYEKKLRRQKEQRSGTPIKSPK  SKPESSQRPQQPSKNGDLKAKQKV TNDSDDDDDNFILSPKRRKM
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TNDSDDDDDNFILSPKRRKM
XP_023546622.1 protein spalten-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-3096.34Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        MMEHGML PEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDS  DDDNFILSPKRRKM
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
TrEMBL top hitse value%identityAlignment
A0A438K8M4 Uncharacterized protein2.9e-2581.48Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRK
        MMEHG+L PEKAKKAYEKK RRQK+ R GTP+KSPKPPS+PESSQRPQQ SKNGD+KAK+++TNDSDDDDD FILSPK+RK
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRK
A0A6J1GJC9 uncharacterized protein LOC111454380 isoform X11.9e-2989.02Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        MMEHGML PEKAKKAYEKKLRRQKEQR+GTPIKS KPPS+PESSQRPQQPSKNGDLKAK+K+TN+SDDDD++FILSPKRRKM
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
A0A6J1HCD9 protein spalten-like1.5e-34100Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
A0A6J1K794 uncharacterized protein LOC1114917886.6e-3095.18Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TNDSDDDDDNFILSPKRRKM
        MMEHGML PEKAKKAYEKKLRRQKEQRSGTPIKSPK  SKPESSQRPQQPSKNGDLKAKQKV TNDSDDDDDNFILSPKRRKM
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TNDSDDDDDNFILSPKRRKM
A0A6J1KPA8 uncharacterized protein LOC1114963741.9e-2989.02Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        MMEHGML PEKAKKAYEKKLRRQKEQR+GTPIKS KPPS+PESSQRPQQP KNGDLKAK+K+TNDSDDDD++FILSPKRRKM
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11600.1 unknown protein1.6e-1560.71Show/hide
Query:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKS-PKPPSKPESSQRPQQPSKNG-DLKAKQKVTNDSDDDDDNFILSPKRRKM
        +MEHGML PEKAK+A+EKK R+ K+ R GTP KS P   SK ESSQR      NG D + K+KV +D DDDDD+FILS KRRK+
Subjt:  MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKS-PKPPSKPESSQRPQQPSKNG-DLKAKQKVTNDSDDDDDNFILSPKRRKM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGCACGGCATGTTACCACCCGAAAAGGCGAAAAAGGCATACGAGAAGAAACTAAGAAGACAAAAGGAACAGAGATCCGGGACTCCGATTAAATCACCAAAACC
GCCGAGCAAACCAGAGAGTTCGCAGAGGCCACAGCAACCCTCTAAGAATGGCGATCTAAAAGCAAAGCAAAAGGTCACGAACGATAGTGACGACGACGACGACAACTTCA
TTCTAAGTCCCAAGAGAAGGAAAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGCACGGCATGTTACCACCCGAAAAGGCGAAAAAGGCATACGAGAAGAAACTAAGAAGACAAAAGGAACAGAGATCCGGGACTCCGATTAAATCACCAAAACC
GCCGAGCAAACCAGAGAGTTCGCAGAGGCCACAGCAACCCTCTAAGAATGGCGATCTAAAAGCAAAGCAAAAGGTCACGAACGATAGTGACGACGACGACGACAACTTCA
TTCTAAGTCCCAAGAGAAGGAAAATGTAGGGAAAACACACCCGCCCTGCCTTCGTTCTTTATTATCATACTTTTCGAGGAATTACTTGATTAAAATTTCCTTAGAGTTGA
TTATAACCCAACAGTATTTACCTGGACATTCTTTTATACTCCACAGCTGTGTATGAACAATAATTTTAGAAGAGACGAGTCTTATGGTTC
Protein sequenceShow/hide protein sequence
MMEHGMLPPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM