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CmoCh05G006330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G006330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontwo-on-two hemoglobin-3
Genome locationCmo_Chr05:3204450..3206500
RNA-Seq ExpressionCmoCh05G006330
SyntenyCmoCh05G006330
Gene Ontology termsGO:0015671 - oxygen transport (biological process)
GO:0005344 - oxygen carrier activity (molecular function)
GO:0019825 - oxygen binding (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR001486 - Truncated hemoglobin
IPR009050 - Globin-like superfamily
IPR012292 - Globin/Protoglobin
IPR044203 - Two-on-two hemoglobin-3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065023.1 two-on-two hemoglobin-3 isoform X2 [Cucumis melo var. makuwa]2.0e-6384.21Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFV LSTKFYNR           VYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRM NFFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
KAG6598792.1 Two-on-two hemoglobin-3, partial [Cucurbita argyrosperma subsp. sororia]8.8e-6484.21Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQT VNLSTKFYNR           VYD+EEEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
XP_022962612.1 two-on-two hemoglobin-3 [Cucurbita moschata]8.0e-6585.53Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNR           VYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
XP_022996482.1 two-on-two hemoglobin-3 [Cucurbita maxima]8.0e-6585.53Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNR           VYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
XP_023545796.1 two-on-two hemoglobin-3 [Cucurbita pepo subsp. pepo]1.8e-6484.87Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNR           VYD+EEEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
TrEMBL top hitse value%identityAlignment
A0A1S3BBR6 two-on-two hemoglobin-3 isoform X16.2e-6384Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFV LSTKFYNR           VYD++EEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRH
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRM NFFRH
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRH
A0A1S3BCI0 two-on-two hemoglobin-3 isoform X24.7e-6382.89Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFV LSTKFYNR           VYD++EEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRM NFFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
A0A5A7VA21 Two-on-two hemoglobin-3 isoform X29.5e-6484.21Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFV LSTKFYNR           VYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRM NFFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
A0A6J1HD51 two-on-two hemoglobin-33.9e-6585.53Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNR           VYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
A0A6J1K220 two-on-two hemoglobin-33.9e-6585.53Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNR           VYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
SwissProt top hitse value%identityAlignment
Q67XG0 Two-on-two hemoglobin-34.7e-5268.42Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKAS  SGV + +AFAIDE NLF KLGLQTF+NLST FY           T+VYD+EEEWF+SIF NS KEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTH+AAERWL HMQ ALD++ DID DSK++M  FFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
Arabidopsis top hitse value%identityAlignment
AT4G32690.1 hemoglobin 33.3e-5368.42Show/hide
Query:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------
        MQSLQDKAS  SGV + +AFAIDE NLF KLGLQTF+NLST FY           T+VYD+EEEWF+SIF NS KEDAIQNQYEFFVQRMG         
Subjt:  MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---------

Query:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS
        GHPALIGRHRPFPVTH+AAERWL HMQ ALD++ DID DSK++M  FFRH +
Subjt:  GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPDIDADSKVRMTNFFRHAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGTTTGCAAGATAAGGCTTCCGAGTGGAGCGGAGTGAAGCGTGAAGATGCCTTCGCCATCGATGAAGTCAATTTGTTTCAGAAGTTAGGCCTCCAGACGTTCGT
CAATCTATCGACCAAATTCTATAACAGGTCTGTCTGTGTTCATGAATGCAGCATCACGAAGGTGTACGACGAGGAGGAGGAGTGGTTCCGATCAATTTTTGGGAATTCGA
AGAAAGAGGATGCAATTCAAAACCAGTACGAGTTCTTCGTGCAGAGAATGGGAGGTCATCCAGCACTTATAGGTCGACATCGACCGTTCCCAGTCACGCATAGAGCGGCA
GAGAGGTGGTTACATCACATGCAGCTAGCATTAGACGAAACCCCAGATATAGATGCAGATTCAAAAGTCAGAATGACAAACTTTTTCAGGCATGCATCCTCGAATCTATA
A
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGTTTGCAAGATAAGGCTTCCGAGTGGAGCGGAGTGAAGCGTGAAGATGCCTTCGCCATCGATGAAGTCAATTTGTTTCAGAAGTTAGGCCTCCAGACGTTCGT
CAATCTATCGACCAAATTCTATAACAGGTCTGTCTGTGTTCATGAATGCAGCATCACGAAGGTGTACGACGAGGAGGAGGAGTGGTTCCGATCAATTTTTGGGAATTCGA
AGAAAGAGGATGCAATTCAAAACCAGTACGAGTTCTTCGTGCAGAGAATGGGAGGTCATCCAGCACTTATAGGTCGACATCGACCGTTCCCAGTCACGCATAGAGCGGCA
GAGAGGTGGTTACATCACATGCAGCTAGCATTAGACGAAACCCCAGATATAGATGCAGATTCAAAAGTCAGAATGACAAACTTTTTCAGGCATGCATCCTCGAATCTATA
A
Protein sequenceShow/hide protein sequence
MQSLQDKASEWSGVKREDAFAIDEVNLFQKLGLQTFVNLSTKFYNRSVCVHECSITKVYDEEEEWFRSIFGNSKKEDAIQNQYEFFVQRMGGHPALIGRHRPFPVTHRAA
ERWLHHMQLALDETPDIDADSKVRMTNFFRHASSNL