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CmoCh05G006710 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G006710
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFLZ-type domain-containing protein
Genome locationCmo_Chr05:3405061..3406168
RNA-Seq ExpressionCmoCh05G006710
SyntenyCmoCh05G006710
Gene Ontology termsNA
InterPro domainsIPR044585 - FCS-Like Zinc finger 10/11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598823.1 hypothetical protein SDJN03_08601, partial [Cucurbita argyrosperma subsp. sororia]5.9e-3791.11Show/hide
Query:  SKTVLFGLRSVTEKSNCSSRENHYQGPKSLPKASIELLQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSCTTTESIAARRSAKGARVLEK
        +KTVLFGLRSVTEKSNCSSR N YQGPKSLPKASIELLQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSCTTTES+AA RS +GARV EK
Subjt:  SKTVLFGLRSVTEKSNCSSRENHYQGPKSLPKASIELLQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSCTTTESIAARRSAKGARVLEK

XP_004138874.1 FCS-Like Zinc finger 10 isoform X2 [Cucumis sativus]3.2e-2753.25Show/hide
Query:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--------------------ASIEL----LQCKSFGNYSCSFESYRSFAPRAGLTGHSL-GSCT
        RSS SKT LFG RSV +KSNC  + N  QGPKSLPK                       E+    L+C+ FGNYS SF+SYR+FAPR+ + GHS+  S T
Subjt:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--------------------ASIEL----LQCKSFGNYSCSFESYRSFAPRAGLTGHSL-GSCT

Query:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT
        TTES A+    +  RV EK PL KPCS SLG+S D+ S +PLSASEIELSEDYT
Subjt:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT

XP_022131379.1 uncharacterized protein LOC111004616 isoform X1 [Momordica charantia]7.7e-2957.14Show/hide
Query:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--ASIELLQCKS----------------------FG-NYSCSFESYRSFAPRAGLTGHSLGSCT
        RSS SKTVLFG RSV +  NC S  N +QGPKSLPK  A   LL+ KS                      FG NYS SF+SYRSFA  +GLTGHSLGS T
Subjt:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--ASIELLQCKS----------------------FG-NYSCSFESYRSFAPRAGLTGHSLGSCT

Query:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT
        TTES+A+ R A   R  EKCPL +PC +SLG+SG +  KRPLSA+EIELSEDYT
Subjt:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT

XP_022131381.1 uncharacterized protein LOC111004616 isoform X2 [Momordica charantia]7.7e-2957.14Show/hide
Query:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--ASIELLQCKS----------------------FG-NYSCSFESYRSFAPRAGLTGHSLGSCT
        RSS SKTVLFG RSV +  NC S  N +QGPKSLPK  A   LL+ KS                      FG NYS SF+SYRSFA  +GLTGHSLGS T
Subjt:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--ASIELLQCKS----------------------FG-NYSCSFESYRSFAPRAGLTGHSLGSCT

Query:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT
        TTES+A+ R A   R  EKCPL +PC +SLG+SG +  KRPLSA+EIELSEDYT
Subjt:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT

XP_038884254.1 LOW QUALITY PROTEIN: FCS-Like Zinc finger 10-like [Benincasa hispida]2.5e-3258.17Show/hide
Query:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLP-----------KASIEL-------------LQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSCTT
        RSS SKT LFG RSVT+KSNC S+ N  QGPKSLP           K  IE               +C+ FGNYS SF+SYR+FAP++G TGHSL S TT
Subjt:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLP-----------KASIEL-------------LQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSCTT

Query:  TESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT
        TE++A+ R A+  RV EK P  KP SISLGIS D+ SKRPLSASEIELSEDYT
Subjt:  TESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT

TrEMBL top hitse value%identityAlignment
A0A0A0LPE0 FLZ-type domain-containing protein1.6e-2753.25Show/hide
Query:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--------------------ASIEL----LQCKSFGNYSCSFESYRSFAPRAGLTGHSL-GSCT
        RSS SKT LFG RSV +KSNC  + N  QGPKSLPK                       E+    L+C+ FGNYS SF+SYR+FAPR+ + GHS+  S T
Subjt:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--------------------ASIEL----LQCKSFGNYSCSFESYRSFAPRAGLTGHSL-GSCT

Query:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT
        TTES A+    +  RV EK PL KPCS SLG+S D+ S +PLSASEIELSEDYT
Subjt:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT

A0A1S3BBG4 uncharacterized protein LOC1034882513.5e-2753.9Show/hide
Query:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLP-----------KASIEL-------------LQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSC-T
        RSS SKT LFG RSV +KSNC  + N  QGPKSLP           K  IE              L+ + FGNYS SF+SYR FAPRA + G S+ SC T
Subjt:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLP-----------KASIEL-------------LQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSC-T

Query:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT
        TTES+A+    +  RV EK PL KPCSISLG+S D+ S +PLSAS+IELSEDYT
Subjt:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT

A0A5A7VHM8 FLZ-type domain-containing protein1.0e-2653.25Show/hide
Query:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLP-----------KASIEL-------------LQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSC-T
        RSS SKT LFG RSV +KSNC  + N  QGPKSLP           K  IE              L+ + FGNYS SF+SYR FAPRA + G S+ SC T
Subjt:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLP-----------KASIEL-------------LQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSC-T

Query:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT
        TTES+A+    +  RV +K PL KPCSISLG+S D+ S +PLSAS+IELSEDYT
Subjt:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT

A0A6J1BPD3 uncharacterized protein LOC111004616 isoform X23.7e-2957.14Show/hide
Query:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--ASIELLQCKS----------------------FG-NYSCSFESYRSFAPRAGLTGHSLGSCT
        RSS SKTVLFG RSV +  NC S  N +QGPKSLPK  A   LL+ KS                      FG NYS SF+SYRSFA  +GLTGHSLGS T
Subjt:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--ASIELLQCKS----------------------FG-NYSCSFESYRSFAPRAGLTGHSLGSCT

Query:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT
        TTES+A+ R A   R  EKCPL +PC +SLG+SG +  KRPLSA+EIELSEDYT
Subjt:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT

A0A6J1BQ36 uncharacterized protein LOC111004616 isoform X13.7e-2957.14Show/hide
Query:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--ASIELLQCKS----------------------FG-NYSCSFESYRSFAPRAGLTGHSLGSCT
        RSS SKTVLFG RSV +  NC S  N +QGPKSLPK  A   LL+ KS                      FG NYS SF+SYRSFA  +GLTGHSLGS T
Subjt:  RSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPK--ASIELLQCKS----------------------FG-NYSCSFESYRSFAPRAGLTGHSLGSCT

Query:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT
        TTES+A+ R A   R  EKCPL +PC +SLG+SG +  KRPLSA+EIELSEDYT
Subjt:  TTESIAARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTGTCAGCCCATGTCATATGGTTCTGCAGGGATTGGATTTTCGGAGTGACAATTTGAAAAGCAGTGGAGCATGTGAATCTCGATCATCCGGTAGTAAAACTGT
TCTATTCGGGCTTCGAAGCGTGACCGAGAAGTCGAATTGTTCATCACGGGAAAATCATTACCAGGGACCTAAATCCTTGCCTAAAGCTTCCATTGAACTGTTACAATGCA
AGTCTTTTGGGAACTACTCTTGTTCTTTTGAATCCTACAGGTCGTTTGCTCCTCGAGCTGGTTTAACCGGTCACAGCCTCGGTAGTTGTACTACTACCGAGAGCATTGCT
GCTCGTCGGTCAGCCAAAGGAGCTCGAGTGTTGGAAAAATGTCCCCTCATGAAACCTTGTTCAATTTCTTTAGGCATATCAGGTGACAGCATATCTAAGAGGCCTCTCTC
AGCTAGTGAGATTGAGCTGTCTGAGGATTATACTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTTGTCAGCCCATGTCATATGGTTCTGCAGGGATTGGATTTTCGGAGTGACAATTTGAAAAGCAGTGGAGCATGTGAATCTCGATCATCCGGTAGTAAAACTGT
TCTATTCGGGCTTCGAAGCGTGACCGAGAAGTCGAATTGTTCATCACGGGAAAATCATTACCAGGGACCTAAATCCTTGCCTAAAGCTTCCATTGAACTGTTACAATGCA
AGTCTTTTGGGAACTACTCTTGTTCTTTTGAATCCTACAGGTCGTTTGCTCCTCGAGCTGGTTTAACCGGTCACAGCCTCGGTAGTTGTACTACTACCGAGAGCATTGCT
GCTCGTCGGTCAGCCAAAGGAGCTCGAGTGTTGGAAAAATGTCCCCTCATGAAACCTTGTTCAATTTCTTTAGGCATATCAGGTGACAGCATATCTAAGAGGCCTCTCTC
AGCTAGTGAGATTGAGCTGTCTGAGGATTATACTGTGTAA
Protein sequenceShow/hide protein sequence
MAVVSPCHMVLQGLDFRSDNLKSSGACESRSSGSKTVLFGLRSVTEKSNCSSRENHYQGPKSLPKASIELLQCKSFGNYSCSFESYRSFAPRAGLTGHSLGSCTTTESIA
ARRSAKGARVLEKCPLMKPCSISLGISGDSISKRPLSASEIELSEDYTV