CuGenDBv2

Gene ID	CmoCh05G006880
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Genome location	Cmo_Chr05:3514807..3515425
RNA-Seq Expression	CmoCh05G006880
Synteny	CmoCh05G006880
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6598839.1 Pleiotropic drug resistance protein 1, partial [Cucurbita argyrosperma subsp. sororia]

9.0e-71

98.53

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Query:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRN NGERWQKRCVLGVVGVA+ALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
        PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL

XP_022929729.1 uncharacterized protein LOC111436227 [Cucurbita moschata]

8.2e-72

100

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Query:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
        PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL

XP_022997474.1 uncharacterized protein LOC111492380 [Cucurbita maxima]

2.2e-69

97.79

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Query:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMS TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVA+ALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
        PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFS+
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL

XP_023521869.1 uncharacterized protein LOC111785720 [Cucurbita pepo subsp. pepo]

3.4e-70

97.06

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Query:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVA+ALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
        PRPAARRRWEPAALPRTAPQLRTIH S LSTRCFS+
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL

XP_023547232.1 uncharacterized protein LOC111806106 [Cucurbita pepo subsp. pepo]

1.5e-70

97.79

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Query:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVA+ALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
        PRPAARRRWEPAALPRTAPQLRTIH SSLSTRCFS+
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLU6 Uncharacterized protein

6.6e-51

78.2

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Query:  TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLPRPAA
        TTCCLNNLNPPPRL   ST  T   LLP NGNGE W+KRCVLG  GV  AL M GES GVEM ++NFVDSRKWSEERMCPQWRLNSLETIVPENLPRPAA
Subjt:  TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLPRPAA

Query:  RRRWEPAALPRT--APQLRTIHTSSLSTRCFSL
        RRRW+PAALP+T  APQLRT +T+SLSTRCFS+
Subjt:  RRRWEPAALPRT--APQLRTIHTSSLSTRCFSL

A0A1S3BBI5 uncharacterized protein LOC103488267

1.2e-49

77.3

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Query:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGER-WQKRCVLGVVGVAIALQMVGESGGVEMGDVN-FVD-SRKWSEERMCPQWRLNSLETIVP
        MAM+ TTCC+NNLNPPPRL   ST  T N LLP NG+G++ W+KRCVLGV GV  AL M GESGGVEMG+VN FVD SRKWSEERMCPQWRLNSLETIVP
Subjt:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGER-WQKRCVLGVVGVAIALQMVGESGGVEMGDVN-FVD-SRKWSEERMCPQWRLNSLETIVP

Query:  ENLPRPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSL
        ENLPRPAARRRW+PAALP T  APQLRT +T+SLSTRCFS+
Subjt:  ENLPRPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSL

A0A5A7VGF0 Uncharacterized protein

4.7e-49

76.6

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Query:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGER-WQKRCVLGVVGVAIALQMVGESGGVEMGDVN-FVD-SRKWSEERMCPQWRLNSLETIVP
        MAM+ TTCC+NNLNPPPRL   ST  T N LLP NG+G++ W+KRCVLGV GV  AL M GESGGVEMG+VN FVD SRKWSEERMCPQWRLNSLETIVP
Subjt:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGER-WQKRCVLGVVGVAIALQMVGESGGVEMGDVN-FVD-SRKWSEERMCPQWRLNSLETIVP

Query:  ENLPRPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSL
        ENLPRPAARRRW+PAALP T  APQLRT + +SLSTRCFS+
Subjt:  ENLPRPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSL

A0A6J1EPL8 uncharacterized protein LOC111436227

4.0e-72

100

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Query:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
        PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL

A0A6J1KBE7 uncharacterized protein LOC111492380

1.1e-69

97.79

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Query:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMS TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVA+ALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL
        PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFS+
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G25625.1 unknown protein

3.9e-11

35.1

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Query:  TCCLN--NLNPPPRLLPKSTTPTTNQL-LPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDS-----------------RKWSEERMCPQ
        +CCLN   L+        S   TT+++   R  N    +K     V+GVA  + +    GG+++ DV  V++                 R+WS++R CP 
Subjt:  TCCLN--NLNPPPRLLPKSTTPTTNQL-LPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDS-----------------RKWSEERMCPQ

Query:  WRLNSLETIVPENLPRPAARRRWEPAALPR-TAPQLRTIHTSSLSTRCFSL
        W  NSLETIVPENLPRP+A RR E A L +  AP +  + T      CFS+
Subjt:  WRLNSLETIVPENLPRPAARRRWEPAALPR-TAPQLRTIHTSSLSTRCFSL

AT2G25625.2 unknown protein

3.5e-12

35.33

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Query:  TCCLN--NLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDS-----------------RKWSEERMCPQW
        +CCLN   L+        S   TT+++  R  N    +K     V+GVA  + +    GG+++ DV  V++                 R+WS++R CP W
Subjt:  TCCLN--NLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDS-----------------RKWSEERMCPQW

Query:  RLNSLETIVPENLPRPAARRRWEPAALPR-TAPQLRTIHTSSLSTRCFSL
          NSLETIVPENLPRP+A RR E A L +  AP +  + T      CFS+
Subjt:  RLNSLETIVPENLPRPAARRRWEPAALPR-TAPQLRTIHTSSLSTRCFSL

Sequences

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CDS sequence

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ATGGCTATGTCCACCACCACTTGTTGCCTGAACAACCTCAATCCGCCGCCGCGGCTGCTCCCGAAGTCCACCACACCCACCACCAATCAACTCCTTCCACGGAATGGAAA
TGGAGAACGGTGGCAAAAGCGGTGCGTTTTGGGGGTGGTCGGAGTGGCAATTGCTCTGCAAATGGTCGGAGAAAGTGGCGGCGTAGAAATGGGAGATGTCAATTTTGTTG
ATTCCAGAAAATGGAGCGAAGAAAGAATGTGCCCACAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCAAGGCCGGCCGCCCGCCGGAGATGGGAG
CCCGCCGCCCTTCCTCGCACAGCGCCTCAACTCCGAACCATACATACATCTTCCCTCTCTACTCGCTGCTTCTCTCTGTAA

mRNA sequence

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CCAAATTCCACAGTTCCATAAACACACCAACACAGAAATTCATCAAAAGAAAATGGCTATGTCCACCACCACTTGTTGCCTGAACAACCTCAATCCGCCGCCGCGGCTGC
TCCCGAAGTCCACCACACCCACCACCAATCAACTCCTTCCACGGAATGGAAATGGAGAACGGTGGCAAAAGCGGTGCGTTTTGGGGGTGGTCGGAGTGGCAATTGCTCTG
CAAATGGTCGGAGAAAGTGGCGGCGTAGAAATGGGAGATGTCAATTTTGTTGATTCCAGAAAATGGAGCGAAGAAAGAATGTGCCCACAGTGGCGGCTCAATTCCCTCGA
AACCATCGTGCCGGAGAATCTTCCAAGGCCGGCCGCCCGCCGGAGATGGGAGCCCGCCGCCCTTCCTCGCACAGCGCCTCAACTCCGAACCATACATACATCTTCCCTCT
CTACTCGCTGCTTCTCTCTGTAATTACCAAATCCCTAAATGCCAATTCTTCAATACCA

Protein sequence

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MAMSTTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAIALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLPRPAARRRWE
PAALPRTAPQLRTIHTSSLSTRCFSL

CmoCh05G006880 (gene) of Cucurbita moschata (Rifu) v1 genome