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CmoCh05G006950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G006950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionArf-GAP with coiled-coil
Genome locationCmo_Chr05:3557004..3568044
RNA-Seq ExpressionCmoCh05G006950
SyntenyCmoCh05G006950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5514445.1 hypothetical protein DKX38_028351 [Salix brachista]1.2e-0950.57Show/hide
Query:  LEGSSIELDIDHGASGGEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW
        ++G+  +L   +    GEI     SGL + V        +P E VQNDRDKLVL I+L  GFV GSLTNETMP RQ G AI+P GPW
Subjt:  LEGSSIELDIDHGASGGEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW

KAF2316931.1 hypothetical protein GH714_006666 [Hevea brasiliensis]4.4e-0957.14Show/hide
Query:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP
        G+I     SGL + +V    GSG+  E VQNDRDKLVL I+   G V GS TNETMP RQ G A EPGGP
Subjt:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP

KAF9662684.1 hypothetical protein SADUNF_Sadunf18G0079900 [Salix dunnii]4.4e-0975.56Show/hide
Query:  EQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW
        E VQNDRDKLVL I+L  GFV GSLTNETMP RQ G AI+P GPW
Subjt:  EQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW

KAG5593854.1 hypothetical protein H5410_035086 [Solanum commersonii]2.3e-1056.34Show/hide
Query:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW
        GE  EQ  SGLH GV NV G   + +++ Q   D+LV A SL IG V  SLTNETMP R  G  IEPGGPW
Subjt:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW

MCI07793.1 hypothetical protein [Trifolium medium]5.7e-0962.5Show/hide
Query:  GLHNGVVNVGGGSGTPLEQVQND-RDK--LVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP
        GL NGVV       T LE VQND +DK  +VL I+   G V GSLTNETMP+RQ GHAIEPGGP
Subjt:  GLHNGVVNVGGGSGTPLEQVQND-RDK--LVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP

TrEMBL top hitse value%identityAlignment
A0A2N9EMC1 Uncharacterized protein9.8e-1570Show/hide
Query:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP
        G I EQ  SGL NGV N    S + LE VQNDRDKLVLAISL  G V GSLTN+TMP RQ GHAIEPGGP
Subjt:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP

A0A392P6W3 Uncharacterized protein (Fragment)2.8e-0962.5Show/hide
Query:  GLHNGVVNVGGGSGTPLEQVQND-RDK--LVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP
        GL NGVV       T LE VQND +DK  +VL I+   G V GSLTNETMP+RQ GHAIEPGGP
Subjt:  GLHNGVVNVGGGSGTPLEQVQND-RDK--LVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP

A0A5N5JA62 Uncharacterized protein5.6e-1050.57Show/hide
Query:  LEGSSIELDIDHGASGGEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW
        ++G+  +L   +    GEI     SGL + V        +P E VQNDRDKLVL I+L  GFV GSLTNETMP RQ G AI+P GPW
Subjt:  LEGSSIELDIDHGASGGEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW

A0A6A6MSZ3 Uncharacterized protein2.1e-0957.14Show/hide
Query:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP
        G+I     SGL + +V    GSG+  E VQNDRDKLVL I+   G V GS TNETMP RQ G A EPGGP
Subjt:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGP

M1DR72 Ankyrin repeat-rich protein4.3e-1054.93Show/hide
Query:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW
        GE  EQ  SGLH GV N  G   + +++ Q   D+LV A SL IG V  SLTNETMP R  G  IEPGGPW
Subjt:  GEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQSGHAIEPGGPW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCCTATCCATGAAAACTATAAGAATTGGACGTACCGAAATGACTCTTTGTTGAGTGATGATCCTTCCTTCTCAAACGAGTTAGAAGGTAGCTCCATTGAA
TTAGACATTGATCACGGTGCTTCGGGCGGGGAAATTTGGGAACAAGTGAACTCAGGGTTGCATAATGGGGTGGTTAATGTGGGAGGTGGTTCAGGTACCCCACTA
GAACAAGTGCAGAATGATAGAGACAAACTTGTTCTGGCAATCTCTTTGGCAATTGGCTTTGTTTTGGGAAGTTTAACGAACGAAACAATGCCATTTCGGCAGAGC
GGGCATGCGATTGAACCGGGTGGACCATGGGAACATGATGATGTACATCCAAAATTTCGGTGTACTGGGTACATAATCAGCAAGCAGAAGTCGGATGCACCGAGA
ATGACCATTCAGAGCAGCCAAGTGAAGAGCAGTACCTCCGTTCAAATAATCCGATCTGTGAATCTGATCTCCAATGAAATGCATGACAACATTATCCAACATGTC
CCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCCTATCCATGAAAACTATAAGAATTGGACGTACCGAAATGACTCTTTGTTGAGTGATGATCCTTCCTTCTCAAACGAGTTAGAAGGTAGCTCCATTGAA
TTAGACATTGATCACGGTGCTTCGGGCGGGGAAATTTGGGAACAAGTGAACTCAGGGTTGCATAATGGGGTGGTTAATGTGGGAGGTGGTTCAGGTACCCCACTA
GAACAAGTGCAGAATGATAGAGACAAACTTGTTCTGGCAATCTCTTTGGCAATTGGCTTTGTTTTGGGAAGTTTAACGAACGAAACAATGCCATTTCGGCAGAGC
GGGCATGCGATTGAACCGGGTGGACCATGGGAACATGATGATGTACATCCAAAATTTCGGTGTACTGGGTACATAATCAGCAAGCAGAAGTCGGATGCACCGAGA
ATGACCATTCAGAGCAGCCAAGTGAAGAGCAGTACCTCCGTTCAAATAATCCGATCTGTGAATCTGATCTCCAATGAAATGCATGACAACATTATCCAACATGTC
CCTTAA
Protein sequenceShow/hide protein sequence
MGPIHENYKNWTYRNDSLLSDDPSFSNELEGSSIELDIDHGASGGEIWEQVNSGLHNGVVNVGGGSGTPLEQVQNDRDKLVLAISLAIGFVLGSLTNETMPFRQS
GHAIEPGGPWEHDDVHPKFRCTGYIISKQKSDAPRMTIQSSQVKSSTSVQIIRSVNLISNEMHDNIIQHVP