; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G008170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G008170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionubiquitin domain-containing protein 7SL RNA2-like
Genome locationCmo_Chr05:4905527..4906014
RNA-Seq ExpressionCmoCh05G008170
SyntenyCmoCh05G008170
Gene Ontology termsGO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0070628 - proteasome binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603761.1 Ubiquitin domain-containing protein 7SL RNA1, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3193.15Show/hide
Query:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        SKIPMEVNPTDN+G+LKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRS RWHGVAH DTIEIFNGSVS GS
Subjt:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

XP_004134970.1 ubiquitin domain-containing protein 7SL RNA1 [Cucumis sativus]4.9e-2984.93Show/hide
Query:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        SKIPMEVNPTDN+G+LKKEL+KLQQR+ FHLPPEGFFFIYDRDVMDEDRS RWHGVAH DTIEIFNG+++ GS
Subjt:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

XP_008439960.1 PREDICTED: uncharacterized protein LOC103484590 [Cucumis melo]4.9e-2984.93Show/hide
Query:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        SKIPMEVNPTDN+G+LKKEL+KLQQR+ FHLPPEGFFFIYDRDVMDEDRS RWHGVAH DTIEIFNG+++ GS
Subjt:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

XP_022972905.1 ubiquitin domain-containing protein 7SL RNA2-like [Cucurbita maxima]2.6e-3091.78Show/hide
Query:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        SKIPMEV+PTDN+GKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRS RWHGVAHSD+IEIFNGSVS  S
Subjt:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

XP_023543067.1 biquitin domain-containing protein 7SL RNA1-like [Cucurbita pepo subsp. pepo]3.7e-2957.86Show/hide
Query:  MLQPNASLADLQDQH--------DNAAAVVAADDNDNDNDDDSGCDGGNEWVVEEQVESNGATEIWESKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPP
        MLQ NAS  +LQDQ         +N+   V    +   +    G   G+    + +++     +   SKIPMEVNPTDN+G+LKKELQKLQQRLHFHLPP
Subjt:  MLQPNASLADLQDQH--------DNAAAVVAADDNDNDNDDDSGCDGGNEWVVEEQVESNGATEIWESKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPP

Query:  EGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        EGFFFIYDRDVMDEDRS RWHGVA  DTIEIFNGSVS GS
Subjt:  EGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

TrEMBL top hitse value%identityAlignment
A0A1S3AZZ9 uncharacterized protein LOC1034845902.4e-2984.93Show/hide
Query:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        SKIPMEVNPTDN+G+LKKEL+KLQQR+ FHLPPEGFFFIYDRDVMDEDRS RWHGVAH DTIEIFNG+++ GS
Subjt:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

A0A6J1CMB8 actin-related protein 8-like1.5e-2887.5Show/hide
Query:  KIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        KIPMEVN +DN+G+LKKELQKLQQRLHFHLP EGFFFIYDRDVMDEDRS RWHGVAH DTIEIFNGSV+ GS
Subjt:  KIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

A0A6J1GE65 biquitin domain-containing protein 7SL RNA1-like9.0e-2958.16Show/hide
Query:  MLQPN-ASLADLQDQH--------DNAAAVVAADDNDNDNDDDSGCDGGNEWVVEEQVESNGATEIWESKIPMEVNPTDNMGKLKKELQKLQQRLHFHLP
        MLQ N AS  +LQDQ         +N+   V    +   +    G   G+    + +++     +   SKIPMEVNPTDN+G+LKKELQKLQQRLHFHLP
Subjt:  MLQPN-ASLADLQDQH--------DNAAAVVAADDNDNDNDDDSGCDGGNEWVVEEQVESNGATEIWESKIPMEVNPTDNMGKLKKELQKLQQRLHFHLP

Query:  PEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        PEGFFFIYDRDVMDEDRS RWHGVAH DTIEIFNGSVS GS
Subjt:  PEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

A0A6J1I9Y4 ubiquitin domain-containing protein 7SL RNA2-like1.3e-3091.78Show/hide
Query:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        SKIPMEV+PTDN+GKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRS RWHGVAHSD+IEIFNGSVS  S
Subjt:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

A0A6J1IPZ4 biquitin domain-containing protein 7SL RNA1-like5.3e-2955.41Show/hide
Query:  MLQPNASLADLQDQHDNAAAVVAADDNDNDNDDDSGCDGGNEWV----------------VEEQVESNGATEIWESKIPMEVNPTDNMGKLKKELQKLQQ
        MLQ NAS  +LQDQ          D   ++N +   C   +  V                 + +++     +   SKIPMEVNPTDN+G+LKKELQKLQQ
Subjt:  MLQPNASLADLQDQHDNAAAVVAADDNDNDNDDDSGCDGGNEWV----------------VEEQVESNGATEIWESKIPMEVNPTDNMGKLKKELQKLQQ

Query:  RLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        RLHFHLPPEGFFFIYDRDVMDEDRS RWHGVAH DTIEIFNGSVS GS
Subjt:  RLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVSSGS

SwissProt top hitse value%identityAlignment
Q9ZQZ6 Ubiquitin domain-containing protein 7SL RNA22.7e-0641.94Show/hide
Query:  IPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEI
        I +EVN  DN+ +L+KEL K+Q+R   +LP E F  +     + E +S +W+ VA  DTIE+
Subjt:  IPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEI

Q9ZT95 Ubiquitin domain-containing protein 7SL RNA11.2e-0643.55Show/hide
Query:  IPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEI
        I +EVN  DN+ +L+KEL K+Q+R   +LP E F  +     + E +S +W+ VA  DTIEI
Subjt:  IPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEI

Arabidopsis top hitse value%identityAlignment
AT2G32350.1 Ubiquitin-like superfamily protein4.3e-0732.86Show/hide
Query:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVS
        ++IP+E+  T  + ++++ LQ  +      LP + + F++ + +M E+ S+RWHGV + DT+ +F GS+S
Subjt:  SKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVS

AT4G03350.1 ubiquitin family protein1.9e-0741.94Show/hide
Query:  IPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEI
        I +EVN  DN+ +L+KEL K+Q+R   +LP E F  +     + E +S +W+ VA  DTIE+
Subjt:  IPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEI

AT4G03360.1 Ubiquitin family protein1.2e-0640.58Show/hide
Query:  IPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFI--YDRDVMDEDRSVRWHGVAHSDTIEIFNGSV
        I +EV   DN+ +L+KEL K+Q+R   +LP   ++ I  + + V+ ED+S   +GVA+ DTI+I  G V
Subjt:  IPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFI--YDRDVMDEDRSVRWHGVAHSDTIEIFNGSV

AT4G03370.1 Ubiquitin family protein7.5e-1250.72Show/hide
Query:  KIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVS
        +I +EVN   N+  L+KEL K+Q+R   +LP EGFFFI+ +DV+ ED+S   + VA  DTIEIF G V+
Subjt:  KIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSVRWHGVAHSDTIEIFNGSVS

AT4G05230.1 Ubiquitin-like superfamily protein2.2e-1942.31Show/hide
Query:  QPNASLADLQDQHDNAAAVVAADDNDNDNDDDSGCDGGNEWVVEEQVESNGATEIWESKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRD
        Q N++       H++   +  +++N+N+N             +   V     T     KIP++VN  DN+G+L+KEL K+QQR    LP EG+FFIY ++
Subjt:  QPNASLADLQDQHDNAAAVVAADDNDNDNDDDSGCDGGNEWVVEEQVESNGATEIWESKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRD

Query:  VMDEDRSVRWHGVAHSDTIEIFNGSVSSGS
        VMDE+RS RWH V   DTIEIFNGSVS GS
Subjt:  VMDEDRSVRWHGVAHSDTIEIFNGSVSSGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCAACCCAACGCCTCCCTTGCCGACTTACAGGATCAACATGACAACGCTGCCGCCGTCGTAGCCGCCGACGACAACGACAATGACAACGACGACGACAGTGGCTG
TGACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAATCAAAGATACCAATGGAAGTGAACCCAACGGATAACATGGGGA
AATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTACATTTTCATCTGCCACCAGAGGGTTTCTTTTTCATTTATGACCGCGACGTTATGGACGAAGACCGCTCCGTC
CGTTGGCATGGTGTGGCCCACAGTGATACCATTGAGATCTTCAATGGCAGCGTTTCTAGCGGATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCAACCCAACGCCTCCCTTGCCGACTTACAGGATCAACATGACAACGCTGCCGCCGTCGTAGCCGCCGACGACAACGACAATGACAACGACGACGACAGTGGCTG
TGACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAATCAAAGATACCAATGGAAGTGAACCCAACGGATAACATGGGGA
AATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTACATTTTCATCTGCCACCAGAGGGTTTCTTTTTCATTTATGACCGCGACGTTATGGACGAAGACCGCTCCGTC
CGTTGGCATGGTGTGGCCCACAGTGATACCATTGAGATCTTCAATGGCAGCGTTTCTAGCGGATCTTAA
Protein sequenceShow/hide protein sequence
MLQPNASLADLQDQHDNAAAVVAADDNDNDNDDDSGCDGGNEWVVEEQVESNGATEIWESKIPMEVNPTDNMGKLKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSV
RWHGVAHSDTIEIFNGSVSSGS