; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G008530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G008530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionexopolygalacturonase-like
Genome locationCmo_Chr05:5436446..5437796
RNA-Seq ExpressionCmoCh05G008530
SyntenyCmoCh05G008530
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADP09681.1 polygalacturonase [Cucurbita pepo]1.2e-13776.09Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNNDEHY----------------KLLLP----------------------------------EGDGLLV
        MALIPLLLLLVSNAT  ATSGVFDITTFGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNNDEHY----------------KLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTLSGTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP NSPNTDGI+LGDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNT IATGDDCISVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEM+NVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPSAIKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

XP_022929731.1 exopolygalacturonase-like [Cucurbita moschata]2.0e-13775.8Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV
        MALIPLLLLLVSNATADATSGVFDIT FGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTL+GTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP NSPNTDGI++GDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNT IATGDDCISVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEM+NVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPSAIKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

XP_022946596.1 exopolygalacturonase-like [Cucurbita moschata]5.2e-13875.8Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNNDEHY----------------KLLLP----------------------------------EGDGLLV
        MAL+PLLLLLVSNAT DATSGVFDITTFGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNNDEHY----------------KLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTL+GTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP NSPNTDGI+LGDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNT IATGDDC+SVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEMDNVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPSAIKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

XP_022972848.1 exopolygalacturonase-like [Cucurbita maxima]1.8e-13876.38Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV
        MALIPLLLLLVSNAT DATSGVFDITTFGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTLSGTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP++SPNTDGI+LGDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNTVIATGDDCISVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEMDNVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPS IKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

XP_022975421.1 exopolygalacturonase-like, partial [Cucurbita maxima]1.8e-13876.38Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV
        MALIPLLLLLVSNAT DATSGVFDITTFGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTLSGTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP++SPNTDGI+LGDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNTVIATGDDCISVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEMDNVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPS IKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

TrEMBL top hitse value%identityAlignment
A0A6J1ENZ5 exopolygalacturonase-like9.7e-13875.8Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV
        MALIPLLLLLVSNATADATSGVFDIT FGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTL+GTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP NSPNTDGI++GDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNT IATGDDCISVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEM+NVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPSAIKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

A0A6J1G454 exopolygalacturonase-like2.5e-13875.8Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNNDEHY----------------KLLLP----------------------------------EGDGLLV
        MAL+PLLLLLVSNAT DATSGVFDITTFGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNNDEHY----------------KLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTL+GTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP NSPNTDGI+LGDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNT IATGDDC+SVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEMDNVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPSAIKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

A0A6J1I9Y3 exopolygalacturonase-like8.7e-13976.38Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV
        MALIPLLLLLVSNAT DATSGVFDITTFGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTLSGTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP++SPNTDGI+LGDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNTVIATGDDCISVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEMDNVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPS IKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

A0A6J1IE44 exopolygalacturonase-like8.7e-13976.38Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV
        MALIPLLLLLVSNAT DATSGVFDITTFGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNND----------------EHYKLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTLSGTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP++SPNTDGI+LGDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNTVIATGDDCISVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEMDNVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPS IKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

E3VSV7 Polygalacturonase5.7e-13876.09Show/hide
Query:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNNDEHY----------------KLLLP----------------------------------EGDGLLV
        MALIPLLLLLVSNAT  ATSGVFDITTFGAKPN D                   K+L+P                                  EGDGLLV
Subjt:  MALIPLLLLLVSNATADATSGVFDITTFGAKPNNDEHY----------------KLLLP----------------------------------EGDGLLV

Query:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY
        MEY DHLTLSGTGVFDGQGKA WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKITAP NSPNTDGI+LGDSEDVY
Subjt:  MEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVY

Query:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID
        ILNT IATGDDCISVGYTNRKITISDVTCG GH ISIG LGKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEM+NVANPIIID
Subjt:  ILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID

Query:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK
        QEYCPWNQCNRKVPSAIKISKVSFKN RGTSST +   L   K
Subjt:  QEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVK

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)4.3e-7454.13Show/hide
Query:  EGDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKE-CKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIY
        +G G + +   D LT+ G GVFDGQGK+ W +NDCH     CK L MNL+   +TNSI++D+T+LDSKNFH+NV+  KNLTF+  KI+A + S NTDGI+
Subjt:  EGDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKE-CKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIY

Query:  LGDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDN
        +G S+ V I+NT I TGDDCIS+G  ++ I I+++TCG GH IS+G LG+YK E+ +VG+ VK C + G+ NGVRIK+W  S      S MHF+DI M++
Subjt:  LGDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDN

Query:  VANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR
        V  PI+IDQ YCP+NQC  +VPS++K+SK+SFKN +GTS+T+
Subjt:  VANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR

P35337 Polygalacturonase1.4e-7754.39Show/hide
Query:  DGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGD
        D  +V E  +   L+G G FDG+G A W+ N+CH   ECKKLP++++F+F+ N+ +KD+TSLD+KNFH NV++GKN+TFD++KI AP  SPNTDGI+LG 
Subjt:  DGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGD

Query:  SEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVAN
         E V ILNT IATGDDCISVG   + + I  V CG GH IS+G LG+Y  E+++  +TVK C L GT+NG+RIK+W  +A +   + +HFEDI ++ V+N
Subjt:  SEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVAN

Query:  PIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR
        PI+IDQEYCPWNQCN+  PS IK+  ++F+N RGTS  +
Subjt:  PIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR

Q39766 Polygalacturonase3.9e-6750.44Show/hide
Query:  DHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNT
        ++  + G G+FDGQG   +EKN C  ++   KLP+N++F+F+TN++++DITS DSK FHINV   KN+T + LKI APD SPNTDGI++G SE V I+ +
Subjt:  DHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNT

Query:  VIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQEYC
         I TGDDCIS+G   + + I ++TCG GH ISIG LGK++ E+ + G+ +  C +  T+NG RIK+W         S +HFEDI M+NV++PI+IDQ+YC
Subjt:  VIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQEYC

Query:  PWNQCNRKVPSAIKISKVSFKNFRGTSS
        PWN+C +   S +K+S +SFKN RGTS+
Subjt:  PWNQCNRKVPSAIKISKVSFKNFRGTSS

Q40312 Polygalacturonase1.9e-7446.75Show/hide
Query:  ATSGVFDITTFGAKPNND----------------EHYKLLLPEG---------------------DGLLVME----------------YFDHLTLSGTGV
        A SGV DI+ FG KPN+D                   K+++P G                     DG +                   Y DHLTLSG GV
Subjt:  ATSGVFDITTFGAKPNND----------------EHYKLLLPEG---------------------DGLLVME----------------YFDHLTLSGTGV

Query:  FDGQGKACWEK----NDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGD
        FDGQG   ++K    +    K    K+ MN  FNF+ NSIV+ +TS DSKNFH+ V   KN+TFD   ITAP +SPNTDGI++G S DV ILNT I TGD
Subjt:  FDGQGKACWEK----NDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGD

Query:  DCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCN
        DC+S+G  +++IT+  V CG GH +S+G LGK+ TE+ + G+TVK C L  T NGVRIK+W D+  +   S++HFEDI M NV NP+IIDQEY PWNQC+
Subjt:  DCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCN

Query:  RKVPSAIKISKVSFKNFRGTSST
        +K PS IK+SK+SFKN +GTS T
Subjt:  RKVPSAIKISKVSFKNFRGTSST

Q6H9K0 Exopolygalacturonase (Fragment)1.5e-7152.07Show/hide
Query:  EGDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYL
        + DG +     D LT+SGTG  DGQG+  W KN+C     CK   MNL+F+F+ +++V+DITSL+SK FHINVL  +++TF H+ +TAP  S NTDGI++
Subjt:  EGDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYL

Query:  GDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNV
        G S+ V I NT IATGDDCIS+G  ++ +TI+ V CG GH ISIG LG+Y  EKE+ G+TVK C   GT NGVR+K+W +S     T ++ F+D+ M+NV
Subjt:  GDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNV

Query:  ANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRL
         NP+I+DQEYCP+ QC+R+ PS IK+S ++F N RGTS+ ++
Subjt:  ANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRL

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein3.9e-7553.81Show/hide
Query:  LVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSED
        +V    D   L+G G FDG+G A W  N+CH   ECKKLP++++F+FI NS ++DI+S+D+KNFHINVL  KN+T +++KI AP++SPNTDGI+LG S+ 
Subjt:  LVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSED

Query:  VYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPII
        V ILN+ I+TGDDCISVG   + + +  VTCG GH IS+G LG+Y  E+++ G+ V  C L  T NG+RIK+W  +A S   S++HFEDI + +V+NPI+
Subjt:  VYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPII

Query:  IDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR
        IDQEYCPWNQCN++  S IK+  +SFKN RGTS  +
Subjt:  IDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR

AT3G07830.1 Pectin lyase-like superfamily protein4.4e-7452.12Show/hide
Query:  LVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSED
        +V +  D   L+G G FDG+G A W  N+CH   ECKKLP++++F+F+TN+ ++DI+S+D+KNFHINV+  KN+TFD++KI AP  SPNTDGI+LG S  
Subjt:  LVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSED

Query:  VYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPII
        V I+N+ I+TGDDC+SVG     + + +V CG GH IS+G LG+Y  E+++ G+ V  C L  T NG+RIK+W  +A S   SN+HFE+I + NV+NPI+
Subjt:  VYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPII

Query:  IDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR
        IDQEYCPWNQCN++  S+IK++ +SF+  RGTS  +
Subjt:  IDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR

AT3G07840.1 Pectin lyase-like superfamily protein2.5e-7756.19Show/hide
Query:  LSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIAT
        L+G G+FDG+G A W  N+CH   ECKKLP++++F+F+ N+ ++DI+S+D+KNFHINVL  KN+TFD++K+ AP  SPNTDGI+LG SE V ILN+ IAT
Subjt:  LSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIAT

Query:  GDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQ
        GDDCISVG   + + + +V CG GH IS+G LG+Y  E+++ G+TV  C L GT NG+RIK+W  +A +   S +HFE+I ++NV+NPI+IDQEYCPWNQ
Subjt:  GDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQ

Query:  CNRKVPSAIKISKVSFKNFRGTSSTR
        CN++ PS IK+  +SFKN RGTS  +
Subjt:  CNRKVPSAIKISKVSFKNFRGTSSTR

AT4G18180.1 Pectin lyase-like superfamily protein3.7e-6548.54Show/hide
Query:  GDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLG
        G G +   + + LTL+G G FDGQG   W  N+C     CK LP +LKF  +  ++V+ I+S++SK FHI ++  ++     L ITAP +SPNTDGI++ 
Subjt:  GDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLG

Query:  DSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVA
         S +VY   + IATGDDC+S+G  N +ITI+ + CG GH IS+G LG+Y  EK++ G+ VK CK+ GTTNG+RIK+W++S      +NM FE+I M+NV 
Subjt:  DSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVA

Query:  NPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSST
        NPIIIDQ YCP++ C   VPS +++S++ FKN RGTSS+
Subjt:  NPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSST

AT5G48140.1 Pectin lyase-like superfamily protein4.1e-7252.21Show/hide
Query:  LSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIAT
        L+G GVFDG+G A W  N+CH    CKKLP++++F+F+T++ ++ ITSLD+K+FHINV+  KN+TF+ +KI AP  SPNTDGI++G S+ + I+N+ I+T
Subjt:  LSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIAT

Query:  GDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQ
        GDDC+SVG   + + +  VTCG GH ISIG LG+Y  E+ + G+ +  C L  T NG+RIK+W  +A +   S++HFE+I + NV+NPI+IDQEYCPWNQ
Subjt:  GDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQ

Query:  CNRKVPSAIKISKVSFKNFRGTSSTR
        CN++ PS IK++ +SFK  RGTS  +
Subjt:  CNRKVPSAIKISKVSFKNFRGTSSTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTAATACCACTGTTGCTATTGTTGGTGTCTAATGCTACCGCTGATGCTACTAGCGGTGTTTTTGATATTACGACATTTGGTGCCAAACCTAATAATGATGAACA
TTACAAGCTTCTCCTACCGGAAGGAGATGGGTTGCTTGTTATGGAATACTTCGATCATTTGACATTGTCTGGTACTGGAGTTTTCGATGGCCAAGGAAAAGCTTGTTGGG
AAAAGAATGATTGCCACATGAAGAAAGAATGCAAAAAGCTTCCCATGAATTTGAAGTTCAATTTCATCACAAATTCGATAGTGAAGGACATAACTTCATTGGATAGCAAG
AATTTTCATATCAATGTTTTGACGGGCAAGAATCTTACCTTCGATCACCTGAAAATTACTGCACCAGACAATAGTCCCAACACCGATGGAATTTACTTGGGCGATTCAGA
AGACGTTTACATTCTCAATACCGTAATCGCAACGGGAGATGATTGTATATCTGTAGGATACACTAACAGAAAAATAACCATTAGTGATGTTACTTGCGGACAGGGACATG
ACATTAGCATAGGCAGGTTGGGCAAGTATAAAACTGAAAAAGAACTGGTAGGAGTTACCGTGAAGAAATGCAAATTAATCGGTACTACAAATGGTGTCAGGATCAAATCA
TGGTCAGATTCGGCCGTCTCATACCCAACCTCTAACATGCATTTTGAAGATATTGAAATGGATAATGTTGCTAACCCTATCATCATAGATCAAGAATATTGTCCATGGAA
TCAATGCAACCGAAAGGTTCCATCAGCAATTAAGATTAGCAAAGTTAGTTTCAAGAACTTCAGGGGCACATCTTCAACTCGGTTGCAGTCAAGCTTGTTTGCAGTAAAAG
TAATCCATGTGAGGATGTGGAATTTCCTGATATTGACCTCACTTATAGTGGTAAAGAAGGGTCAATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATTAATACCACTGTTGCTATTGTTGGTGTCTAATGCTACCGCTGATGCTACTAGCGGTGTTTTTGATATTACGACATTTGGTGCCAAACCTAATAATGATGAACA
TTACAAGCTTCTCCTACCGGAAGGAGATGGGTTGCTTGTTATGGAATACTTCGATCATTTGACATTGTCTGGTACTGGAGTTTTCGATGGCCAAGGAAAAGCTTGTTGGG
AAAAGAATGATTGCCACATGAAGAAAGAATGCAAAAAGCTTCCCATGAATTTGAAGTTCAATTTCATCACAAATTCGATAGTGAAGGACATAACTTCATTGGATAGCAAG
AATTTTCATATCAATGTTTTGACGGGCAAGAATCTTACCTTCGATCACCTGAAAATTACTGCACCAGACAATAGTCCCAACACCGATGGAATTTACTTGGGCGATTCAGA
AGACGTTTACATTCTCAATACCGTAATCGCAACGGGAGATGATTGTATATCTGTAGGATACACTAACAGAAAAATAACCATTAGTGATGTTACTTGCGGACAGGGACATG
ACATTAGCATAGGCAGGTTGGGCAAGTATAAAACTGAAAAAGAACTGGTAGGAGTTACCGTGAAGAAATGCAAATTAATCGGTACTACAAATGGTGTCAGGATCAAATCA
TGGTCAGATTCGGCCGTCTCATACCCAACCTCTAACATGCATTTTGAAGATATTGAAATGGATAATGTTGCTAACCCTATCATCATAGATCAAGAATATTGTCCATGGAA
TCAATGCAACCGAAAGGTTCCATCAGCAATTAAGATTAGCAAAGTTAGTTTCAAGAACTTCAGGGGCACATCTTCAACTCGGTTGCAGTCAAGCTTGTTTGCAGTAAAAG
TAATCCATGTGAGGATGTGGAATTTCCTGATATTGACCTCACTTATAGTGGTAAAGAAGGGTCAATTGTGA
Protein sequenceShow/hide protein sequence
MALIPLLLLLVSNATADATSGVFDITTFGAKPNNDEHYKLLLPEGDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSK
NFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKS
WSDSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTRLQSSLFAVKVIHVRMWNFLILTSLIVVKKGQL