; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G008690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G008690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionphotosynthetic NDH subunit of lumenal location 2, chloroplastic
Genome locationCmo_Chr05:5766435..5767622
RNA-Seq ExpressionCmoCh05G008690
SyntenyCmoCh05G008690
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598987.1 Photosynthetic NDH subunit of lumenal location 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.2e-9599.45Show/hide
Query:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
        MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSI RRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
Subjt:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML

Query:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
Subjt:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

XP_022946003.1 photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucurbita moschata]3.8e-96100Show/hide
Query:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
        MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
Subjt:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML

Query:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
Subjt:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

XP_022972860.1 photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucurbita maxima]2.1e-9497.81Show/hide
Query:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
        MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSI RRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYF+PGLSGEEAVARIRQTAEGLHSIRDML
Subjt:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML

Query:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQN+YVKTANELVDNMAELDYY+RTPKVYESYLYYEKTLKSMDDLVAILA
Subjt:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

XP_023545788.1 photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucurbita pepo subsp. pepo]9.3e-9598.91Show/hide
Query:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
        MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSI RRHIATALALV GLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
Subjt:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML

Query:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
Subjt:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

XP_038880767.1 photosynthetic NDH subunit of lumenal location 2, chloroplastic [Benincasa hispida]1.4e-8287.1Show/hide
Query:  MPAFANATTLFSSRIPTPHRC---HRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIR
        M +FANA TLF SRI TPH+C    RH FPII+ASLSIHRRHIATALA V+GLQA AP ALAQ+WGTHSFIKERYFEPGLS EEAVARI+QTAEGLHSIR
Subjt:  MPAFANATTLFSSRIPTPHRC---HRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIR

Query:  DMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        +MLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQN++VKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKS+DDLVA+LA
Subjt:  DMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

TrEMBL top hitse value%identityAlignment
A0A0A0L3W3 Uncharacterized protein2.5e-7783.96Show/hide
Query:  MPAFANA--TTLFSSRIPTPHRC-HRHPFPIISASLSIHRRHIATALALVVGLQAAAP-PALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSI
        MP  ANA   TLFSSRI TPH+  HR  FP+I+ASL IHRRHIAT LALVVGLQAA P  ALAQ+WGTHSFIKERYFEPGLS EEAVARI+QTAEGLHSI
Subjt:  MPAFANA--TTLFSSRIPTPHRC-HRHPFPIISASLSIHRRHIATALALVVGLQAAAP-PALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSI

Query:  RDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        R+MLET SWRYVIFYIRLKSAYLSQDLKTAM+ LPQAR+N++VKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKS+DDLVA+LA
Subjt:  RDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

A0A1S3AVQ2 photosynthetic NDH subunit of lumenal location 2, chloroplastic1.2e-7684.53Show/hide
Query:  ANA-TTLFSSRIPTPHR-CHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLET
        ANA +TLFSS I TPH+  HR  FPII+ASL IHRRHIAT LA+V+GLQAA P ALAQ+WGTHSFIKERYFEPGLS +EAVARI+QTAEGLHSIR+MLET
Subjt:  ANA-TTLFSSRIPTPHR-CHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLET

Query:  MSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
         SWRYVIFYIRLKSAYLSQDLKTAM+ LPQARQN++VKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKS+DDLVA+LA
Subjt:  MSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

A0A5D3DC39 Photosynthetic NDH subunit of lumenal location 21.2e-7684.53Show/hide
Query:  ANA-TTLFSSRIPTPHR-CHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLET
        ANA +TLFSS I TPH+  HR  FPII+ASL IHRRHIAT LA+V+GLQAA P ALAQ+WGTHSFIKERYFEPGLS +EAVARI+QTAEGLHSIR+MLET
Subjt:  ANA-TTLFSSRIPTPHR-CHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLET

Query:  MSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
         SWRYVIFYIRLKSAYLSQDLKTAM+ LPQARQN++VKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKS+DDLVA+LA
Subjt:  MSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

A0A6J1G2K7 photosynthetic NDH subunit of lumenal location 2, chloroplastic1.8e-96100Show/hide
Query:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
        MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
Subjt:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML

Query:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
Subjt:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

A0A6J1I9U1 photosynthetic NDH subunit of lumenal location 2, chloroplastic1.0e-9497.81Show/hide
Query:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML
        MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSI RRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYF+PGLSGEEAVARIRQTAEGLHSIRDML
Subjt:  MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDML

Query:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQN+YVKTANELVDNMAELDYY+RTPKVYESYLYYEKTLKSMDDLVAILA
Subjt:  ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

SwissProt top hitse value%identityAlignment
P12301 Oxygen-evolving enhancer protein 3, chloroplastic4.4e-0724.17Show/hide
Query:  GTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVY
        GT  + K+R++   L   EA  R + +A  + +++  ++  +W  +   +RL+++YL  DLKT +S  P+  +    +  ++L  ++  LD+  +     
Subjt:  GTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVY

Query:  ESYLYYEKTLKSMDDLVAIL
        E+  YY +T+ ++++++A L
Subjt:  ESYLYYEKTLKSMDDLVAIL

Q41048 Oxygen-evolving enhancer protein 3-1, chloroplastic2.3e-0826.09Show/hide
Query:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY
        +KER++   L   EA AR++ +A+ + +++ +++  +W YV   +RL+++YL  DLKT ++  P+  +    +   +L   + +LD+  +     E+  Y
Subjt:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY

Query:  YEKTLKSMDDLVAIL
        +  T  ++ D++A L
Subjt:  YEKTLKSMDDLVAIL

Q41806 Oxygen-evolving enhancer protein 3-2, chloroplastic8.1e-0926.96Show/hide
Query:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY
        +KER++   L   EAVAR++ +A+ + +++ +++  +W YV   +RL+++YL  DLKT ++  P+  +    +   +L   + +LD+  +     E+  Y
Subjt:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY

Query:  YEKTLKSMDDLVAIL
        +  T  ++ D++A L
Subjt:  YEKTLKSMDDLVAIL

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic2.3e-0826.09Show/hide
Query:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY
        +K+R++   L   EA AR +++A+ + +++ +++  +W YV   +R K++YL  DL T +S  P+  +        +L D +  LDY  +     ++  Y
Subjt:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY

Query:  YEKTLKSMDDLVAIL
        Y +T+ ++++++A L
Subjt:  YEKTLKSMDDLVAIL

Q9XI73 Photosynthetic NDH subunit of lumenal location 2, chloroplastic3.6e-4960.23Show/hide
Query:  HRCHRHPFPIISASLS-----IHRRHIATALALVVGLQAAAPPALAQ-TWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYI
        HR    PF ++  +         RR   T+L     +  A   ALAQ  WGT SFIKE+YF PGLS E+A ARI+QTAEGL  +R+ML+ MSWRYVIFYI
Subjt:  HRCHRHPFPIISASLS-----IHRRHIATALALVVGLQAAAPPALAQ-TWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYI

Query:  RLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        RLK AYLSQDL  AM++LP++R+N+YV+ ANELV+NM+ELD+YVRTPKVYESYLYYEKTLKS+D++V  LA
Subjt:  RLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

Arabidopsis top hitse value%identityAlignment
AT1G14150.1 PsbQ-like 22.5e-5060.23Show/hide
Query:  HRCHRHPFPIISASLS-----IHRRHIATALALVVGLQAAAPPALAQ-TWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYI
        HR    PF ++  +         RR   T+L     +  A   ALAQ  WGT SFIKE+YF PGLS E+A ARI+QTAEGL  +R+ML+ MSWRYVIFYI
Subjt:  HRCHRHPFPIISASLS-----IHRRHIATALALVVGLQAAAPPALAQ-TWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYI

Query:  RLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA
        RLK AYLSQDL  AM++LP++R+N+YV+ ANELV+NM+ELD+YVRTPKVYESYLYYEKTLKS+D++V  LA
Subjt:  RLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA

AT1G14150.2 PsbQ-like 28.8e-3555Show/hide
Query:  HRCHRHPFPIISASLS-----IHRRHIATALALVVGLQAAAPPALAQ-TWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYI
        HR    PF ++  +         RR   T+L     +  A   ALAQ  WGT SFIKE+YF PGLS E+A ARI+QTAEGL  +R+ML+ MSWRYVIFYI
Subjt:  HRCHRHPFPIISASLS-----IHRRHIATALALVVGLQAAAPPALAQ-TWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYI

Query:  RLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAEL
        RLK AYLSQDL  AM++LP++R+N+YV+ ANELV+NM+E+
Subjt:  RLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAEL

AT3G01440.1 PsbQ-like 13.8e-0624.79Show/hide
Query:  GTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVY
        GT +FIK+  +   +  +  + R+++ A  L ++ D++   +  YV  Y+RLKS +L  D    +S      +      AN L DN  +L+   +T  + 
Subjt:  GTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVY

Query:  ESYLYYEKTLKSMDDLVAILA
        E+   Y+ T   + +++  +A
Subjt:  ESYLYYEKTLKSMDDLVAILA

AT4G21280.1 photosystem II subunit QA1.7e-0926.09Show/hide
Query:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY
        +K+R++   L   EA AR +++A+ + +++ +++  +W YV   +R K++YL  DL T +S  P+  +        +L D +  LDY  +     ++  Y
Subjt:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY

Query:  YEKTLKSMDDLVAIL
        Y +T+ ++++++A L
Subjt:  YEKTLKSMDDLVAIL

AT4G21280.2 photosystem II subunit QA1.7e-0926.09Show/hide
Query:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY
        +K+R++   L   EA AR +++A+ + +++ +++  +W YV   +R K++YL  DL T +S  P+  +        +L D +  LDY  +     ++  Y
Subjt:  IKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLY

Query:  YEKTLKSMDDLVAIL
        Y +T+ ++++++A L
Subjt:  YEKTLKSMDDLVAIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCCTTCGCCAACGCCACCACGCTCTTCTCCTCTCGCATTCCCACTCCCCACAGATGCCACCGCCATCCCTTCCCCATCATCTCCGCCTCCCTTTCCATCCACCG
CCGCCACATCGCGACCGCCCTCGCACTGGTGGTCGGGCTGCAGGCTGCAGCACCTCCCGCGCTGGCCCAGACCTGGGGCACCCACTCATTCATTAAGGAGAGATACTTCG
AGCCGGGGCTGTCGGGGGAGGAGGCAGTGGCAAGGATAAGGCAGACGGCGGAGGGACTCCACAGCATCCGCGACATGCTGGAGACGATGTCGTGGAGGTATGTCATCTTC
TACATTCGTCTCAAGTCGGCTTATCTCTCCCAAGACTTGAAAACTGCCATGTCCGTTTTGCCCCAAGCTCGCCAAAATGAGTATGTTAAGACTGCTAATGAGTTGGTCGA
TAACATGGCCGAGTTGGATTACTACGTTCGCACACCCAAGGTGTATGAGTCGTATTTGTATTACGAAAAGACACTCAAATCCATGGATGATCTGGTGGCCATACTAGCAT
AG
mRNA sequenceShow/hide mRNA sequence
AGGCCACAAAGTGTGTGTGTTTTTCCATAAGGAAATTAAAGTTTATCCAAAGCCATGCCTGCCTTCGCCAACGCCACCACGCTCTTCTCCTCTCGCATTCCCACTCCCCA
CAGATGCCACCGCCATCCCTTCCCCATCATCTCCGCCTCCCTTTCCATCCACCGCCGCCACATCGCGACCGCCCTCGCACTGGTGGTCGGGCTGCAGGCTGCAGCACCTC
CCGCGCTGGCCCAGACCTGGGGCACCCACTCATTCATTAAGGAGAGATACTTCGAGCCGGGGCTGTCGGGGGAGGAGGCAGTGGCAAGGATAAGGCAGACGGCGGAGGGA
CTCCACAGCATCCGCGACATGCTGGAGACGATGTCGTGGAGGTATGTCATCTTCTACATTCGTCTCAAGTCGGCTTATCTCTCCCAAGACTTGAAAACTGCCATGTCCGT
TTTGCCCCAAGCTCGCCAAAATGAGTATGTTAAGACTGCTAATGAGTTGGTCGATAACATGGCCGAGTTGGATTACTACGTTCGCACACCCAAGGTGTATGAGTCGTATT
TGTATTACGAAAAGACACTCAAATCCATGGATGATCTGGTGGCCATACTAGCATAGCCTCAGTTATTAGCACTTAGGATTCATCAAAGGGAGGCCTCATCTTCCATAAAT
TACTGTACATTTGGATGTTAACAGTCTTATTACAAATACATATGTAAAATTTGTTTATTGGACAGTAATAATATGCCTAAAATCTTTTAATCTTATCATTTGTTTAAAAA
AGTACTTAGGTTTAATATATATATATATATATATATATATGAAAAAAAT
Protein sequenceShow/hide protein sequence
MPAFANATTLFSSRIPTPHRCHRHPFPIISASLSIHRRHIATALALVVGLQAAAPPALAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIF
YIRLKSAYLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDDLVAILA