CuGenDBv2

Gene ID	CmoCh05G008730
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	origin of replication complex subunit 6
Genome location	Cmo_Chr05:5813224..5813616
RNA-Seq Expression	CmoCh05G008730
Synteny	CmoCh05G008730
Gene Ontology terms	GO:0006270 - DNA replication initiation (biological process) GO:0008610 - lipid biosynthetic process (biological process) GO:0005664 - nuclear origin of replication recognition complex (cellular component) GO:0016020 - membrane (cellular component) GO:0003677 - DNA binding (molecular function) GO:0005506 - iron ion binding (molecular function) GO:0016491 - oxidoreductase activity (molecular function)
InterPro domains	IPR008721 - Origin recognition complex, subunit 6 IPR020529 - Origin recognition complex, subunit 6, metazoa/plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6598989.1 putative methyltransferase PMT2, partial [Cucurbita argyrosperma subsp. sororia]

5.0e-21

98.28

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG
        MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR G
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG

KAG7029958.1 Origin of replication complex subunit 6 [Cucurbita argyrosperma subsp. argyrosperma]

5.0e-21

98.28

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG
        MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR G
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG

XP_022946231.1 origin of replication complex subunit 6 [Cucurbita moschata]

5.0e-21

98.28

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG
        MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR G
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG

XP_022972855.1 origin of replication complex subunit 6 [Cucurbita maxima]

5.0e-21

98.28

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG
        MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR G
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG

XP_023545883.1 origin of replication complex subunit 6 [Cucurbita pepo subsp. pepo]

5.0e-21

98.28

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG
        MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR G
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKW3 Uncharacterized protein

1.3e-17

83.05

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCGF
        MD   +ARKLDL+DSE+L RKAGEFRRLSDL FNSS IGVGEVCKAIICLEIAATR GF
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCGF

A0A5A7SMQ3 Origin of replication complex subunit 6

4.0e-16

79.31

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG
        MD   IARKLDL+DSE+L RKAGE RRLSDL FNSS IG+GEVCKA+ICLEIAATR G
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG

A0A6J1DR65 origin of replication complex subunit 6

2.4e-16

82.76

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG
        MDLS IARKL+LSDSE L RKAGE RRLSDL  NSS IGVGEVCKA+ICLEIAATR G
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG

A0A6J1G325 origin of replication complex subunit 6

2.4e-21

98.28

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG
        MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR G
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG

A0A6J1I9T7 origin of replication complex subunit 6

2.4e-21

98.28

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG
        MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR G
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCG

SwissProt top hits

e value

%identity

Alignment

A2YNY4 Origin of replication complex subunit 6

9.9e-12

60.71

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR
        MD+S IA +L LS S  +  KA E RRL D+ F+SS +G+GEVCKAIICLEIAA++
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR

Q8GSL4 Origin of replication complex subunit 6

1.5e-12

62.5

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR
        MD+S IA +L LS S  + RKA E RRL D+ F+SS +G+GEVCKAIICLEIAA++
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR

Q9ZVH3 Origin of replication complex subunit 6

3.6e-14

67.86

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR
        MD+S I RKL L +++ L RKA E RRL D QF+SS IGVGE+CKA+ICLEIAATR
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR

Arabidopsis top hits

e value

%identity

Alignment

AT1G26840.1 origin recognition complex protein 6

2.6e-15

67.86

Show/hide

Query:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR
        MD+S I RKL L +++ L RKA E RRL D QF+SS IGVGE+CKA+ICLEIAATR
Subjt:  MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATCTCTCCAAGATTGCCAGGAAGCTCGATCTTTCCGACTCCGAAACCCTCACCCGGAAAGCTGGGGAATTTCGTCGCCTCTCCGATCTCCAGTTCAATTCTTCCGC
TATTGGCGTTGGTGAGGTTTGCAAGGCCATAATCTGTTTGGAAATCGCCGCTACGAGGTGTGGTTTCGATTGGTGA

mRNA sequence

Show/hide mRNA sequence

TTTCTTCCCGCCTTCCCCCCTTCGTTTATCTACAACCTTCTTCCTCCATTACTGTCCAATCCTTCTGCGCTTCCAAGAATCCTTCCTTTTCTTCAATTTCCTCCCTCATG
GATCTCTCCAAGATTGCCAGGAAGCTCGATCTTTCCGACTCCGAAACCCTCACCCGGAAAGCTGGGGAATTTCGTCGCCTCTCCGATCTCCAGTTCAATTCTTCCGCTAT
TGGCGTTGGTGAGGTTTGCAAGGCCATAATCTGTTTGGAAATCGCCGCTACGAGGTGTGGTTTCGATTGGTGA

Protein sequence

Show/hide protein sequence

MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRCGFDW

CmoCh05G008730 (gene) of Cucurbita moschata (Rifu) v1 genome