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CmoCh05G008830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G008830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTIR-NBS-LRR disease resistance protein
Genome locationCmo_Chr05:5989292..5989763
RNA-Seq ExpressionCmoCh05G008830
SyntenyCmoCh05G008830
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
InterPro domainsIPR000157 - Toll/interleukin-1 receptor homology (TIR) domain
IPR035897 - Toll/interleukin-1 receptor homology (TIR) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599271.1 Disease resistance protein RPV1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2056.41Show/hide
Query:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD
        S ++   LS RGEDTR+N T HL       CVNVFI DKLERGEQISESLF+SI+G LISI            C +EL+KIIE KKSK+QKVLPIFY VD
Subjt:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD

Query:  LSIILKQMKKFWRSIGQ
         S I KQ + F  ++ +
Subjt:  LSIILKQMKKFWRSIGQ

XP_016901470.1 PREDICTED: LOW QUALITY PROTEIN: disease resistance protein RPP4-like [Cucumis melo]5.8e-1752Show/hide
Query:  SYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKV
        S TE      ++   LS RGEDTR+N T HL        VNVFI DKLERGEQISESLF+SI+  LISI            C +EL+KIIE KKSK Q V
Subjt:  SYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKV

Query:  LPIFYNVDLSIILKQMKKFWRSIGQ
        LPIFY VD S I KQ   F  ++ +
Subjt:  LPIFYNVDLSIILKQMKKFWRSIGQ

XP_022946292.1 toll/interleukin-1 receptor-like protein isoform X1 [Cucurbita moschata]1.9e-2056.41Show/hide
Query:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD
        S ++   LS RGEDTR+N T HL       CVNVFI DKLERGEQISESLF+SI+G LISI            C +EL+KIIE KKSK+QKVLPIFY VD
Subjt:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD

Query:  LSIILKQMKKFWRSIGQ
         S I KQ + F  ++ +
Subjt:  LSIILKQMKKFWRSIGQ

XP_022946293.1 toll/interleukin-1 receptor-like protein isoform X2 [Cucurbita moschata]1.9e-2056.41Show/hide
Query:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD
        S ++   LS RGEDTR+N T HL       CVNVFI DKLERGEQISESLF+SI+G LISI            C +EL+KIIE KKSK+QKVLPIFY VD
Subjt:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD

Query:  LSIILKQMKKFWRSIGQ
         S I KQ + F  ++ +
Subjt:  LSIILKQMKKFWRSIGQ

XP_022998960.1 toll/interleukin-1 receptor-like protein [Cucurbita maxima]6.6e-2155.56Show/hide
Query:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD
        S ++   LS RGEDTR+N T HL       CVNVFI DKLERGEQISESLFQSI+  LIS+            C +EL+KIIE KKSK+QKVLPIFYNVD
Subjt:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD

Query:  LSIILKQMKKFWRSIGQ
         ++I KQ  +F  ++ +
Subjt:  LSIILKQMKKFWRSIGQ

TrEMBL top hitse value%identityAlignment
A0A1S4E0G6 LOW QUALITY PROTEIN: disease resistance protein RPP4-like2.8e-1752Show/hide
Query:  SYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKV
        S TE      ++   LS RGEDTR+N T HL        VNVFI DKLERGEQISESLF+SI+  LISI            C +EL+KIIE KKSK Q V
Subjt:  SYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKV

Query:  LPIFYNVDLSIILKQMKKFWRSIGQ
        LPIFY VD S I KQ   F  ++ +
Subjt:  LPIFYNVDLSIILKQMKKFWRSIGQ

A0A6J1G3B9 toll/interleukin-1 receptor-like protein isoform X19.3e-2156.41Show/hide
Query:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD
        S ++   LS RGEDTR+N T HL       CVNVFI DKLERGEQISESLF+SI+G LISI            C +EL+KIIE KKSK+QKVLPIFY VD
Subjt:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD

Query:  LSIILKQMKKFWRSIGQ
         S I KQ + F  ++ +
Subjt:  LSIILKQMKKFWRSIGQ

A0A6J1G3E1 toll/interleukin-1 receptor-like protein isoform X29.3e-2156.41Show/hide
Query:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD
        S ++   LS RGEDTR+N T HL       CVNVFI DKLERGEQISESLF+SI+G LISI            C +EL+KIIE KKSK+QKVLPIFY VD
Subjt:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD

Query:  LSIILKQMKKFWRSIGQ
         S I KQ + F  ++ +
Subjt:  LSIILKQMKKFWRSIGQ

A0A6J1KDY7 toll/interleukin-1 receptor-like protein3.2e-2155.56Show/hide
Query:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD
        S ++   LS RGEDTR+N T HL       CVNVFI DKLERGEQISESLFQSI+  LIS+            C +EL+KIIE KKSK+QKVLPIFYNVD
Subjt:  SRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVD

Query:  LSIILKQMKKFWRSIGQ
         ++I KQ  +F  ++ +
Subjt:  LSIILKQMKKFWRSIGQ

E5GB34 TIR-NBS-LRR disease resistance protein2.8e-1752Show/hide
Query:  SYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKV
        S TE      ++   LS RGEDTR+N T HL        VNVFI DKLERGEQISESLF+SI+  LISI            C +EL+KIIE KKSK Q V
Subjt:  SYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKV

Query:  LPIFYNVDLSIILKQMKKFWRSIGQ
        LPIFY VD S I KQ   F  ++ +
Subjt:  LPIFYNVDLSIILKQMKKFWRSIGQ

SwissProt top hitse value%identityAlignment
F4JWM0 Disease resistance-like protein DSC22.5e-0728.08Show/hide
Query:  NKFQTQSKGNCLENAPTRILSYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI-----------
        +  ++ S  + L + P    S +  +  +  H+   S RGED R     H+        +  FI D+++RGE I   LFQ+I+   I+I           
Subjt:  NKFQTQSKGNCLENAPTRILSYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI-----------

Query:  -CSNELMKIIERKKSKNQKVLPIFYNVDLSIILKQMKKFWRSIGQT
         C NEL++I+  ++   Q V+ +FY VD S + KQ   F ++  +T
Subjt:  -CSNELMKIIERKKSKNQKVLPIFYNVDLSIILKQMKKFWRSIGQT

O23530 Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 11.1e-0731.54Show/hide
Query:  EVVRLSRAHKFDL--SSRGEDTRSNITIHLCVNV------FIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLP
        E+   S + ++D+  S RGED R +   HL   +      FI D++ER   I   L  +IK   I+I            C NEL++I +   + NQ V+P
Subjt:  EVVRLSRAHKFDL--SSRGEDTRSNITIHLCVNV------FIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLP

Query:  IFYNVDLSIILKQMKKFWRSIGQTSSLSSK
        IF++VD S + KQ  +F +   +T    S+
Subjt:  IFYNVDLSIILKQMKKFWRSIGQTSSLSSK

Q9SZ66 Disease resistance-like protein DSC13.9e-0839.42Show/hide
Query:  LSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVDLSIILKQ
        LS RG DTR+N T HL        ++ FI D+L RG+ ++ +LF  I+   I+I            C  EL+KI+E + S  Q V+PIFY VD S + KQ
Subjt:  LSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVDLSIILKQ

Query:  MKKF
           F
Subjt:  MKKF

V9M2S5 Disease resistance protein RPV13.0e-0835.48Show/hide
Query:  RILSYTEVVRLSRAHKFD--LSSRGEDTRSNITIHLC-------VNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKS
        R  S +    + R   +D  LS RGEDTR N T HL        +  F  D+L RGE I+  L ++I+    S+            C +EL+KI+E +K 
Subjt:  RILSYTEVVRLSRAHKFD--LSSRGEDTRSNITIHLC-------VNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKS

Query:  KNQKVLPIFYNVDLSIILKQMKKF
            V PIFY+VD S + KQ   F
Subjt:  KNQKVLPIFYNVDLSIILKQMKKF

V9M398 Disease resistance protein RUN11.9e-0739.25Show/hide
Query:  LSSRGEDTRSNITIHLC-------VNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIE---RKKSKNQKVLPIFYNVDLSII
        LS RGEDTR N T HL        +  F  DKL RGE I+  L ++I+    S+            C +EL+KI+E    KK     V PIFY+VD S +
Subjt:  LSSRGEDTRSNITIHLC-------VNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIE---RKKSKNQKVLPIFYNVDLSII

Query:  LKQMKKF
         KQ   F
Subjt:  LKQMKKF

Arabidopsis top hitse value%identityAlignment
AT4G12010.1 Disease resistance protein (TIR-NBS-LRR class) family2.8e-0939.42Show/hide
Query:  LSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVDLSIILKQ
        LS RG DTR+N T HL        ++ FI D+L RG+ ++ +LF  I+   I+I            C  EL+KI+E + S  Q V+PIFY VD S + KQ
Subjt:  LSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYNVDLSIILKQ

Query:  MKKF
           F
Subjt:  MKKF

AT4G16890.1 disease resistance protein (TIR-NBS-LRR class), putative8.1e-0931.54Show/hide
Query:  EVVRLSRAHKFDL--SSRGEDTRSNITIHLCVNV------FIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLP
        E+   S + ++D+  S RGED R +   HL   +      FI D++ER   I   L  +IK   I+I            C NEL++I +   + NQ V+P
Subjt:  EVVRLSRAHKFDL--SSRGEDTRSNITIHLCVNV------FIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLP

Query:  IFYNVDLSIILKQMKKFWRSIGQTSSLSSK
        IF++VD S + KQ  +F +   +T    S+
Subjt:  IFYNVDLSIILKQMKKFWRSIGQTSSLSSK

AT5G18370.1 Disease resistance protein (TIR-NBS-LRR class) family1.8e-0828.08Show/hide
Query:  NKFQTQSKGNCLENAPTRILSYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI-----------
        +  ++ S  + L + P    S +  +  +  H+   S RGED R     H+        +  FI D+++RGE I   LFQ+I+   I+I           
Subjt:  NKFQTQSKGNCLENAPTRILSYTEVVRLSRAHKFDLSSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI-----------

Query:  -CSNELMKIIERKKSKNQKVLPIFYNVDLSIILKQMKKFWRSIGQT
         C NEL++I+  ++   Q V+ +FY VD S + KQ   F ++  +T
Subjt:  -CSNELMKIIERKKSKNQKVLPIFYNVDLSIILKQMKKFWRSIGQT

AT5G51630.1 Disease resistance protein (TIR-NBS-LRR class) family4.0e-0834.51Show/hide
Query:  SRAHKFDL--SSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYN
        SR+  +D+  S  GED R +   HL        +N FI + +ER   I+  L  +I   +ISI            C NEL++I +  K   Q V+PIFY 
Subjt:  SRAHKFDL--SSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYN

Query:  VDLSIILKQMKKF
        VD S + KQ ++F
Subjt:  VDLSIILKQMKKF

AT5G51630.3 Disease resistance protein (TIR-NBS-LRR class) family4.0e-0834.51Show/hide
Query:  SRAHKFDL--SSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYN
        SR+  +D+  S  GED R +   HL        +N FI + +ER   I+  L  +I   +ISI            C NEL++I +  K   Q V+PIFY 
Subjt:  SRAHKFDL--SSRGEDTRSNITIHL-------CVNVFIADKLERGEQISESLFQSIKGVLISI------------CSNELMKIIERKKSKNQKVLPIFYN

Query:  VDLSIILKQMKKF
        VD S + KQ ++F
Subjt:  VDLSIILKQMKKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAACTCAAACAAATTTCAAACGCAAAGCAAAGGAAACTGTCTAGAAAATGCACCCACACGCATCCTCTCCTATACAGAAGTGGTCAGATTATCAAGAGCCCACAA
GTTTGATTTGAGTTCTAGAGGGGAGGATACTCGATCCAATATCACCATTCATCTTTGTGTCAACGTCTTCATAGCCGACAAGCTCGAAAGGGGTGAACAAATCTCTGAAT
CTCTTTTTCAATCTATAAAAGGAGTTTTGATCTCTATTTGTTCGAATGAATTGATGAAAATAATCGAACGTAAGAAATCTAAGAACCAGAAAGTTTTGCCAATTTTCTAT
AACGTGGATCTATCAATTATACTAAAACAAATGAAGAAGTTTTGGAGAAGCATTGGCCAAACATCAAGCTTGAGTTCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAACTCAAACAAATTTCAAACGCAAAGCAAAGGAAACTGTCTAGAAAATGCACCCACACGCATCCTCTCCTATACAGAAGTGGTCAGATTATCAAGAGCCCACAA
GTTTGATTTGAGTTCTAGAGGGGAGGATACTCGATCCAATATCACCATTCATCTTTGTGTCAACGTCTTCATAGCCGACAAGCTCGAAAGGGGTGAACAAATCTCTGAAT
CTCTTTTTCAATCTATAAAAGGAGTTTTGATCTCTATTTGTTCGAATGAATTGATGAAAATAATCGAACGTAAGAAATCTAAGAACCAGAAAGTTTTGCCAATTTTCTAT
AACGTGGATCTATCAATTATACTAAAACAAATGAAGAAGTTTTGGAGAAGCATTGGCCAAACATCAAGCTTGAGTTCAAAATGA
Protein sequenceShow/hide protein sequence
MNNSNKFQTQSKGNCLENAPTRILSYTEVVRLSRAHKFDLSSRGEDTRSNITIHLCVNVFIADKLERGEQISESLFQSIKGVLISICSNELMKIIERKKSKNQKVLPIFY
NVDLSIILKQMKKFWRSIGQTSSLSSK