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CmoCh05G009110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G009110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTMV resistance protein N-like
Genome locationCmo_Chr05:7011803..7013311
RNA-Seq ExpressionCmoCh05G009110
SyntenyCmoCh05G009110
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598998.1 Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1240.12Show/hide
Query:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------
        LPSCLHKFMS     LRNCKFLR+I  L Q +++MD +GCESLVRS DNVLDIISSKQ                                          
Subjt:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------

Query:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND
                                                AP STSEY WLVTTSSPTFSSSLVAND
Subjt:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND

XP_022946581.1 TMV resistance protein N-like isoform X1 [Cucurbita moschata]1.6e-1240.12Show/hide
Query:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------
        LPSCLHKFMS     LRNCKFLR+I  L Q +++MD +GCESLVRS DNVLDIISSKQ                                          
Subjt:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------

Query:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND
                                                AP STSEY WLVTTSSPTFSSSLVAND
Subjt:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND

XP_022946582.1 TMV resistance protein N-like isoform X2 [Cucurbita moschata]1.6e-1240.12Show/hide
Query:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------
        LPSCLHKFMS     LRNCKFLR+I  L Q +++MD +GCESLVRS DNVLDIISSKQ                                          
Subjt:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------

Query:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND
                                                AP STSEY WLVTTSSPTFSSSLVAND
Subjt:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND

XP_022946583.1 TMV resistance protein N-like isoform X3 [Cucurbita moschata]1.6e-1240.12Show/hide
Query:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------
        LPSCLHKFMS     LRNCKFLR+I  L Q +++MD +GCESLVRS DNVLDIISSKQ                                          
Subjt:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------

Query:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND
                                                AP STSEY WLVTTSSPTFSSSLVAND
Subjt:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND

XP_023537666.1 disease resistance protein RPS6-like isoform X1 [Cucurbita pepo subsp. pepo]4.6e-1238.32Show/hide
Query:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------
        LPSCLHKFMS     LRNCKFL++I NL Q +++MD +GCESLVRS DN+LDIISSKQ                                          
Subjt:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------

Query:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND
                                                AP STSEY WLVTTSSPTFSSSL  ND
Subjt:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND

TrEMBL top hitse value%identityAlignment
A0A5A7TWU2 TMV resistance protein N-like1.9e-1165.57Show/hide
Query:  YSFLPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ
        +S LPSCLHKFMS     L+NCKFL++I NL + ++KMD SGCESLVRS DN++DIIS KQ
Subjt:  YSFLPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ

A0A5D3D437 TMV resistance protein N-like1.9e-1165.57Show/hide
Query:  YSFLPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ
        +S LPSCLHKFMS     L+NCKFL++I NL + ++KMD SGCESLVRS DN++DIIS KQ
Subjt:  YSFLPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ

A0A6J1G421 TMV resistance protein N-like isoform X17.7e-1340.12Show/hide
Query:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------
        LPSCLHKFMS     LRNCKFLR+I  L Q +++MD +GCESLVRS DNVLDIISSKQ                                          
Subjt:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------

Query:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND
                                                AP STSEY WLVTTSSPTFSSSLVAND
Subjt:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND

A0A6J1G440 TMV resistance protein N-like isoform X27.7e-1340.12Show/hide
Query:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------
        LPSCLHKFMS     LRNCKFLR+I  L Q +++MD +GCESLVRS DNVLDIISSKQ                                          
Subjt:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------

Query:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND
                                                AP STSEY WLVTTSSPTFSSSLVAND
Subjt:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND

A0A6J1G4A0 TMV resistance protein N-like isoform X37.7e-1340.12Show/hide
Query:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------
        LPSCLHKFMS     LRNCKFLR+I  L Q +++MD +GCESLVRS DNVLDIISSKQ                                          
Subjt:  LPSCLHKFMS-----LRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQ------------------------------------------

Query:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND
                                                AP STSEY WLVTTSSPTFSSSLVAND
Subjt:  ----------------------------------------APSSTSEYRWLVTTSSPTFSSSLVAND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATATTATTCCTTTCTACCCTCATGTCTTCATAAGTTTATGTCCTTGAGGAATTGCAAGTTTCTTCGAAAAATTCTAAACCTTTCTCAGCGTATGAAAAAAATGGA
TGTCAGTGGTTGTGAATCGTTGGTTAGAAGTCTAGACAACGTTTTGGATATAATATCAAGCAAGCAGGCTCCATCATCAACATCAGAATATAGGTGGTTAGTAACAACTT
CTTCTCCAACATTTAGTAGCTCCTTAGTGGCGAATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATATTATTCCTTTCTACCCTCATGTCTTCATAAGTTTATGTCCTTGAGGAATTGCAAGTTTCTTCGAAAAATTCTAAACCTTTCTCAGCGTATGAAAAAAATGGA
TGTCAGTGGTTGTGAATCGTTGGTTAGAAGTCTAGACAACGTTTTGGATATAATATCAAGCAAGCAGGCTCCATCATCAACATCAGAATATAGGTGGTTAGTAACAACTT
CTTCTCCAACATTTAGTAGCTCCTTAGTGGCGAATGATTGA
Protein sequenceShow/hide protein sequence
MAYYSFLPSCLHKFMSLRNCKFLRKILNLSQRMKKMDVSGCESLVRSLDNVLDIISSKQAPSSTSEYRWLVTTSSPTFSSSLVAND