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CmoCh05G009120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G009120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTMV resistance protein N-like isoform X1
Genome locationCmo_Chr05:7017954..7018888
RNA-Seq ExpressionCmoCh05G009120
SyntenyCmoCh05G009120
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598998.1 Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia]4.0e-3063.3Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++  ++VNVT RS G+ L DEV GIQND++GQG               DVIKSF QEVSARSDC  MLH +NFP+EIDSKIQ LTNFPLHVTCYG+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAET
         GMEGMAET
Subjt:  RGMEGMAET

XP_022946582.1 TMV resistance protein N-like isoform X2 [Cucurbita moschata]4.0e-3063.3Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++  ++VNVT RS G+ L DEV GIQND++GQG               DVIKSF QEVSARSDC  MLH +NFP+EIDSKIQ LTNFPLHVTCYG+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAET
         GMEGMAET
Subjt:  RGMEGMAET

XP_023537666.1 disease resistance protein RPS6-like isoform X1 [Cucurbita pepo subsp. pepo]1.4e-3064.22Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++ S++VNVT RS G+ L DEV GIQND++GQG               DVIKSFAQEVSARSDC  MLH +NFP+EIDSKIQ L NFPLHVTCYG+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAET
         GMEGMAET
Subjt:  RGMEGMAET

XP_023537671.1 disease resistance protein RPS6-like isoform X5 [Cucurbita pepo subsp. pepo]1.4e-3064.22Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++ S++VNVT RS G+ L DEV GIQND++GQG               DVIKSFAQEVSARSDC  MLH +NFP+EIDSKIQ L NFPLHVTCYG+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAET
         GMEGMAET
Subjt:  RGMEGMAET

XP_023537672.1 disease resistance protein RPS6-like isoform X6 [Cucurbita pepo subsp. pepo]1.4e-3064.22Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++ S++VNVT RS G+ L DEV GIQND++GQG               DVIKSFAQEVSARSDC  MLH +NFP+EIDSKIQ L NFPLHVTCYG+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAET
         GMEGMAET
Subjt:  RGMEGMAET

TrEMBL top hitse value%identityAlignment
A0A0A0LLK3 TIR domain-containing protein4.6e-2453.98Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++   +  VT +  G+ L +EVHGIQNDV+G G               DVIKSF QEVSA+SDC  MLH ENFP+  DSK+QQ  NFPLHVT  G+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAETHSPN
        RGMEGMAET   N
Subjt:  RGMEGMAETHSPN

A0A5A7VCN0 TMV resistance protein N-like1.6e-2455.05Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++   +V VT +  G+ L +EVHGIQNDV+G G               DV+KSFAQEVSA+SDC  +LH ENFP+ IDSK+Q+  NFPLHVT  G+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAET
        RGMEGMAET
Subjt:  RGMEGMAET

A0A6J1G421 TMV resistance protein N-like isoform X11.9e-3063.3Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++  ++VNVT RS G+ L DEV GIQND++GQG               DVIKSF QEVSARSDC  MLH +NFP+EIDSKIQ LTNFPLHVTCYG+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAET
         GMEGMAET
Subjt:  RGMEGMAET

A0A6J1G440 TMV resistance protein N-like isoform X21.9e-3063.3Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++  ++VNVT RS G+ L DEV GIQND++GQG               DVIKSF QEVSARSDC  MLH +NFP+EIDSKIQ LTNFPLHVTCYG+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAET
         GMEGMAET
Subjt:  RGMEGMAET

A0A6J1G4A0 TMV resistance protein N-like isoform X31.9e-3063.3Show/hide
Query:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI
        +++  ++VNVT RS G+ L DEV GIQND++GQG               DVIKSF QEVSARSDC  MLH +NFP+EIDSKIQ LTNFPLHVTCYG+T I
Subjt:  DIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQG---------------DVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMI

Query:  RGMEGMAET
         GMEGMAET
Subjt:  RGMEGMAET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCATTGGTTGTGAATCATTGGTTAGAAGTCCCGACAACGTTTTGGATATAATATCAAGCAAGCAGGTTAATGTAACTAAAAGAAGCTATGGTATCGATCTCGT
CGATGAGGTCCATGGGATACAAAATGATGTTAGGGGTCAGGGGGATGTTATCAAATCCTTCGCTCAAGAAGTCTCCGCAAGATCAGATTGCAAAACAATGTTGCATGTAG
AGAACTTCCCAATTGAAATTGATTCCAAAATACAACAACTTACCAACTTTCCCTTACACGTAACATGTTATGGCATTACAATGATACGTGGCATGGAAGGCATGGCAGAG
ACACACTCGCCAAATCTATATTTGATAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCCATTGGTTGTGAATCATTGGTTAGAAGTCCCGACAACGTTTTGGATATAATATCAAGCAAGCAGGTTAATGTAACTAAAAGAAGCTATGGTATCGATCTCGT
CGATGAGGTCCATGGGATACAAAATGATGTTAGGGGTCAGGGGGATGTTATCAAATCCTTCGCTCAAGAAGTCTCCGCAAGATCAGATTGCAAAACAATGTTGCATGTAG
AGAACTTCCCAATTGAAATTGATTCCAAAATACAACAACTTACCAACTTTCCCTTACACGTAACATGTTATGGCATTACAATGATACGTGGCATGGAAGGCATGGCAGAG
ACACACTCGCCAAATCTATATTTGATAAACTAA
Protein sequenceShow/hide protein sequence
MDAIGCESLVRSPDNVLDIISSKQVNVTKRSYGIDLVDEVHGIQNDVRGQGDVIKSFAQEVSARSDCKTMLHVENFPIEIDSKIQQLTNFPLHVTCYGITMIRGMEGMAE
THSPNLYLIN