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CmoCh05G009140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G009140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiondisease resistance protein RPP4-like
Genome locationCmo_Chr05:7019882..7020525
RNA-Seq ExpressionCmoCh05G009140
SyntenyCmoCh05G009140
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598998.1 Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia]5.8e-1660.24Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI LDDVDKLEQLEALVG HD FG+GS+II+TTR+NHL+S HEFDQ +
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

KAG6599275.1 Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1663.86Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI LDDVDKLEQLEALVGG D FG GS+II+TTR+NHLLSIHEFDQ Y
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

XP_023537666.1 disease resistance protein RPS6-like isoform X1 [Cucurbita pepo subsp. pepo]5.8e-1660.24Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI LDDVDKLEQLEALVG HD FG+GS+II+TTR+NHL+S HEFDQ +
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

XP_023537672.1 disease resistance protein RPS6-like isoform X6 [Cucurbita pepo subsp. pepo]5.8e-1660.24Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI LDDVDKLEQLEALVG HD FG+GS+II+TTR+NHL+S HEFDQ +
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

XP_023545380.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111804816 [Cucurbita pepo subsp. pepo]2.6e-1661.45Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI +DDVDKLEQLEALVGGHD FG GS+II+TTR+NHL+S HEFDQ Y
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

TrEMBL top hitse value%identityAlignment
A0A6J1G3D0 TMV resistance protein N-like isoform X11.1e-1560.24Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI +DDVDKLEQLEALVGGHD FG GS+II+TTR+N L+S HEFDQ Y
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

A0A6J1G421 TMV resistance protein N-like isoform X12.8e-1660.24Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI LDDVDKLEQLEALVG HD FG+GS+II+TTR+NHL+S HEFDQ +
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

A0A6J1G440 TMV resistance protein N-like isoform X22.8e-1660.24Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI LDDVDKLEQLEALVG HD FG+GS+II+TTR+NHL+S HEFDQ +
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

A0A6J1G4A0 TMV resistance protein N-like isoform X32.8e-1660.24Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI LDDVDKLEQLEALVG HD FG+GS+II+TTR+NHL+S HEFDQ +
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

A0A6J1G518 LOW QUALITY PROTEIN: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like4.8e-1659.04Show/hide
Query:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++E LLHEILKED K+                 KVLI +D+VDK EQLEALVGGHD FG GS+II+TTR+NHL+S+HEFDQ Y
Subjt:  MEEILLHEILKEDSKI----------------LKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

SwissProt top hitse value%identityAlignment
A0A290U7C4 Disease resistance protein Roq12.6e-0646.88Show/hide
Query:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPYWDKKL
        ILK      KVL+ LDDV+  +QL+ LVG  D FG GS I++TTR   LL  H+  + Y  K L
Subjt:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPYWDKKL

F4JNA9 Disease resistance protein RPP42.0e-0649.15Show/hide
Query:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++++  K  KVLI LDDVD LE L+ LVG  + FG GS II+ T+   LL  HE D  Y
Subjt:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

F4JWM0 Disease resistance-like protein DSC21.3e-0552Show/hide
Query:  KVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        KVL+ LD VD+LEQL AL      FG GS II+TT+   LL  HE +  Y
Subjt:  KVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

O23530 Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 12.6e-0649.15Show/hide
Query:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++++  K  KVLI LDDVD LE L+ LVG  + FG GS II+ T+   LL  HE D  Y
Subjt:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

V9M2S5 Disease resistance protein RPV18.8e-0750Show/hide
Query:  KVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        +V I LDDVD L QLE L+G  +  G GS +I+TTR+ H+L++ E D  Y
Subjt:  KVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

Arabidopsis top hitse value%identityAlignment
AT1G27180.1 disease resistance protein (TIR-NBS-LRR class), putative6.2e-0842.42Show/hide
Query:  EILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPYWDKKLT
        E +KE+    K+++ LDDVD ++Q+ ALVG    +G GS+I++TTR + +LS    +Q Y  K LT
Subjt:  EILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPYWDKKLT

AT1G72900.1 Toll-Interleukin-Resistance (TIR) domain-containing protein2.8e-0847.62Show/hide
Query:  KEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPYWDKKLT
        K+  K  KVL+  DDVDKLEQL+AL G    FG GSV+I+TT+   LL  +     Y  + LT
Subjt:  KEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPYWDKKLT

AT5G18360.1 Disease resistance protein (TIR-NBS-LRR class) family1.6e-0856.6Show/hide
Query:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIH
        ++KE  + LKVL+ LDDVDKLEQL+ALV     FG GS II+TT +  LL  H
Subjt:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIH

AT5G51630.1 Disease resistance protein (TIR-NBS-LRR class) family1.1e-0750.85Show/hide
Query:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++K+  K  KVLI LDDVD LE L+ LVG    FG GS II+TT+   LL  H+ D  Y
Subjt:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY

AT5G51630.2 Disease resistance protein (TIR-NBS-LRR class) family1.1e-0750.85Show/hide
Query:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY
        ++K+  K  KVLI LDDVD LE L+ LVG    FG GS II+TT+   LL  H+ D  Y
Subjt:  ILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAATCCTACTCCATGAGATCTTAAAGGAAGATTCGAAGATTTTAAAAGTTCTTATAACTCTTGACGATGTGGATAAGCTTGAGCAACTAGAAGCATTGGTTGG
TGGACATGATCGGTTTGGCCTTGGTAGTGTAATCATTATGACAACAAGAAGCAACCATTTACTTTCTATCCATGAATTTGATCAGCCGTATTGGGATAAAAAGTTGACTT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAATCCTACTCCATGAGATCTTAAAGGAAGATTCGAAGATTTTAAAAGTTCTTATAACTCTTGACGATGTGGATAAGCTTGAGCAACTAGAAGCATTGGTTGG
TGGACATGATCGGTTTGGCCTTGGTAGTGTAATCATTATGACAACAAGAAGCAACCATTTACTTTCTATCCATGAATTTGATCAGCCGTATTGGGATAAAAAGTTGACTT
AA
Protein sequenceShow/hide protein sequence
MEEILLHEILKEDSKILKVLITLDDVDKLEQLEALVGGHDRFGLGSVIIMTTRSNHLLSIHEFDQPYWDKKLT