; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh05G009180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh05G009180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAP2-like ethylene-responsive transcription factor
Genome locationCmo_Chr05:7074597..7075169
RNA-Seq ExpressionCmoCh05G009180
SyntenyCmoCh05G009180
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599026.1 Ethylene-responsive transcription factor WRI1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5784Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
        YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG

Query:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA
        NAEMEEEYSMDE                     GTTNLSLSTPFHYSALA
Subjt:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA

KAG7029983.1 AP2-like ethylene-responsive transcription factor BBM2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-7396.67Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
        YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSI TNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG

Query:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA
        +AEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA
Subjt:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA

XP_022946897.1 ethylene-responsive transcription factor WRI1-like [Cucurbita moschata]9.2e-7598Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
        YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG

Query:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA
        NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA
Subjt:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA

XP_022998979.1 ethylene-responsive transcription factor WRI1-like [Cucurbita maxima]1.4e-7093.29Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
        YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL PNPMQPSPPLSFSIDTNTTSN+AFIPTAP+TSPRTALGLLLKSSLFKHLMEKNVVNVNG
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG

Query:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSAL
        +AEMEEEY MDEGRALLSFV+PNPYLHLQYSCQGTTNLSLSTPFHY AL
Subjt:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSAL

XP_023546415.1 ethylene-responsive transcription factor WRI1-like [Cucurbita pepo subsp. pepo]4.3e-7294.67Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
        YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAF PTAP+TSPRTALGLLLKSSLFKHLMEKNVVNVNG
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG

Query:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA
        + EMEEEY MDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA
Subjt:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA

TrEMBL top hitse value%identityAlignment
A0A0A0KJ57 Uncharacterized protein4.2e-4160.99Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLK----PNPMQP-SPPLS---FSIDTNTTS---------------------NNAFIPTAPQ
        YL T STQEEAARAYDIAAIEYRG+NAVTNF+LS+YIRWLK    PNP Q  SPP+S   F ID NT +                     NN  IPT PQ
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLK----PNPMQP-SPPLS---FSIDTNTTS---------------------NNAFIPTAPQ

Query:  TSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFVEP---NPYLHLQYSCQGTTNLSLS-TPFHYSAL
        TSPRTALGLLLKSSLFKHL+EKN+VNVN     EE+   +E R LL FV+    NPY +L Y CQGTTNLSLS TPFH+S L
Subjt:  TSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFVEP---NPYLHLQYSCQGTTNLSLS-TPFHYSAL

A0A1S3C431 AP2-like ethylene-responsive transcription factor At1g797003.4e-3856.99Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLK--------PNPMQP-SPPL---SFSIDTNTTS----------------------NNAFI
        YL T STQEEAARAYDIAAIEYRG+NAVTNF+L++YIRWLK        PNP Q  SPP+    F ID NT +                      N+  I
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLK--------PNPMQP-SPPL---SFSIDTNTTS----------------------NNAFI

Query:  PTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFVEP--NPYLHLQYSCQGTTNLSLS-TPFHYSAL
        PT PQTSPRTALGLLLKSSLFKHL+EKN+VN N     EE+   +E R LL FV+   NPY +L Y C GTTNLSLS TPFH+S L
Subjt:  PTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFVEP--NPYLHLQYSCQGTTNLSLS-TPFHYSAL

A0A6J1DD61 ethylene-responsive transcription factor WRI1-like1.6e-1955.46Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNT-----TSNNAFIPTAPQT----SPRTALGLLLKSSLFKHLM
        YL T STQEEAARAYD+AAIEYRG+NAVTNFELSSYI WLKP+    S   + SI  +      T+   F  TA  T    + RTALGLLLKSS+F+ L+
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNT-----TSNNAFIPTAPQT----SPRTALGLLLKSSLFKHLM

Query:  EKNVVNVNGNAEMEEEYSM
        +KNV+N++G+ + E++ SM
Subjt:  EKNVVNVNGNAEMEEEYSM

A0A6J1G4W8 ethylene-responsive transcription factor WRI1-like4.5e-7598Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
        YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG

Query:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA
        NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA
Subjt:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA

A0A6J1KFT6 ethylene-responsive transcription factor WRI1-like6.7e-7193.29Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG
        YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL PNPMQPSPPLSFSIDTNTTSN+AFIPTAP+TSPRTALGLLLKSSLFKHLMEKNVVNVNG
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG

Query:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSAL
        +AEMEEEY MDEGRALLSFV+PNPYLHLQYSCQGTTNLSLSTPFHY AL
Subjt:  NAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSAL

SwissProt top hitse value%identityAlignment
A0JPZ8 AP2-like ethylene-responsive transcription factor At1g797003.8e-0776.32Show/hide
Query:  STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPN
        +TQEEAA AYDIAAIEYRGLNAVTNF++S   R+L PN
Subjt:  STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPN

Q1PFE1 AP2-like ethylene-responsive transcription factor AIL11.1e-0675Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSY
        YL T STQEEAA AYDIAAI++RGLNAVTNF+++ Y
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSY

Q6PQQ3 AP2-like ethylene-responsive transcription factor AIL55.0e-0777.78Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSY
        YL T STQEEAA AYDIAAI++RGLNAVTNF++S Y
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSY

Q6X5Y6 Ethylene-responsive transcription factor WRI12.0e-0865.31Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP
        YL T +TQEEAA AYD+AAIEYRG NAVTNF++S+YI  LK   + P P
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP

Q94AN4 AP2-like ethylene-responsive transcription factor At1g160605.9e-0869.57Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKP-NPM
        YL T +TQEEAA AYDIAAIEYRGLNAVTNF++S Y++   P NP+
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKP-NPM

Arabidopsis top hitse value%identityAlignment
AT1G16060.1 ARIA-interacting double AP2 domain protein4.2e-0969.57Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKP-NPM
        YL T +TQEEAA AYDIAAIEYRGLNAVTNF++S Y++   P NP+
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKP-NPM

AT1G16060.2 ARIA-interacting double AP2 domain protein4.2e-0969.57Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKP-NPM
        YL T +TQEEAA AYDIAAIEYRGLNAVTNF++S Y++   P NP+
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKP-NPM

AT3G54320.1 Integrase-type DNA-binding superfamily protein1.4e-0965.31Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP
        YL T +TQEEAA AYD+AAIEYRG NAVTNF++S+YI  LK   + P P
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP

AT3G54320.2 Integrase-type DNA-binding superfamily protein1.4e-0965.31Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP
        YL T +TQEEAA AYD+AAIEYRG NAVTNF++S+YI  LK   + P P
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP

AT3G54320.3 Integrase-type DNA-binding superfamily protein1.4e-0965.31Show/hide
Query:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP
        YL T +TQEEAA AYD+AAIEYRG NAVTNF++S+YI  LK   + P P
Subjt:  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTGGGAAGCAAGAATTGGAAGAGTATTTGGCAACAAGTACACAAGAGGAGGCAGCGAGGGCATACGACATAGCAGCAATCGAATATAGAGGCCTCAACGCAGT
GACCAACTTCGAGTTGAGCAGCTACATAAGGTGGCTTAAGCCAAACCCAATGCAGCCTTCTCCACCATTGTCCTTTTCAATTGATACCAATACTACGAGTAATAACGCAT
TTATTCCGACCGCCCCACAAACGTCCCCTCGCACAGCGCTTGGCCTTCTCCTCAAGTCGTCCCTCTTCAAACATCTTATGGAGAAGAACGTTGTGAATGTCAATGGAAAT
GCCGAAATGGAAGAGGAGTACTCCATGGATGAAGGTAGAGCGCTACTCTCCTTTGTTGAACCTAATCCTTACTTGCACTTGCAATATTCATGTCAAGGAACCACCAACTT
GTCACTCTCTACCCCTTTTCATTACTCCGCCTTGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGTGGGAAGCAAGAATTGGAAGAGTATTTGGCAACAAGTACACAAGAGGAGGCAGCGAGGGCATACGACATAGCAGCAATCGAATATAGAGGCCTCAACGCAGT
GACCAACTTCGAGTTGAGCAGCTACATAAGGTGGCTTAAGCCAAACCCAATGCAGCCTTCTCCACCATTGTCCTTTTCAATTGATACCAATACTACGAGTAATAACGCAT
TTATTCCGACCGCCCCACAAACGTCCCCTCGCACAGCGCTTGGCCTTCTCCTCAAGTCGTCCCTCTTCAAACATCTTATGGAGAAGAACGTTGTGAATGTCAATGGAAAT
GCCGAAATGGAAGAGGAGTACTCCATGGATGAAGGTAGAGCGCTACTCTCCTTTGTTGAACCTAATCCTTACTTGCACTTGCAATATTCATGTCAAGGAACCACCAACTT
GTCACTCTCTACCCCTTTTCATTACTCCGCCTTGGCTTGA
Protein sequenceShow/hide protein sequence
MGGGKQELEEYLATSTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGN
AEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA